RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 LRRC2Q9BYS8 371 aa9.4□□□□□ -0.9
CLK4-203ENST00000519583 CYP7A1P22680 504 aa9.4□□□□□ -0.9
CLK4-203ENST00000519583 HAND2P61296 217 aa9.4□□□□□ -0.9
CLK4-203ENST00000519583 RASA3Q14644 834 aa9.4□□□□□ -0.9
CLK4-203ENST00000519583 UBE3CQ15386 1083 aa9.4□□□□□ -0.9
CLK4-203ENST00000519583 CST9Q5W186 159 aa9.4□□□□□ -0.9
CLK4-203ENST00000519583 Q6ZUG5 572 aa9.4□□□□□ -0.9
CLK4-203ENST00000519583 NOL10Q9BSC4 688 aaKnown RBP9.4□□□□□ -0.9
CLK4-203ENST00000519583 ABT1Q9ULW3 272 aaKnown RBP9.4□□□□□ -0.9
CLK4-203ENST00000519583 E7EWF7 191 aa9.4□□□□□ -0.91
CLK4-203ENST00000519583 PTMSP20962 102 aa9.4□□□□□ -0.91
CLK4-203ENST00000519583 TNNI2P48788 182 aa9.4□□□□□ -0.91
CLK4-203ENST00000519583 MYO5AQ9Y4I1 1855 aaKnown RBP9.39□□□□□ -0.91
CLK4-203ENST00000519583 GPR75-ASB3A0A0A6YYF3 556 aa9.39□□□□□ -0.91
CLK4-203ENST00000519583 TCRBV5S4A2TA0A5A2 114 aa9.39□□□□□ -0.91
CLK4-203ENST00000519583 FGAP02671 866 aa9.39□□□□□ -0.91
CLK4-203ENST00000519583 GJB2P29033 226 aa9.39□□□□□ -0.91
CLK4-203ENST00000519583 STK3Q13188 491 aa9.39□□□□□ -0.91
CLK4-203ENST00000519583 AATFQ9NY61 560 aaKnown RBP eCLIP9.39□□□□□ -0.91
CLK4-203ENST00000519583 CTNNA3Q9UI47 895 aa9.39□□□□□ -0.91
CLK4-203ENST00000519583 ECM29Q5VYK3 1845 aa9.39□□□□□ -0.91
CLK4-203ENST00000519583 WDR33Q9C0J8 1336 aaKnown RBP9.39□□□□□ -0.91
CLK4-203ENST00000519583 NF2P35240 595 aa9.39□□□□□ -0.91
CLK4-203ENST00000519583 TCP10Q12799 353 aa9.39□□□□□ -0.91
CLK4-203ENST00000519583 DHX32Q7L7V1 743 aaKnown RBP9.39□□□□□ -0.91
CLK4-203ENST00000519583 ADGRA1Q86SQ6 560 aa9.39□□□□□ -0.91
CLK4-203ENST00000519583 CREBZFQ9NS37 354 aa9.39□□□□□ -0.91
CLK4-203ENST00000519583 PPP2R3BQ9Y5P8 575 aa9.39□□□□□ -0.91
CLK4-203ENST00000519583 HMGB1P09429 215 aaKnown RBP9.39□□□□□ -0.91
CLK4-203ENST00000519583 SYT1P21579 422 aa9.39□□□□□ -0.91
CLK4-203ENST00000519583 FGD1P98174 961 aa9.39□□□□□ -0.91
CLK4-203ENST00000519583 NFIAQ12857 509 aa9.39□□□□□ -0.91
CLK4-203ENST00000519583 IMMTQ16891 758 aaKnown RBP9.39□□□□□ -0.91
CLK4-203ENST00000519583 FOXD4L6Q3SYB3 417 aaPredicted RBP9.39□□□□□ -0.91
CLK4-203ENST00000519583 FOXD4L3Q6VB84 417 aaPredicted RBP9.39□□□□□ -0.91
CLK4-203ENST00000519583 MIGA1Q8NAN2 632 aa9.39□□□□□ -0.91
CLK4-203ENST00000519583 BRF1Q92994 677 aa9.39□□□□□ -0.91
CLK4-203ENST00000519583 TMEM39BQ9GZU3 492 aa9.39□□□□□ -0.91
CLK4-203ENST00000519583 IGSF3O75054 1194 aa9.38□□□□□ -0.91
CLK4-203ENST00000519583 BAG3O95817 575 aa9.38□□□□□ -0.91
CLK4-203ENST00000519583 PRKG1Q13976 671 aa9.38□□□□□ -0.91
CLK4-203ENST00000519583 TTLL12Q14166 644 aaPredicted RBP9.38□□□□□ -0.91
CLK4-203ENST00000519583 SKOR2Q2VWA4 1001 aaPredicted RBP9.38□□□□□ -0.91
CLK4-203ENST00000519583 C2orf69Q8N8R5 385 aa9.38□□□□□ -0.91
CLK4-203ENST00000519583 GBA2Q9HCG7 927 aaPredicted RBP9.38□□□□□ -0.91
CLK4-203ENST00000519583 LMBRD1Q9NUN5 540 aa9.38□□□□□ -0.91
CLK4-203ENST00000519583 TRPM7Q96QT4 1865 aa9.38□□□□□ -0.91
CLK4-203ENST00000519583 STX6O43752 255 aa9.38□□□□□ -0.91
CLK4-203ENST00000519583 PICALMQ13492 652 aa9.38□□□□□ -0.91
CLK4-203ENST00000519583 NBPF12Q5TAG4 269 aaPredicted RBP9.38□□□□□ -0.91
CLK4-203ENST00000519583 FKBP1CQ5VVH2 108 aa9.38□□□□□ -0.91
CLK4-203ENST00000519583 PRPF40AO75400 957 aaKnown RBP9.37□□□□□ -0.91
CLK4-203ENST00000519583 RHBDL3P58872 404 aa9.37□□□□□ -0.91
CLK4-203ENST00000519583 EXOSC10Q01780 885 aaKnown RBP9.37□□□□□ -0.91
CLK4-203ENST00000519583 CHST3Q7LGC8 479 aa9.37□□□□□ -0.91
CLK4-203ENST00000519583 CDAN1Q8IWY9 1227 aa9.37□□□□□ -0.91
CLK4-203ENST00000519583 TEX11Q8IYF3 940 aa9.37□□□□□ -0.91
CLK4-203ENST00000519583 AIDAQ96BJ3 306 aa9.37□□□□□ -0.91
CLK4-203ENST00000519583 CNTNAP1P78357 1384 aa9.37□□□□□ -0.91
CLK4-203ENST00000519583 MAST2Q6P0Q8 1798 aa9.37□□□□□ -0.91
CLK4-203ENST00000519583 MBD4O95243 580 aa9.37□□□□□ -0.91
CLK4-203ENST00000519583 APPP05067 770 aa9.37□□□□□ -0.91
CLK4-203ENST00000519583 DYNLL1P63167 89 aaKnown RBP9.37□□□□□ -0.91
CLK4-203ENST00000519583 SUPT20HL1Q3ZLR7 823 aa9.37□□□□□ -0.91
CLK4-203ENST00000519583 PAXIP1Q6ZW49 1069 aaPredicted RBP9.37□□□□□ -0.91
CLK4-203ENST00000519583 FAM83AQ86UY5 434 aa9.37□□□□□ -0.91
CLK4-203ENST00000519583 SH3RF3Q8TEJ3 882 aaPredicted RBP9.37□□□□□ -0.91
CLK4-203ENST00000519583 FAM198AQ9UFP1 575 aa9.37□□□□□ -0.91
CLK4-203ENST00000519583 DDX49Q9Y6V7 483 aaKnown RBP9.37□□□□□ -0.91
CLK4-203ENST00000519583 MYH7P12883 1935 aa9.37□□□□□ -0.91
CLK4-203ENST00000519583 WDHD1O75717 1129 aaPredicted RBP9.37□□□□□ -0.91
CLK4-203ENST00000519583 ZSCAN22P10073 491 aaPredicted RBP9.37□□□□□ -0.91
CLK4-203ENST00000519583 PLCG2P16885 1265 aa9.37□□□□□ -0.91
CLK4-203ENST00000519583 MOB2Q70IA6 237 aa9.37□□□□□ -0.91
CLK4-203ENST00000519583 FAM151AQ8WW52 585 aa9.37□□□□□ -0.91
CLK4-203ENST00000519583 STRBPQ96SI9 672 aaKnown RBP9.37□□□□□ -0.91
CLK4-203ENST00000519583 MKRN1Q9UHC7 482 aaKnown RBP9.37□□□□□ -0.91
CLK4-203ENST00000519583 FZD1Q9UP38 647 aa9.37□□□□□ -0.91
CLK4-203ENST00000519583 DOCK2Q92608 1830 aa9.36□□□□□ -0.91
CLK4-203ENST00000519583 ZNF213O14771 459 aa9.36□□□□□ -0.91
CLK4-203ENST00000519583 HUNKP57058 714 aa9.36□□□□□ -0.91
CLK4-203ENST00000519583 PPP4CP60510 307 aa9.36□□□□□ -0.91
CLK4-203ENST00000519583 ZSCAN29Q8IWY8 852 aaPredicted RBP9.36□□□□□ -0.91
CLK4-203ENST00000519583 ZFPM1Q8IX07 1006 aa9.36□□□□□ -0.91
CLK4-203ENST00000519583 GTF3C6Q969F1 213 aa9.36□□□□□ -0.91
CLK4-203ENST00000519583 TEPSINQ96N21 525 aa9.36□□□□□ -0.91
CLK4-203ENST00000519583 IDI2Q9BXS1 227 aa9.36□□□□□ -0.91
CLK4-203ENST00000519583 DDX4Q9NQI0 724 aaKnown RBP9.36□□□□□ -0.91
CLK4-203ENST00000519583 TLL2Q9Y6L7 1015 aa9.36□□□□□ -0.91
CLK4-203ENST00000519583 APOBRQ0VD83 1088 aa9.36□□□□□ -0.91
CLK4-203ENST00000519583 TMED8Q6PL24 325 aaPredicted RBP9.36□□□□□ -0.91
CLK4-203ENST00000519583 SAPCD2Q86UD0 394 aa9.36□□□□□ -0.91
CLK4-203ENST00000519583 ARMT1Q9H993 441 aa9.36□□□□□ -0.91
CLK4-203ENST00000519583 MAGEB6P1A0A0J9YX57 407 aa9.36□□□□□ -0.91
CLK4-203ENST00000519583 GRM1Q13255 1194 aa9.36□□□□□ -0.91
CLK4-203ENST00000519583 KLHL40Q2TBA0 621 aa9.36□□□□□ -0.91
CLK4-203ENST00000519583 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.36□□□□□ -0.91
CLK4-203ENST00000519583 ANGEL1Q9UNK9 670 aaKnown RBP9.36□□□□□ -0.91
CLK4-203ENST00000519583 MTMR6Q9Y217 621 aa9.36□□□□□ -0.91
CLK4-203ENST00000519583 VPS37CA5D8V6 355 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms