RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 OR8K1Q8NGG5 319 aa9.59□□□□□ -0.87
PCM1-212ENST00000519253 JAKMIP2Q96AA8 810 aa9.59□□□□□ -0.87
PCM1-212ENST00000519253 FAN1Q9Y2M0 1017 aa9.59□□□□□ -0.87
PCM1-212ENST00000519253 MUM1L1Q5H9M0 696 aa9.58□□□□□ -0.88
PCM1-212ENST00000519253 PHKBQ93100 1093 aa9.58□□□□□ -0.88
PCM1-212ENST00000519253 CTNND2Q9UQB3 1225 aa9.58□□□□□ -0.88
PCM1-212ENST00000519253 H2AFXP16104 143 aaPredicted RBP9.58□□□□□ -0.88
PCM1-212ENST00000519253 CCDC178Q5BJE1 867 aa9.58□□□□□ -0.88
PCM1-212ENST00000519253 SPECC1Q5M775 1068 aa9.58□□□□□ -0.88
PCM1-212ENST00000519253 CALML4Q96GE6 196 aa9.58□□□□□ -0.88
PCM1-212ENST00000519253 FAM204AQ9H8W3 233 aa9.58□□□□□ -0.88
PCM1-212ENST00000519253 TRMT112Q9UI30 125 aaKnown RBP9.58□□□□□ -0.88
PCM1-212ENST00000519253 MAGEA9P43362 315 aa9.58□□□□□ -0.88
PCM1-212ENST00000519253 LRRC27Q9C0I9 530 aa9.58□□□□□ -0.88
PCM1-212ENST00000519253 JRKLQ9Y4A0 524 aa9.58□□□□□ -0.88
PCM1-212ENST00000519253 GOLGA6L10A0A0M3HER8 536 aa9.58□□□□□ -0.88
PCM1-212ENST00000519253 GCP02774 474 aa9.58□□□□□ -0.88
PCM1-212ENST00000519253 ADGRL3Q9HAR2 1447 aa9.58□□□□□ -0.88
PCM1-212ENST00000519253 IQCDQ96DY2 449 aa9.58□□□□□ -0.88
PCM1-212ENST00000519253 XAGE2Q96GT9 111 aa9.58□□□□□ -0.88
PCM1-212ENST00000519253 SLC4A4Q9Y6R1 1079 aa9.58□□□□□ -0.88
PCM1-212ENST00000519253 PXDNLA1KZ92 1463 aa9.58□□□□□ -0.88
PCM1-212ENST00000519253 PPFIA4O75335 1185 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 ADD1P35611 737 aaKnown RBP9.57□□□□□ -0.88
PCM1-212ENST00000519253 DNA2P51530 1060 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 SECISBP2LQ93073 1101 aaKnown RBP9.57□□□□□ -0.88
PCM1-212ENST00000519253 BCCIPQ9P287 314 aaKnown RBP eCLIP9.57□□□□□ -0.88
PCM1-212ENST00000519253 VIRMAQ69YN4 1812 aaKnown RBP9.57□□□□□ -0.88
PCM1-212ENST00000519253 TBC1D8BQ0IIM8 1120 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 SND1Q7KZF4 910 aaKnown RBP eCLIP9.57□□□□□ -0.88
PCM1-212ENST00000519253 CCDC114Q96M63 670 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 FGAP02671 866 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 CASP8Q14790 479 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 TMEM266Q2M3C6 531 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 IFIT1BQ5T764 474 aaKnown RBP9.57□□□□□ -0.88
PCM1-212ENST00000519253 USPL1Q5W0Q7 1092 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 ANKRD18AQ8IVF6 992 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 TMEM2Q9UHN6 1383 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 PTPRMP28827 1452 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 ICE2Q659A1 982 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 SLC35F6Q8N357 371 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 ZBTB9Q96C00 473 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 CLIC6Q96NY7 704 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 GSDMAQ96QA5 445 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 TAB2Q9NYJ8 693 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 GOLGA8KD6RF30 607 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 MAP2K2P36507 400 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 TNNC1P63316 161 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 C8orf74Q6P047 294 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 TAX1BP1Q86VP1 789 aa9.57□□□□□ -0.88
PCM1-212ENST00000519253 VWA3AA6NCI4 1184 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 SSBP05455 408 aaKnown RBP eCLIP9.56□□□□□ -0.88
PCM1-212ENST00000519253 RBM28Q9NW13 759 aaKnown RBP9.56□□□□□ -0.88
PCM1-212ENST00000519253 PSD3Q9NYI0 1048 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 FBXO3Q9UK99 471 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 MYOM1P52179 1685 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 HECW2Q9P2P5 1572 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 MACROD2A1Z1Q3 448 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 ZNF827Q17R98 1081 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 PROSER3Q2NL68 480 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 CCDC40Q4G0X9 1142 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 NBPF14Q5TI25 921 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 IFT20Q8IY31 132 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 SLC52A2Q9HAB3 445 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 ZCCHC17Q9NP64 241 aaKnown RBP9.56□□□□□ -0.88
PCM1-212ENST00000519253 PRDM11Q9NQV5 511 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 MRFAP1Q9Y605 127 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 MAST3O60307 1309 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 GOLGA8FQ08AF8 430 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 GOLGA8DPQ0D2H9 430 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 GIGYF2Q6Y7W6 1299 aaKnown RBP9.56□□□□□ -0.88
PCM1-212ENST00000519253 EPN1Q9Y6I3 576 aaPredicted RBP9.56□□□□□ -0.88
PCM1-212ENST00000519253 RNF40O75150 1001 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 BCAS4Q8TDM0 211 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.56□□□□□ -0.88
PCM1-212ENST00000519253 ZNF287Q9HBT7 754 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 ST7Q9NRC1 585 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 GCOM1H8Y6P7 765 aaPredicted RBP9.56□□□□□ -0.88
PCM1-212ENST00000519253 MYZAPP0CAP1 466 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 GBP2P32456 591 aaPredicted RBP9.56□□□□□ -0.88
PCM1-212ENST00000519253 GNAQP50148 359 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 SELENOOQ9BVL4 669 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 ABCB6Q9NP58 842 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 TMOD3Q9NYL9 352 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 CAVIN4Q5BKX8 364 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 CCDC50Q8IVM0 306 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 CAPS2Q9BXY5 557 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 MMRN2Q9H8L6 949 aa9.56□□□□□ -0.88
PCM1-212ENST00000519253 CASP14P31944 242 aa9.55□□□□□ -0.88
PCM1-212ENST00000519253 ASIC1P78348 528 aa9.55□□□□□ -0.88
PCM1-212ENST00000519253 MAP2K1Q02750 393 aaPredicted RBP9.55□□□□□ -0.88
PCM1-212ENST00000519253 KRT28Q7Z3Y7 464 aa9.55□□□□□ -0.88
PCM1-212ENST00000519253 DYDC1Q8WWB3 177 aa9.55□□□□□ -0.88
PCM1-212ENST00000519253 TSKSQ9UJT2 592 aa9.55□□□□□ -0.88
PCM1-212ENST00000519253 PLEKHG1Q9ULL1 1385 aa9.55□□□□□ -0.88
PCM1-212ENST00000519253 IBSPP21815 317 aaPredicted RBP9.55□□□□□ -0.88
PCM1-212ENST00000519253 PTPN12Q05209 780 aaKnown RBP9.55□□□□□ -0.88
PCM1-212ENST00000519253 ARHGEF25Q86VW2 580 aa9.55□□□□□ -0.88
PCM1-212ENST00000519253 ENGASEQ8NFI3 743 aa9.55□□□□□ -0.88
PCM1-212ENST00000519253 TRIM58Q8NG06 486 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms