RNA–Protein interactions for RNA: ENST00000518151.1

CSMD1-203, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-203ENST00000518151 MPRIPQ6WCQ1 1025 aa8.08□□□□□ -1.12
CSMD1-203ENST00000518151 HDXQ7Z353 690 aa8.08□□□□□ -1.12
CSMD1-203ENST00000518151 C12orf40Q86WS4 652 aa8.08□□□□□ -1.12
CSMD1-203ENST00000518151 ZNF507Q8TCN5 953 aa8.08□□□□□ -1.12
CSMD1-203ENST00000518151 BTBD11A6QL63 1104 aa8.07□□□□□ -1.12
CSMD1-203ENST00000518151 PRPF40AO75400 957 aaKnown RBP8.07□□□□□ -1.12
CSMD1-203ENST00000518151 CELA3AP09093 270 aa8.07□□□□□ -1.12
CSMD1-203ENST00000518151 CD8BP10966 210 aa8.07□□□□□ -1.12
CSMD1-203ENST00000518151 ITIH2P19823 946 aa8.07□□□□□ -1.12
CSMD1-203ENST00000518151 NTF4P34130 210 aa8.07□□□□□ -1.12
CSMD1-203ENST00000518151 ANGEL2Q5VTE6 544 aaKnown RBP8.07□□□□□ -1.12
CSMD1-203ENST00000518151 WFDC3Q8IUB2 231 aa8.07□□□□□ -1.12
CSMD1-203ENST00000518151 GNAT3A8MTJ3 354 aa8.06□□□□□ -1.12
CSMD1-203ENST00000518151 LMNB1P20700 586 aa8.06□□□□□ -1.12
CSMD1-203ENST00000518151 ATG4DQ86TL0 474 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-203ENST00000518151 PI4K2BQ8TCG2 481 aa8.06□□□□□ -1.12
CSMD1-203ENST00000518151 ASB11Q8WXH4 323 aa8.06□□□□□ -1.12
CSMD1-203ENST00000518151 TNKS2Q9H2K2 1166 aa8.06□□□□□ -1.12
CSMD1-203ENST00000518151 LRIG2O94898 1065 aa8.05□□□□□ -1.12
CSMD1-203ENST00000518151 ARMCX6Q7L4S7 300 aa8.05□□□□□ -1.12
CSMD1-203ENST00000518151 HEXIM2Q96MH2 286 aaKnown RBP8.05□□□□□ -1.12
CSMD1-203ENST00000518151 RC3H2Q9HBD1 1191 aaKnown RBP8.05□□□□□ -1.12
CSMD1-203ENST00000518151 PRDM5Q9NQX1 630 aaPredicted RBP8.05□□□□□ -1.12
CSMD1-203ENST00000518151 PLAGL2Q9UPG8 496 aa8.05□□□□□ -1.12
CSMD1-203ENST00000518151 U3KQE9 123 aa8.05□□□□□ -1.12
CSMD1-203ENST00000518151 PRAMEF27A3QJZ7 478 aa8.04□□□□□ -1.12
CSMD1-203ENST00000518151 RPS26P62854 115 aaKnown RBP8.04□□□□□ -1.12
CSMD1-203ENST00000518151 RASIP1Q5U651 963 aa8.04□□□□□ -1.12
CSMD1-203ENST00000518151 TTBK2Q6IQ55 1244 aa8.04□□□□□ -1.12
CSMD1-203ENST00000518151 FAM214BQ7L5A3 538 aa8.04□□□□□ -1.12
CSMD1-203ENST00000518151 MAPK8IP1Q9UQF2 711 aa8.04□□□□□ -1.12
CSMD1-203ENST00000518151 SNCAIPQ9Y6H5 919 aa8.04□□□□□ -1.12
CSMD1-203ENST00000518151 PAPLNO95428 1278 aa8.03□□□□□ -1.12
CSMD1-203ENST00000518151 CLCN7P51798 805 aa8.03□□□□□ -1.12
CSMD1-203ENST00000518151 CCDC85BQ15834 202 aaPredicted RBP8.03□□□□□ -1.12
CSMD1-203ENST00000518151 OGFOD2Q6N063 350 aa8.03□□□□□ -1.12
CSMD1-203ENST00000518151 SLC23A3Q6PIS1 610 aa8.03□□□□□ -1.12
CSMD1-203ENST00000518151 LRFN4Q6PJG9 635 aa8.03□□□□□ -1.12
CSMD1-203ENST00000518151 CYFIP1Q7L576 1253 aa8.03□□□□□ -1.12
CSMD1-203ENST00000518151 POU5F2Q8N7G0 328 aa8.03□□□□□ -1.12
CSMD1-203ENST00000518151 FOXQ1Q9C009 403 aa8.03□□□□□ -1.12
CSMD1-203ENST00000518151 RNASE1P07998 156 aaKnown RBP8.02□□□□□ -1.13
CSMD1-203ENST00000518151 INPP5AQ14642 412 aa8.02□□□□□ -1.13
CSMD1-203ENST00000518151 ZNF746Q6NUN9 644 aaPredicted RBP8.02□□□□□ -1.13
CSMD1-203ENST00000518151 PLPPR2Q96GM1 343 aa8.02□□□□□ -1.13
CSMD1-203ENST00000518151 WNT10AQ9GZT5 417 aa8.02□□□□□ -1.13
CSMD1-203ENST00000518151 MBNL3Q9NUK0 354 aaKnown RBP8.02□□□□□ -1.13
CSMD1-203ENST00000518151 AK5Q9Y6K8 562 aa8.02□□□□□ -1.13
CSMD1-203ENST00000518151 CAP2P40123 477 aa8.01□□□□□ -1.13
CSMD1-203ENST00000518151 ETF1P62495 437 aaKnown RBP8.01□□□□□ -1.13
CSMD1-203ENST00000518151 IKZF1Q13422 519 aa8.01□□□□□ -1.13
CSMD1-203ENST00000518151 EAPPQ56P03 285 aaPredicted RBP8.01□□□□□ -1.13
CSMD1-203ENST00000518151 DIEXFQ68CQ4 756 aaKnown RBP8.01□□□□□ -1.13
CSMD1-203ENST00000518151 UBE3DQ7Z6J8 389 aa8.01□□□□□ -1.13
CSMD1-203ENST00000518151 SPACA3Q8IXA5 215 aa8.01□□□□□ -1.13
CSMD1-203ENST00000518151 MFSD2AQ8NA29 543 aa8.01□□□□□ -1.13
CSMD1-203ENST00000518151 GAL3ST3Q96A11 431 aa8.01□□□□□ -1.13
CSMD1-203ENST00000518151 EOMESO95936 686 aa8□□□□□ -1.13
CSMD1-203ENST00000518151 CD96P40200 585 aa8□□□□□ -1.13
CSMD1-203ENST00000518151 WIPI1Q5MNZ9 446 aaPredicted RBP8□□□□□ -1.13
CSMD1-203ENST00000518151 SND1Q7KZF4 910 aaKnown RBP eCLIP8□□□□□ -1.13
CSMD1-203ENST00000518151 HID1Q8IV36 788 aa8□□□□□ -1.13
CSMD1-203ENST00000518151 TPX2Q9ULW0 747 aaKnown RBP8□□□□□ -1.13
CSMD1-203ENST00000518151 TACC3Q9Y6A5 838 aa8□□□□□ -1.13
CSMD1-203ENST00000518151 ANKRD33BA6NCL7 494 aa7.99□□□□□ -1.13
CSMD1-203ENST00000518151 RLBP1P12271 317 aa7.99□□□□□ -1.13
CSMD1-203ENST00000518151 PTPN11Q06124 597 aaPredicted RBP7.99□□□□□ -1.13
CSMD1-203ENST00000518151 LRRN4CLQ8ND94 238 aa7.99□□□□□ -1.13
CSMD1-203ENST00000518151 DUSP9Q99956 384 aaKnown RBP7.99□□□□□ -1.13
CSMD1-203ENST00000518151 ADAMTS6Q9UKP5 1117 aa7.99□□□□□ -1.13
CSMD1-203ENST00000518151 FAM155AB1AL88 458 aaPredicted RBP7.98□□□□□ -1.13
CSMD1-203ENST00000518151 SLITRK5O94991 958 aa7.98□□□□□ -1.13
CSMD1-203ENST00000518151 ZP2Q05996 745 aa7.98□□□□□ -1.13
CSMD1-203ENST00000518151 SLBPQ14493 270 aaKnown RBP eCLIP7.98□□□□□ -1.13
CSMD1-203ENST00000518151 NKPD1Q17RQ9 610 aa7.98□□□□□ -1.13
CSMD1-203ENST00000518151 SFRP5Q5T4F7 317 aa7.98□□□□□ -1.13
CSMD1-203ENST00000518151 C22orf34Q6ZV56 151 aa7.98□□□□□ -1.13
CSMD1-203ENST00000518151 COX4I2Q96KJ9 171 aa7.98□□□□□ -1.13
CSMD1-203ENST00000518151 MIPEPQ99797 713 aa7.98□□□□□ -1.13
CSMD1-203ENST00000518151 AGMOQ6ZNB7 445 aa7.97□□□□□ -1.13
CSMD1-203ENST00000518151 MFSD4AQ8N468 514 aa7.97□□□□□ -1.13
CSMD1-203ENST00000518151 FLAD1Q8NFF5 587 aa7.97□□□□□ -1.13
CSMD1-203ENST00000518151 TMEM40Q8WWA1 233 aa7.97□□□□□ -1.13
CSMD1-203ENST00000518151 FAM168AQ92567 244 aa7.97□□□□□ -1.13
CSMD1-203ENST00000518151 MIR1-1HGQ9H1L0 117 aa7.97□□□□□ -1.13
CSMD1-203ENST00000518151 FBRSQ9HAH7 460 aa7.97□□□□□ -1.13
CSMD1-203ENST00000518151 LMCD1Q9NZU5 365 aa7.97□□□□□ -1.13
CSMD1-203ENST00000518151 PITPNM2Q9BZ72 1349 aa7.97□□□□□ -1.13
CSMD1-203ENST00000518151 CYP7A1P22680 504 aa7.96□□□□□ -1.14
CSMD1-203ENST00000518151 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.96□□□□□ -1.14
CSMD1-203ENST00000518151 CST3P01034 146 aaPredicted RBP7.95□□□□□ -1.14
CSMD1-203ENST00000518151 ZNF865P0CJ78 1059 aaPredicted RBP7.95□□□□□ -1.14
CSMD1-203ENST00000518151 GRK4P32298 578 aa7.95□□□□□ -1.14
CSMD1-203ENST00000518151 LIG3P49916 1009 aa7.95□□□□□ -1.14
CSMD1-203ENST00000518151 PDE4BQ07343 736 aa7.95□□□□□ -1.14
CSMD1-203ENST00000518151 LETMD1Q6P1Q0 360 aa7.95□□□□□ -1.14
CSMD1-203ENST00000518151 CARMIL2Q6F5E8 1435 aa7.95□□□□□ -1.14
CSMD1-203ENST00000518151 C8AP07357 584 aa7.94□□□□□ -1.14
CSMD1-203ENST00000518151 PDIA4P13667 645 aaKnown RBP7.94□□□□□ -1.14
CSMD1-203ENST00000518151 ST13P50502 369 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms