RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 NBR1Q14596 966 aa17.66■□□□□ 0.42
TRAPPC9-205ENST00000518839 CPLX2Q6PUV4 134 aaKnown RBP17.66■□□□□ 0.42
TRAPPC9-205ENST00000518839 KIAA0825Q8IV33 1275 aa17.66■□□□□ 0.42
TRAPPC9-205ENST00000518839 MXD3Q9BW11 206 aa17.66■□□□□ 0.42
TRAPPC9-205ENST00000518839 INCENPQ9NQS7 918 aa17.66■□□□□ 0.42
TRAPPC9-205ENST00000518839 KCNQ5Q9NR82 932 aa17.66■□□□□ 0.42
TRAPPC9-205ENST00000518839 ZNF277Q9NRM2 450 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC9-205ENST00000518839 USP40Q9NVE5 1235 aa17.66■□□□□ 0.42
TRAPPC9-205ENST00000518839 BRPF3Q9ULD4 1205 aa17.66■□□□□ 0.42
TRAPPC9-205ENST00000518839 ZNRF3Q9ULT6 936 aa17.66■□□□□ 0.42
TRAPPC9-205ENST00000518839 MYH8P13535 1937 aa17.66■□□□□ 0.42
TRAPPC9-205ENST00000518839 NID2Q14112 1375 aa17.66■□□□□ 0.42
TRAPPC9-205ENST00000518839 ZBTB43O43298 467 aa17.65■□□□□ 0.42
TRAPPC9-205ENST00000518839 RANBP6O60518 1105 aaKnown RBP17.65■□□□□ 0.42
TRAPPC9-205ENST00000518839 SYT1P21579 422 aa17.65■□□□□ 0.42
TRAPPC9-205ENST00000518839 SCNN1DP51172 638 aa17.65■□□□□ 0.42
TRAPPC9-205ENST00000518839 RSBN1LQ6PCB5 846 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC9-205ENST00000518839 APOA5Q6Q788 366 aa17.65■□□□□ 0.42
TRAPPC9-205ENST00000518839 TTC6Q86TZ1 520 aa17.65■□□□□ 0.42
TRAPPC9-205ENST00000518839 FAM184AQ8NB25 1140 aa17.65■□□□□ 0.42
TRAPPC9-205ENST00000518839 NSUN7Q8NE18 718 aaKnown RBP17.65■□□□□ 0.42
TRAPPC9-205ENST00000518839 ZSCAN10Q96SZ4 725 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC9-205ENST00000518839 GPHNQ9NQX3 736 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC9-205ENST00000518839 HDAC9Q9UKV0 1011 aa17.65■□□□□ 0.42
TRAPPC9-205ENST00000518839 TAOK2Q9UL54 1235 aa17.65■□□□□ 0.42
TRAPPC9-205ENST00000518839 ATP6V1DQ9Y5K8 247 aa17.65■□□□□ 0.42
TRAPPC9-205ENST00000518839 SLC12A7Q9Y666 1083 aa17.65■□□□□ 0.42
TRAPPC9-205ENST00000518839 CPLX1O14810 134 aa17.64■□□□□ 0.41
TRAPPC9-205ENST00000518839 NPM3O75607 178 aaKnown RBP17.64■□□□□ 0.41
TRAPPC9-205ENST00000518839 CDKL5O76039 1030 aa17.64■□□□□ 0.41
TRAPPC9-205ENST00000518839 VIL1P09327 827 aaKnown RBP17.64■□□□□ 0.41
TRAPPC9-205ENST00000518839 CYP2D6P10635 497 aa17.64■□□□□ 0.41
TRAPPC9-205ENST00000518839 MMP14P50281 582 aa17.64■□□□□ 0.41
TRAPPC9-205ENST00000518839 METAP2P50579 478 aaKnown RBP eCLIP17.64■□□□□ 0.41
TRAPPC9-205ENST00000518839 CCT2P78371 535 aaKnown RBP17.64■□□□□ 0.41
TRAPPC9-205ENST00000518839 PPP2R5BQ15173 497 aa17.64■□□□□ 0.41
TRAPPC9-205ENST00000518839 LARP1BQ659C4 914 aaKnown RBP17.64■□□□□ 0.41
TRAPPC9-205ENST00000518839 APOBEC3HQ6NTF7 200 aaKnown RBP17.64■□□□□ 0.41
TRAPPC9-205ENST00000518839 STK11IPQ8N1F8 1099 aa17.64■□□□□ 0.41
TRAPPC9-205ENST00000518839 JDP2Q8WYK2 163 aa17.64■□□□□ 0.41
TRAPPC9-205ENST00000518839 MKNK2Q9HBH9 465 aa17.64■□□□□ 0.41
TRAPPC9-205ENST00000518839 BCS1LQ9Y276 419 aa17.64■□□□□ 0.41
TRAPPC9-205ENST00000518839 ZDHHC9Q9Y397 364 aa17.64■□□□□ 0.41
TRAPPC9-205ENST00000518839 TNKSO95271 1327 aa17.64■□□□□ 0.41
TRAPPC9-205ENST00000518839 ZSCAN22P10073 491 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC9-205ENST00000518839 PKP1Q13835 747 aa17.63■□□□□ 0.41
TRAPPC9-205ENST00000518839 CDC42EP5Q6NZY7 148 aa17.63■□□□□ 0.41
TRAPPC9-205ENST00000518839 C16orf86Q6ZW13 317 aa17.63■□□□□ 0.41
TRAPPC9-205ENST00000518839 RGS22Q8NE09 1264 aa17.63■□□□□ 0.41
TRAPPC9-205ENST00000518839 AGBL3Q8NEM8 1001 aa17.63■□□□□ 0.41
TRAPPC9-205ENST00000518839 HPS5Q9UPZ3 1129 aa17.63■□□□□ 0.41
TRAPPC9-205ENST00000518839 CCDC196A0A1B0GTZ2 297 aa17.62■□□□□ 0.41
TRAPPC9-205ENST00000518839 PTPDC1A2A3K4 754 aa17.62■□□□□ 0.41
TRAPPC9-205ENST00000518839 TSPY2A6NKD2 308 aa17.62■□□□□ 0.41
TRAPPC9-205ENST00000518839 GOLGA8AA7E2F4 631 aa17.62■□□□□ 0.41
TRAPPC9-205ENST00000518839 WDHD1O75717 1129 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC9-205ENST00000518839 BAG4O95429 457 aaKnown RBP17.62■□□□□ 0.41
TRAPPC9-205ENST00000518839 CALM1P0DP23 149 aa17.62■□□□□ 0.41
TRAPPC9-205ENST00000518839 CALM2P0DP24 149 aa17.62■□□□□ 0.41
TRAPPC9-205ENST00000518839 CALM3P0DP25 149 aa17.62■□□□□ 0.41
TRAPPC9-205ENST00000518839 RBM5P52756 815 aaKnown RBP eCLIP17.62■□□□□ 0.41
TRAPPC9-205ENST00000518839 SEC23AQ15436 765 aa17.62■□□□□ 0.41
TRAPPC9-205ENST00000518839 ZNF444Q8N0Y2 327 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC9-205ENST00000518839 NKX2-3Q8TAU0 364 aa17.62■□□□□ 0.41
TRAPPC9-205ENST00000518839 SAP30BPQ9UHR5 308 aaKnown RBP17.62■□□□□ 0.41
TRAPPC9-205ENST00000518839 COL4A5P29400 1685 aa17.61■□□□□ 0.41
TRAPPC9-205ENST00000518839 PSMD14O00487 310 aa17.61■□□□□ 0.41
TRAPPC9-205ENST00000518839 PRDM1O75626 825 aa17.61■□□□□ 0.41
TRAPPC9-205ENST00000518839 HLA-DOAP06340 250 aa17.61■□□□□ 0.41
TRAPPC9-205ENST00000518839 IFIT1BQ5T764 474 aaKnown RBP17.61■□□□□ 0.41
TRAPPC9-205ENST00000518839 OGFOD1Q8N543 542 aa17.61■□□□□ 0.41
TRAPPC9-205ENST00000518839 ZKSCAN3Q9BRR0 538 aa17.61■□□□□ 0.41
TRAPPC9-205ENST00000518839 IDI2Q9BXS1 227 aa17.61■□□□□ 0.41
TRAPPC9-205ENST00000518839 OSBPL5Q9H0X9 879 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC9-205ENST00000518839 DHX36Q9H2U1 1008 aaKnown RBP17.61■□□□□ 0.41
TRAPPC9-205ENST00000518839 TCP11L1Q9NUJ3 509 aa17.61■□□□□ 0.41
TRAPPC9-205ENST00000518839 SWAP70Q9UH65 585 aa17.61■□□□□ 0.41
TRAPPC9-205ENST00000518839 SMIM22K7EJ46 135 aa17.6■□□□□ 0.41
TRAPPC9-205ENST00000518839 NFKBIEO00221 500 aa17.6■□□□□ 0.41
TRAPPC9-205ENST00000518839 JAK2O60674 1132 aa17.6■□□□□ 0.41
TRAPPC9-205ENST00000518839 RAD17O75943 681 aa17.6■□□□□ 0.41
TRAPPC9-205ENST00000518839 CTDNEP1O95476 244 aa17.6■□□□□ 0.41
TRAPPC9-205ENST00000518839 F13A1P00488 732 aa17.6■□□□□ 0.41
TRAPPC9-205ENST00000518839 PLCD1P51178 756 aa17.6■□□□□ 0.41
TRAPPC9-205ENST00000518839 PICALMQ13492 652 aa17.6■□□□□ 0.41
TRAPPC9-205ENST00000518839 TNIP1Q15025 636 aa17.6■□□□□ 0.41
TRAPPC9-205ENST00000518839 CFAP100Q494V2 611 aa17.6■□□□□ 0.41
TRAPPC9-205ENST00000518839 CIAPIN1Q6FI81 312 aa17.6■□□□□ 0.41
TRAPPC9-205ENST00000518839 CATIPQ7Z7H3 387 aa17.6■□□□□ 0.41
TRAPPC9-205ENST00000518839 MICU3Q86XE3 530 aa17.6■□□□□ 0.41
TRAPPC9-205ENST00000518839 ZNF654Q8IZM8 581 aa17.6■□□□□ 0.41
TRAPPC9-205ENST00000518839 GMLQ99445 158 aa17.6■□□□□ 0.41
TRAPPC9-205ENST00000518839 NCOA5Q9HCD5 579 aaKnown RBP17.6■□□□□ 0.41
TRAPPC9-205ENST00000518839 MTMR6Q9Y217 621 aa17.6■□□□□ 0.41
TRAPPC9-205ENST00000518839 COL2A1P02458 1487 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC9-205ENST00000518839 VPS37CA5D8V6 355 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC9-205ENST00000518839 DDAH1O94760 285 aa17.59■□□□□ 0.41
TRAPPC9-205ENST00000518839 CDK8P49336 464 aa17.59■□□□□ 0.41
TRAPPC9-205ENST00000518839 TFAP4Q01664 338 aa17.59■□□□□ 0.41
TRAPPC9-205ENST00000518839 DGKHQ86XP1 1220 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms