RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 LINC00301Q8NCQ3 95 aa9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 SPATA32Q96LK8 384 aa9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 CAMKK2Q96RR4 588 aa9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 FOXP1Q9H334 677 aaPredicted RBP9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 RAI14Q9P0K7 980 aa9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 RGS17Q9UGC6 210 aaPredicted RBP9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 POLLQ9UGP5 575 aa9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 KDM4AO75164 1064 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 PDE6BP35913 854 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 RHBDL3P58872 404 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 TROAPQ12815 778 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 WTAPQ15007 396 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 CRACR2BQ8N4Y2 399 aaPredicted RBP9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 MYH4Q9Y623 1939 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 A0A0G2JS52 829 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 PRPF3O43395 683 aaKnown RBP9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 LDHCP07864 332 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 SMARCA1P28370 1054 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 DYNLL1P63167 89 aaKnown RBP9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 PTPAQ15257 358 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 ADALQ6DHV7 355 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 CHST3Q7LGC8 479 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 KCNG4Q8TDN1 519 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 GZF1Q9H116 711 aaPredicted RBP9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 ORC3Q9UBD5 711 aaPredicted RBP9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 SYCE3A1L190 88 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 CTAGE5O15320 804 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 LDHBP07195 334 aaKnown RBP9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 PLCG2P16885 1265 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 CCT2P78371 535 aaKnown RBP9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 MYSM1Q5VVJ2 828 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 DGKHQ86XP1 1220 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 VPS37DQ86XT2 251 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 ZNF654Q8IZM8 581 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 C7orf43Q8WVR3 580 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 TNFRSF25Q93038 417 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 C8orf76Q96K31 380 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 PANK2Q9BZ23 570 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 GDPD2Q9HCC8 539 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 TNKSO95271 1327 aa9.34□□□□□ -0.91
ARFGEF1-204ENST00000518290 KIF28PB7ZC32 967 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 H3BQV1 296 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 DEXIO95424 95 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 MMP1P03956 469 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 ALDH1B1P30837 517 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 IFFO2Q5TF58 517 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 RCSD1Q6JBY9 416 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 C16orf86Q6ZW13 317 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 SLF2Q8IX21 1173 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 MASTLQ96GX5 879 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 TIGD1Q96MW7 591 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 HPSEQ9Y251 543 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 SLC12A7Q9Y666 1083 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 GOLGA8AA7E2F4 631 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 IFIT3O14879 490 aaKnown RBP9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 FIBPO43427 364 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 FGD1P98174 961 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 HDLBPQ00341 1268 aaKnown RBP9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 PKN1Q16512 942 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 AXDND1Q5T1B0 1012 aaPredicted RBP9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 CPLX2Q6PUV4 134 aaKnown RBP9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 FMR1NBQ8N0W7 255 aaPredicted RBP9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 MIGA1Q8NAN2 632 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 FANCBQ8NB91 859 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 SDR42E1Q8WUS8 393 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 USP28Q96RU2 1077 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 SH3GLB2Q9NR46 395 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 CNTNAP5Q8WYK1 1306 aa9.33□□□□□ -0.92
ARFGEF1-204ENST00000518290 RXRBP28702 533 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 SLC39A14Q15043 492 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 NOL10Q9BSC4 688 aaKnown RBP9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 PHF20Q9BVI0 1012 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 TFCP2L1Q9NZI6 479 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 IGKV6D-41A0A0C4DH26 115 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 CCDC69A6NI79 296 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 APPP05067 770 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 SLC3A2P08195 630 aaKnown RBP9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 LIG1P18858 919 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 GABPAQ06546 454 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 RTN1Q16799 776 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 TMTC3Q6ZXV5 915 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 ZNF579Q8NAF0 562 aaKnown RBP9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 SHISA4Q96DD7 197 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 BPIFA3Q9BQP9 254 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 VPS33BQ9H267 617 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 BAG3O95817 575 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 FAM160A1Q05DH4 1040 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 SSRP1Q08945 709 aaKnown RBP9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 NPY5RQ15761 445 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 FOXD4L5Q5VV16 416 aaPredicted RBP9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 KRT40Q6A162 431 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 HHIPL2Q6UWX4 724 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 METTL16Q86W50 562 aaKnown RBP9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 DAGLBQ8NCG7 672 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 FOXD4L4Q8WXT5 416 aaPredicted RBP9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 DDX11Q96FC9 970 aa9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 NAP1L5Q96NT1 182 aaPredicted RBP9.32□□□□□ -0.92
ARFGEF1-204ENST00000518290 UFL1O94874 794 aa9.31□□□□□ -0.92
ARFGEF1-204ENST00000518290 IARSP41252 1262 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms