RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 SAP130Q9H0E3 1048 aa8.77□□□□□ -1.01
CCDC6-203ENST00000518638 KLK14Q9P0G3 267 aa8.77□□□□□ -1.01
CCDC6-203ENST00000518638 KCNH4Q9UQ05 1017 aa8.77□□□□□ -1.01
CCDC6-203ENST00000518638 BCS1LQ9Y276 419 aa8.77□□□□□ -1.01
CCDC6-203ENST00000518638 TTC21AQ8NDW8 1320 aa8.77□□□□□ -1.01
CCDC6-203ENST00000518638 AFF1P51825 1210 aaKnown RBP8.76□□□□□ -1.01
CCDC6-203ENST00000518638 NAA30Q147X3 362 aaPredicted RBP8.76□□□□□ -1.01
CCDC6-203ENST00000518638 DMRTC2Q8IXT2 367 aaPredicted RBP8.76□□□□□ -1.01
CCDC6-203ENST00000518638 SEPT3Q9UH03 358 aa8.76□□□□□ -1.01
CCDC6-203ENST00000518638 LY75O60449 1722 aa8.76□□□□□ -1.01
CCDC6-203ENST00000518638 FAM208AQ9UK61 1670 aaKnown RBP8.75□□□□□ -1.01
CCDC6-203ENST00000518638 SCNN1AP37088 669 aa8.75□□□□□ -1.01
CCDC6-203ENST00000518638 TYRO3Q06418 890 aa8.75□□□□□ -1.01
CCDC6-203ENST00000518638 BTLAQ7Z6A9 289 aa8.75□□□□□ -1.01
CCDC6-203ENST00000518638 SLC51AQ86UW1 340 aa8.75□□□□□ -1.01
CCDC6-203ENST00000518638 FLAD1Q8NFF5 587 aa8.75□□□□□ -1.01
CCDC6-203ENST00000518638 CENPJQ9HC77 1338 aaPredicted RBP8.75□□□□□ -1.01
CCDC6-203ENST00000518638 NFAT5O94916 1531 aa8.75□□□□□ -1.01
CCDC6-203ENST00000518638 TNFRSF10BO14763 440 aa8.74□□□□□ -1.01
CCDC6-203ENST00000518638 TOMM70O94826 608 aa8.74□□□□□ -1.01
CCDC6-203ENST00000518638 IREB2P48200 963 aaKnown RBP8.74□□□□□ -1.01
CCDC6-203ENST00000518638 PSAPL1Q6NUJ1 521 aa8.74□□□□□ -1.01
CCDC6-203ENST00000518638 PRR23CQ6ZRP0 262 aa8.74□□□□□ -1.01
CCDC6-203ENST00000518638 DTWD1Q8N5C7 304 aa8.74□□□□□ -1.01
CCDC6-203ENST00000518638 ZNF526Q8TF50 670 aaPredicted RBP8.74□□□□□ -1.01
CCDC6-203ENST00000518638 DMGDHQ9UI17 866 aaKnown RBP8.74□□□□□ -1.01
CCDC6-203ENST00000518638 MTMR7Q9Y216 660 aa8.74□□□□□ -1.01
CCDC6-203ENST00000518638 WDR90Q96KV7 1748 aa8.74□□□□□ -1.01
CCDC6-203ENST00000518638 CICQ96RK0 1608 aaPredicted RBP8.73□□□□□ -1.01
CCDC6-203ENST00000518638 NOS3P29474 1203 aa8.73□□□□□ -1.01
CCDC6-203ENST00000518638 SSTR4P31391 388 aa8.73□□□□□ -1.01
CCDC6-203ENST00000518638 PRELPP51888 382 aa8.73□□□□□ -1.01
CCDC6-203ENST00000518638 IFT43Q96FT9 208 aa8.73□□□□□ -1.01
CCDC6-203ENST00000518638 IGFLR1Q9H665 355 aa8.73□□□□□ -1.01
CCDC6-203ENST00000518638 ANKRD36BQ8N2N9 1353 aa8.73□□□□□ -1.01
CCDC6-203ENST00000518638 NSD3Q9BZ95 1437 aa8.72□□□□□ -1.01
CCDC6-203ENST00000518638 USP54Q70EL1 1684 aa8.72□□□□□ -1.01
CCDC6-203ENST00000518638 RGS9O75916 674 aaPredicted RBP8.72□□□□□ -1.01
CCDC6-203ENST00000518638 BRD2P25440 801 aaKnown RBP8.72□□□□□ -1.01
CCDC6-203ENST00000518638 HELQQ8TDG4 1101 aa8.72□□□□□ -1.01
CCDC6-203ENST00000518638 MEGF10Q96KG7 1140 aa8.72□□□□□ -1.01
CCDC6-203ENST00000518638 TRAIPQ9BWF2 469 aa8.72□□□□□ -1.01
CCDC6-203ENST00000518638 NLRP2Q9NX02 1062 aa8.72□□□□□ -1.01
CCDC6-203ENST00000518638 TTC21BQ7Z4L5 1316 aa8.72□□□□□ -1.01
CCDC6-203ENST00000518638 DOT1LQ8TEK3 1739 aa8.71□□□□□ -1.01
CCDC6-203ENST00000518638 LTN1O94822 1766 aa8.71□□□□□ -1.01
CCDC6-203ENST00000518638 GOLGB1Q14789 3259 aaKnown RBP8.71□□□□□ -1.01
CCDC6-203ENST00000518638 BRD1O95696 1058 aa8.71□□□□□ -1.02
CCDC6-203ENST00000518638 FSTP19883 344 aa8.71□□□□□ -1.02
CCDC6-203ENST00000518638 CD97P48960 835 aa8.71□□□□□ -1.02
CCDC6-203ENST00000518638 FBXO11Q86XK2 927 aa8.71□□□□□ -1.02
CCDC6-203ENST00000518638 DNAJC5GQ8N7S2 189 aa8.71□□□□□ -1.02
CCDC6-203ENST00000518638 JMYQ8N9B5 988 aa8.71□□□□□ -1.02
CCDC6-203ENST00000518638 EFCC1Q9HA90 598 aa8.71□□□□□ -1.02
CCDC6-203ENST00000518638 CCNL1Q9UK58 526 aaPredicted RBP8.71□□□□□ -1.02
CCDC6-203ENST00000518638 EVC2Q86UK5 1308 aa8.71□□□□□ -1.02
CCDC6-203ENST00000518638 C5P01031 1676 aa8.71□□□□□ -1.02
CCDC6-203ENST00000518638 USP47Q96K76 1375 aa8.71□□□□□ -1.02
CCDC6-203ENST00000518638 MICAL2O94851 1124 aa8.7□□□□□ -1.02
CCDC6-203ENST00000518638 ARID4AP29374 1257 aaPredicted RBP8.7□□□□□ -1.02
CCDC6-203ENST00000518638 IDH3AP50213 366 aa8.7□□□□□ -1.02
CCDC6-203ENST00000518638 ETFBKMTQ8IXQ9 262 aa8.7□□□□□ -1.02
CCDC6-203ENST00000518638 GTF3C2Q8WUA4 911 aaPredicted RBP8.7□□□□□ -1.02
CCDC6-203ENST00000518638 SYTL4Q96C24 671 aaPredicted RBP8.7□□□□□ -1.02
CCDC6-203ENST00000518638 DNAJB12Q9NXW2 375 aaKnown RBP8.7□□□□□ -1.02
CCDC6-203ENST00000518638 STIM2Q9P246 746 aa8.7□□□□□ -1.02
CCDC6-203ENST00000518638 NAGPAQ9UK23 515 aa8.7□□□□□ -1.02
CCDC6-203ENST00000518638 MON2Q7Z3U7 1717 aa8.69□□□□□ -1.02
CCDC6-203ENST00000518638 TAL1P17542 331 aaPredicted RBP8.69□□□□□ -1.02
CCDC6-203ENST00000518638 INPP5BP32019 993 aa8.69□□□□□ -1.02
CCDC6-203ENST00000518638 ARSDP51689 593 aa8.69□□□□□ -1.02
CCDC6-203ENST00000518638 FSTL1Q12841 308 aa8.69□□□□□ -1.02
CCDC6-203ENST00000518638 FZD5Q13467 585 aa8.69□□□□□ -1.02
CCDC6-203ENST00000518638 FAM26DQ5JW98 314 aa8.69□□□□□ -1.02
CCDC6-203ENST00000518638 COL13A1Q5TAT6 717 aaPredicted RBP8.69□□□□□ -1.02
CCDC6-203ENST00000518638 MSL1Q68DK7 614 aa8.69□□□□□ -1.02
CCDC6-203ENST00000518638 COL23A1Q86Y22 540 aaPredicted RBP8.69□□□□□ -1.02
CCDC6-203ENST00000518638 TREML1Q86YW5 311 aa8.69□□□□□ -1.02
CCDC6-203ENST00000518638 C16orf71Q8IYS4 520 aaPredicted RBP8.69□□□□□ -1.02
CCDC6-203ENST00000518638 RNF114Q9Y508 228 aa8.69□□□□□ -1.02
CCDC6-203ENST00000518638 IGSF1Q8N6C5 1336 aa8.69□□□□□ -1.02
CCDC6-203ENST00000518638 PLEKHG2Q9H7P9 1386 aa8.69□□□□□ -1.02
CCDC6-203ENST00000518638 EPB42P16452 691 aa8.68□□□□□ -1.02
CCDC6-203ENST00000518638 IGF2-ASQ6U949 168 aa8.68□□□□□ -1.02
CCDC6-203ENST00000518638 ANKRD24Q8TF21 1146 aa8.68□□□□□ -1.02
CCDC6-203ENST00000518638 USP31Q70CQ4 1352 aa8.68□□□□□ -1.02
CCDC6-203ENST00000518638 KTN1Q86UP2 1357 aaKnown RBP8.68□□□□□ -1.02
CCDC6-203ENST00000518638 DDX54Q8TDD1 881 aaKnown RBP8.67□□□□□ -1.02
CCDC6-203ENST00000518638 EGFL7Q9UHF1 273 aa8.67□□□□□ -1.02
CCDC6-203ENST00000518638 TAF1LQ8IZX4 1826 aa8.66□□□□□ -1.02
CCDC6-203ENST00000518638 NSD2O96028 1365 aa8.66□□□□□ -1.02
CCDC6-203ENST00000518638 RAB3GAP2Q9H2M9 1393 aa8.66□□□□□ -1.02
CCDC6-203ENST00000518638 CGNL1Q0VF96 1302 aa8.66□□□□□ -1.02
CCDC6-203ENST00000518638 OPLAHO14841 1288 aa8.66□□□□□ -1.02
CCDC6-203ENST00000518638 GRNP28799 593 aaKnown RBP8.66□□□□□ -1.02
CCDC6-203ENST00000518638 OAS3Q9Y6K5 1087 aaKnown RBP8.66□□□□□ -1.02
CCDC6-203ENST00000518638 C10orf71Q711Q0 1435 aa8.65□□□□□ -1.02
CCDC6-203ENST00000518638 ABL1P00519 1130 aa8.65□□□□□ -1.02
CCDC6-203ENST00000518638 NPR3P17342 541 aa8.65□□□□□ -1.02
CCDC6-203ENST00000518638 SERPINB4P48594 390 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms