RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 DDX60LQ5H9U9 1706 aaKnown RBP26.47■■□□□ 1.83
VEGFA-217ENST00000518538 SIPA1L1O43166 1804 aa26.46■■□□□ 1.83
VEGFA-217ENST00000518538 METTL16Q86W50 562 aaKnown RBP26.46■■□□□ 1.83
VEGFA-217ENST00000518538 TICAM2Q86XR7 235 aa26.46■■□□□ 1.83
VEGFA-217ENST00000518538 ERO1BQ86YB8 467 aa26.46■■□□□ 1.83
VEGFA-217ENST00000518538 ATP8A2Q9NTI2 1148 aa26.46■■□□□ 1.83
VEGFA-217ENST00000518538 NAV1Q8NEY1 1877 aa26.45■■□□□ 1.83
VEGFA-217ENST00000518538 FAM196BA6NMK8 535 aa26.45■■□□□ 1.82
VEGFA-217ENST00000518538 PRKAB2O43741 272 aa26.45■■□□□ 1.82
VEGFA-217ENST00000518538 CENPQQ7L2Z9 268 aaPredicted RBP26.45■■□□□ 1.82
VEGFA-217ENST00000518538 TTC6Q86TZ1 520 aa26.45■■□□□ 1.82
VEGFA-217ENST00000518538 CNKSR2Q8WXI2 1034 aa26.45■■□□□ 1.82
VEGFA-217ENST00000518538 BEGAINQ9BUH8 593 aa26.45■■□□□ 1.82
VEGFA-217ENST00000518538 MYH1P12882 1939 aa26.45■■□□□ 1.82
VEGFA-217ENST00000518538 TRIM6-TRIM34B2RNG4 842 aa26.44■■□□□ 1.82
VEGFA-217ENST00000518538 CTNND1O60716 968 aaKnown RBP26.44■■□□□ 1.82
VEGFA-217ENST00000518538 SLC4A8Q2Y0W8 1093 aa26.44■■□□□ 1.82
VEGFA-217ENST00000518538 ZMYM1Q5SVZ6 1142 aa26.44■■□□□ 1.82
VEGFA-217ENST00000518538 SCYL3Q8IZE3 742 aa26.44■■□□□ 1.82
VEGFA-217ENST00000518538 CRACR2BQ8N4Y2 399 aaPredicted RBP26.44■■□□□ 1.82
VEGFA-217ENST00000518538 OTUD5Q96G74 571 aa26.44■■□□□ 1.82
VEGFA-217ENST00000518538 STRBPQ96SI9 672 aaKnown RBP26.44■■□□□ 1.82
VEGFA-217ENST00000518538 MCM9Q9NXL9 1143 aa26.44■■□□□ 1.82
VEGFA-217ENST00000518538 SLC4A4Q9Y6R1 1079 aa26.44■■□□□ 1.82
VEGFA-217ENST00000518538 MANSC4A6NHS7 340 aaPredicted RBP26.43■■□□□ 1.82
VEGFA-217ENST00000518538 M0R2C6 588 aa26.43■■□□□ 1.82
VEGFA-217ENST00000518538 SREBF2Q12772 1141 aa26.43■■□□□ 1.82
VEGFA-217ENST00000518538 TRIM34Q9BYJ4 488 aa26.43■■□□□ 1.82
VEGFA-217ENST00000518538 EHD4Q9H223 541 aa26.43■■□□□ 1.82
VEGFA-217ENST00000518538 DNAJC18Q9H819 358 aa26.43■■□□□ 1.82
VEGFA-217ENST00000518538 LAMB1P07942 1786 aa26.43■■□□□ 1.82
VEGFA-217ENST00000518538 GPAA1O43292 621 aa26.42■■□□□ 1.82
VEGFA-217ENST00000518538 POLR3DP05423 398 aaPredicted RBP26.42■■□□□ 1.82
VEGFA-217ENST00000518538 TM4SF4P48230 202 aa26.42■■□□□ 1.82
VEGFA-217ENST00000518538 RILPL2Q969X0 211 aa26.42■■□□□ 1.82
VEGFA-217ENST00000518538 DDRGK1Q96HY6 314 aa26.42■■□□□ 1.82
VEGFA-217ENST00000518538 PICK1Q9NRD5 415 aa26.42■■□□□ 1.82
VEGFA-217ENST00000518538 CA12O43570 354 aa26.41■■□□□ 1.82
VEGFA-217ENST00000518538 INHBEP58166 350 aa26.41■■□□□ 1.82
VEGFA-217ENST00000518538 PPATQ06203 517 aa26.41■■□□□ 1.82
VEGFA-217ENST00000518538 PPIL2Q13356 520 aa26.41■■□□□ 1.82
VEGFA-217ENST00000518538 SERPINB13Q9UIV8 391 aa26.41■■□□□ 1.82
VEGFA-217ENST00000518538 FOXN1O15353 648 aa26.4■■□□□ 1.82
VEGFA-217ENST00000518538 GNAT2P19087 354 aa26.4■■□□□ 1.82
VEGFA-217ENST00000518538 PLCD1P51178 756 aa26.4■■□□□ 1.82
VEGFA-217ENST00000518538 CCDC136Q96JN2 1154 aa26.4■■□□□ 1.82
VEGFA-217ENST00000518538 SEC62Q99442 399 aaKnown RBP26.4■■□□□ 1.82
VEGFA-217ENST00000518538 DOCK1Q14185 1865 aa26.4■■□□□ 1.82
VEGFA-217ENST00000518538 CAP2P40123 477 aa26.39■■□□□ 1.82
VEGFA-217ENST00000518538 GTF2A2P52657 109 aa26.39■■□□□ 1.82
VEGFA-217ENST00000518538 TTC22Q5TAA0 569 aa26.39■■□□□ 1.82
VEGFA-217ENST00000518538 MS4A4AQ96JQ5 239 aa26.39■■□□□ 1.82
VEGFA-217ENST00000518538 PCNTO95613 3336 aa26.39■■□□□ 1.82
VEGFA-217ENST00000518538 IRF6O14896 467 aa26.38■■□□□ 1.81
VEGFA-217ENST00000518538 PTPRAP18433 802 aa26.38■■□□□ 1.81
VEGFA-217ENST00000518538 RRP1BQ14684 758 aaKnown RBP26.38■■□□□ 1.81
VEGFA-217ENST00000518538 GIMAP6Q6P9H5 292 aa26.38■■□□□ 1.81
VEGFA-217ENST00000518538 AMOTL1Q8IY63 956 aa26.38■■□□□ 1.81
VEGFA-217ENST00000518538 SAGE1Q9NXZ1 904 aa26.38■■□□□ 1.81
VEGFA-217ENST00000518538 TESPA1A2RU30 521 aaPredicted RBP26.37■■□□□ 1.81
VEGFA-217ENST00000518538 GSG1L2A8MUP6 293 aa26.37■■□□□ 1.81
VEGFA-217ENST00000518538 GABPAQ06546 454 aa26.37■■□□□ 1.81
VEGFA-217ENST00000518538 HELLSQ9NRZ9 838 aa26.37■■□□□ 1.81
VEGFA-217ENST00000518538 RNF186Q9NXI6 227 aa26.37■■□□□ 1.81
VEGFA-217ENST00000518538 TAOK2Q9UL54 1235 aa26.37■■□□□ 1.81
VEGFA-217ENST00000518538 USP17L12C9JPN9 530 aa26.36■■□□□ 1.81
VEGFA-217ENST00000518538 USP17L21D6R901 530 aa26.36■■□□□ 1.81
VEGFA-217ENST00000518538 CYP2D6P10635 497 aa26.36■■□□□ 1.81
VEGFA-217ENST00000518538 CTCFP49711 727 aaPredicted RBP26.36■■□□□ 1.81
VEGFA-217ENST00000518538 SNAPC2Q13487 334 aa26.36■■□□□ 1.81
VEGFA-217ENST00000518538 TATDN1Q6P1N9 297 aa26.36■■□□□ 1.81
VEGFA-217ENST00000518538 KCNH4Q9UQ05 1017 aa26.36■■□□□ 1.81
VEGFA-217ENST00000518538 GSPT1P15170 499 aaKnown RBP26.35■■□□□ 1.81
VEGFA-217ENST00000518538 SDSP20132 328 aa26.35■■□□□ 1.81
VEGFA-217ENST00000518538 C12orf60Q5U649 245 aa26.35■■□□□ 1.81
VEGFA-217ENST00000518538 ERICH6BQ5W0A0 696 aa26.35■■□□□ 1.81
VEGFA-217ENST00000518538 CTR9Q6PD62 1173 aa26.35■■□□□ 1.81
VEGFA-217ENST00000518538 IFNL1Q8IU54 200 aa26.35■■□□□ 1.81
VEGFA-217ENST00000518538 FAM227BQ96M60 508 aa26.35■■□□□ 1.81
VEGFA-217ENST00000518538 GINM1Q9NU53 330 aa26.35■■□□□ 1.81
VEGFA-217ENST00000518538 ARPP21Q9UBL0 812 aaPredicted RBP26.35■■□□□ 1.81
VEGFA-217ENST00000518538 ZHX2Q9Y6X8 837 aa26.35■■□□□ 1.81
VEGFA-217ENST00000518538 BAZ2AQ9UIF9 1905 aaKnown RBP26.34■■□□□ 1.81
VEGFA-217ENST00000518538 A0A0D9SFI3 127 aa26.34■■□□□ 1.81
VEGFA-217ENST00000518538 PATL2C9JE40 543 aaKnown RBP26.34■■□□□ 1.81
VEGFA-217ENST00000518538 CETPP11597 493 aa26.34■■□□□ 1.81
VEGFA-217ENST00000518538 EVX2Q03828 476 aa26.34■■□□□ 1.81
VEGFA-217ENST00000518538 EPB41L4AQ9HCS5 686 aaPredicted RBP26.34■■□□□ 1.81
VEGFA-217ENST00000518538 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.34■■□□□ 1.81
VEGFA-217ENST00000518538 ATAD5Q96QE3 1844 aa26.33■■□□□ 1.81
VEGFA-217ENST00000518538 CCL15-CCL14A0A0B4J2E2 113 aa26.33■■□□□ 1.81
VEGFA-217ENST00000518538 TRPA1O75762 1119 aa26.33■■□□□ 1.81
VEGFA-217ENST00000518538 ALDH1A1P00352 501 aa26.33■■□□□ 1.81
VEGFA-217ENST00000518538 ASNSP08243 561 aa26.33■■□□□ 1.81
VEGFA-217ENST00000518538 HSPA8P11142 646 aaKnown RBP26.33■■□□□ 1.81
VEGFA-217ENST00000518538 SHMT1P34896 483 aa26.33■■□□□ 1.81
VEGFA-217ENST00000518538 NMIQ13287 307 aaPredicted RBP26.33■■□□□ 1.81
VEGFA-217ENST00000518538 CCL15Q16663 113 aa26.33■■□□□ 1.81
VEGFA-217ENST00000518538 MCMDC2Q4G0Z9 681 aa26.33■■□□□ 1.81
VEGFA-217ENST00000518538 SBK1Q52WX2 424 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms