RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 PDE3AQ14432 1141 aa12.87□□□□□ -0.35
SPIDR-205ENST00000518060 FASTKD5Q7L8L6 764 aaKnown RBP12.87□□□□□ -0.35
SPIDR-205ENST00000518060 SIRT2Q8IXJ6 389 aa12.87□□□□□ -0.35
SPIDR-205ENST00000518060 ARHGAP39Q9C0H5 1083 aa12.87□□□□□ -0.35
SPIDR-205ENST00000518060 DHX36Q9H2U1 1008 aaKnown RBP12.87□□□□□ -0.35
SPIDR-205ENST00000518060 ANTXR1Q9H6X2 564 aa12.87□□□□□ -0.35
SPIDR-205ENST00000518060 PI4KBQ9UBF8 816 aa12.87□□□□□ -0.35
SPIDR-205ENST00000518060 PTPN22Q9Y2R2 807 aa12.87□□□□□ -0.35
SPIDR-205ENST00000518060 COL2A1P02458 1487 aaPredicted RBP12.86□□□□□ -0.35
SPIDR-205ENST00000518060 GOLIM4O00461 696 aa12.86□□□□□ -0.35
SPIDR-205ENST00000518060 RAB11FIP3O75154 756 aa12.86□□□□□ -0.35
SPIDR-205ENST00000518060 MYCP01106 439 aaPredicted RBP12.86□□□□□ -0.35
SPIDR-205ENST00000518060 CYP2C8P10632 490 aa12.86□□□□□ -0.35
SPIDR-205ENST00000518060 RGS19P49795 217 aa12.86□□□□□ -0.35
SPIDR-205ENST00000518060 PPP4CP60510 307 aa12.86□□□□□ -0.35
SPIDR-205ENST00000518060 LACTBP83111 547 aaPredicted RBP12.86□□□□□ -0.35
SPIDR-205ENST00000518060 TTF1Q15361 905 aaPredicted RBP12.86□□□□□ -0.35
SPIDR-205ENST00000518060 HERC5Q9UII4 1024 aaKnown RBP12.86□□□□□ -0.35
SPIDR-205ENST00000518060 PALD1Q9ULE6 856 aa12.86□□□□□ -0.35
SPIDR-205ENST00000518060 A0A0G2JLL6 359 aaPredicted RBP12.85□□□□□ -0.35
SPIDR-205ENST00000518060 TBC1D12O60347 775 aa12.85□□□□□ -0.35
SPIDR-205ENST00000518060 FMNL1O95466 1100 aaPredicted RBP12.85□□□□□ -0.35
SPIDR-205ENST00000518060 CAP1Q01518 475 aa12.85□□□□□ -0.35
SPIDR-205ENST00000518060 SLC9C1Q4G0N8 1177 aa12.85□□□□□ -0.35
SPIDR-205ENST00000518060 PRRT2Q7Z6L0 340 aaPredicted RBP12.85□□□□□ -0.35
SPIDR-205ENST00000518060 SMCR8Q8TEV9 937 aaPredicted RBP12.85□□□□□ -0.35
SPIDR-205ENST00000518060 AFG3L2Q9Y4W6 797 aa12.85□□□□□ -0.35
SPIDR-205ENST00000518060 PTCH2Q9Y6C5 1203 aa12.85□□□□□ -0.35
SPIDR-205ENST00000518060 MAGEB6P1A0A0J9YX57 407 aa12.84□□□□□ -0.35
SPIDR-205ENST00000518060 IGSF3O75054 1194 aa12.84□□□□□ -0.35
SPIDR-205ENST00000518060 GDF11O95390 407 aa12.84□□□□□ -0.35
SPIDR-205ENST00000518060 MAP3K10Q02779 954 aa12.84□□□□□ -0.35
SPIDR-205ENST00000518060 SPP2Q13103 211 aa12.84□□□□□ -0.35
SPIDR-205ENST00000518060 MOGSQ13724 837 aa12.84□□□□□ -0.35
SPIDR-205ENST00000518060 SLC9C2Q5TAH2 1124 aa12.84□□□□□ -0.35
SPIDR-205ENST00000518060 GPAT2Q6NUI2 795 aa12.84□□□□□ -0.35
SPIDR-205ENST00000518060 CERS3Q8IU89 383 aa12.84□□□□□ -0.35
SPIDR-205ENST00000518060 DOCK1Q14185 1865 aa12.83□□□□□ -0.36
SPIDR-205ENST00000518060 SMARCA5O60264 1052 aaPredicted RBP12.83□□□□□ -0.36
SPIDR-205ENST00000518060 PDE6AP16499 860 aa12.83□□□□□ -0.36
SPIDR-205ENST00000518060 CAP2P40123 477 aa12.83□□□□□ -0.36
SPIDR-205ENST00000518060 PSMC4P43686 418 aa12.83□□□□□ -0.36
SPIDR-205ENST00000518060 HMGCS2P54868 508 aa12.83□□□□□ -0.36
SPIDR-205ENST00000518060 C17orf99Q6UX52 265 aa12.83□□□□□ -0.36
SPIDR-205ENST00000518060 ZNF280CQ8ND82 737 aa12.83□□□□□ -0.36
SPIDR-205ENST00000518060 LRRCC1Q9C099 1032 aa12.83□□□□□ -0.36
SPIDR-205ENST00000518060 BOLA2Q9H3K6 86 aa12.83□□□□□ -0.36
SPIDR-205ENST00000518060 AS3MTQ9HBK9 375 aa12.83□□□□□ -0.36
SPIDR-205ENST00000518060 USP17L5A8MUK1 530 aa12.82□□□□□ -0.36
SPIDR-205ENST00000518060 FCGRTP55899 365 aa12.82□□□□□ -0.36
SPIDR-205ENST00000518060 RRP1BQ14684 758 aaKnown RBP12.82□□□□□ -0.36
SPIDR-205ENST00000518060 EDC3Q96F86 508 aaKnown RBP12.82□□□□□ -0.36
SPIDR-205ENST00000518060 TMOD4Q9NZQ9 345 aa12.82□□□□□ -0.36
SPIDR-205ENST00000518060 PNMA3Q9UL41 463 aa12.82□□□□□ -0.36
SPIDR-205ENST00000518060 AGTPBP1Q9UPW5 1226 aa12.82□□□□□ -0.36
SPIDR-205ENST00000518060 ADGRA2Q96PE1 1338 aa12.82□□□□□ -0.36
SPIDR-205ENST00000518060 ZNF532Q9HCE3 1301 aa12.82□□□□□ -0.36
SPIDR-205ENST00000518060 POLR3DP05423 398 aaPredicted RBP12.81□□□□□ -0.36
SPIDR-205ENST00000518060 ASNSP08243 561 aa12.81□□□□□ -0.36
SPIDR-205ENST00000518060 HOXD10P28358 340 aa12.81□□□□□ -0.36
SPIDR-205ENST00000518060 PABPC4Q13310 644 aaKnown RBP eCLIP12.81□□□□□ -0.36
SPIDR-205ENST00000518060 MTMR2Q13614 643 aa12.81□□□□□ -0.36
SPIDR-205ENST00000518060 SHROOM1Q2M3G4 852 aaPredicted RBP12.81□□□□□ -0.36
SPIDR-205ENST00000518060 TREML2Q5T2D2 321 aa12.81□□□□□ -0.36
SPIDR-205ENST00000518060 NBPF11Q86T75 865 aa12.81□□□□□ -0.36
SPIDR-205ENST00000518060 FOXP4Q8IVH2 680 aaPredicted RBP12.81□□□□□ -0.36
SPIDR-205ENST00000518060 RAET1EQ8TD07 263 aa12.81□□□□□ -0.36
SPIDR-205ENST00000518060 SH3TC2Q8TF17 1288 aa12.81□□□□□ -0.36
SPIDR-205ENST00000518060 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.81□□□□□ -0.36
SPIDR-205ENST00000518060 ARMC5Q96C12 935 aa12.81□□□□□ -0.36
SPIDR-205ENST00000518060 TRIM47Q96LD4 638 aa12.81□□□□□ -0.36
SPIDR-205ENST00000518060 TMEM106CQ9BVX2 250 aa12.81□□□□□ -0.36
SPIDR-205ENST00000518060 TBC1D2Q9BYX2 928 aa12.81□□□□□ -0.36
SPIDR-205ENST00000518060 CRNKL1Q9BZJ0 848 aaKnown RBP12.81□□□□□ -0.36
SPIDR-205ENST00000518060 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.81□□□□□ -0.363e-6■■■■■ 34.1
SPIDR-205ENST00000518060 DNAJC18Q9H819 358 aa12.81□□□□□ -0.36
SPIDR-205ENST00000518060 PAG1Q9NWQ8 432 aa12.81□□□□□ -0.36
SPIDR-205ENST00000518060 MYPNQ86TC9 1320 aa12.81□□□□□ -0.36
SPIDR-205ENST00000518060 GNRH1P01148 92 aa12.8□□□□□ -0.36
SPIDR-205ENST00000518060 OSBPP22059 807 aa12.8□□□□□ -0.36
SPIDR-205ENST00000518060 TMED8Q6PL24 325 aaPredicted RBP12.8□□□□□ -0.36
SPIDR-205ENST00000518060 TTC6Q86TZ1 520 aa12.8□□□□□ -0.36
SPIDR-205ENST00000518060 ANKRD13CQ8N6S4 541 aa12.8□□□□□ -0.36
SPIDR-205ENST00000518060 PROCA1Q8NCQ7 364 aaPredicted RBP12.8□□□□□ -0.36
SPIDR-205ENST00000518060 GPATCH3Q96I76 525 aa12.8□□□□□ -0.36
SPIDR-205ENST00000518060 FEZ1Q99689 392 aa12.8□□□□□ -0.36
SPIDR-205ENST00000518060 BIN2Q9UBW5 565 aaPredicted RBP12.8□□□□□ -0.36
SPIDR-205ENST00000518060 SERPINB13Q9UIV8 391 aa12.8□□□□□ -0.36
SPIDR-205ENST00000518060 TAOK2Q9UL54 1235 aa12.8□□□□□ -0.36
SPIDR-205ENST00000518060 ZBTB21Q9ULJ3 1066 aa12.8□□□□□ -0.36
SPIDR-205ENST00000518060 SLC45A1Q9Y2W3 748 aa12.8□□□□□ -0.36
SPIDR-205ENST00000518060 POTEFA5A3E0 1075 aa12.79□□□□□ -0.36
SPIDR-205ENST00000518060 TNPO2O14787 897 aaKnown RBP12.79□□□□□ -0.36
SPIDR-205ENST00000518060 MBD4O95243 580 aa12.79□□□□□ -0.36
SPIDR-205ENST00000518060 GH2P01242 217 aa12.79□□□□□ -0.36
SPIDR-205ENST00000518060 ATP5JP18859 108 aa12.79□□□□□ -0.36
SPIDR-205ENST00000518060 CTGFP29279 349 aa12.79□□□□□ -0.36
SPIDR-205ENST00000518060 PRMT2P55345 433 aa12.79□□□□□ -0.36
SPIDR-205ENST00000518060 RRP1P56182 461 aaKnown RBP12.79□□□□□ -0.36
SPIDR-205ENST00000518060 IRX3P78415 501 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms