RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 SUCLG2Q96I99 432 aa8.6□□□□□ -1.03
CPS1-210ENST00000518043 NIFKQ9BYG3 293 aaKnown RBP8.6□□□□□ -1.03
CPS1-210ENST00000518043 SRP68Q9UHB9 627 aaKnown RBP8.6□□□□□ -1.03
CPS1-210ENST00000518043 LRRFIP2Q9Y608 721 aaKnown RBP8.6□□□□□ -1.03
CPS1-210ENST00000518043 LRP5O75197 1615 aa8.6□□□□□ -1.03
CPS1-210ENST00000518043 USP42Q9H9J4 1324 aaKnown RBP8.59□□□□□ -1.03
CPS1-210ENST00000518043 PNMA6EA0A0J9YXQ4 647 aa8.59□□□□□ -1.03
CPS1-210ENST00000518043 GNAI3P08754 354 aa8.59□□□□□ -1.03
CPS1-210ENST00000518043 PSMA6P60900 246 aaKnown RBP8.59□□□□□ -1.03
CPS1-210ENST00000518043 POU4F2Q12837 409 aa8.59□□□□□ -1.03
CPS1-210ENST00000518043 MTX1Q13505 466 aa8.59□□□□□ -1.03
CPS1-210ENST00000518043 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.59□□□□□ -1.03
CPS1-210ENST00000518043 KIF6Q6ZMV9 814 aa8.59□□□□□ -1.03
CPS1-210ENST00000518043 NLRP10Q86W26 655 aa8.59□□□□□ -1.03
CPS1-210ENST00000518043 SMC5Q8IY18 1101 aa8.59□□□□□ -1.03
CPS1-210ENST00000518043 JARID2Q92833 1246 aaPredicted RBP8.59□□□□□ -1.03
CPS1-210ENST00000518043 CXXC1Q9P0U4 656 aaPredicted RBP8.59□□□□□ -1.03
CPS1-210ENST00000518043 NARFQ9UHQ1 456 aa8.59□□□□□ -1.03
CPS1-210ENST00000518043 NRXN2Q9P2S2 1712 aa8.59□□□□□ -1.03
CPS1-210ENST00000518043 SOBPA7XYQ1 873 aa8.58□□□□□ -1.04
CPS1-210ENST00000518043 PPP1R12BO60237 982 aaPredicted RBP8.58□□□□□ -1.04
CPS1-210ENST00000518043 GNAI2P04899 355 aa8.58□□□□□ -1.04
CPS1-210ENST00000518043 UBTFL1P0CB47 393 aaPredicted RBP8.58□□□□□ -1.04
CPS1-210ENST00000518043 SSFA2P28290 1259 aa8.58□□□□□ -1.04
CPS1-210ENST00000518043 TEAD4Q15561 434 aa8.58□□□□□ -1.04
CPS1-210ENST00000518043 RABL6Q3YEC7 729 aaPredicted RBP8.58□□□□□ -1.04
CPS1-210ENST00000518043 C4orf17Q53FE4 359 aa8.58□□□□□ -1.04
CPS1-210ENST00000518043 CENPQQ7L2Z9 268 aaPredicted RBP8.58□□□□□ -1.04
CPS1-210ENST00000518043 TAS1R3Q7RTX0 852 aa8.58□□□□□ -1.04
CPS1-210ENST00000518043 CCDC191Q8NCU4 936 aa8.58□□□□□ -1.04
CPS1-210ENST00000518043 A0A087WZG4 1122 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 NTSR2O95665 410 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 RHOQP17081 205 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 GPTP24298 496 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 NOS2P35228 1153 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 PHKA2P46019 1235 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 FOXO4P98177 505 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 ATP8B2P98198 1209 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 NEXNQ0ZGT2 675 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 EZH2Q15910 746 aaKnown RBP8.57□□□□□ -1.04
CPS1-210ENST00000518043 USPL1Q5W0Q7 1092 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 UBE3BQ7Z3V4 1068 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 DEFB132Q7Z7B7 95 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 RPAP2Q8IXW5 612 aaPredicted RBP8.57□□□□□ -1.04
CPS1-210ENST00000518043 SYNE4Q8N205 404 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 STAG2Q8N3U4 1231 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 SSH3Q8TE77 659 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 ZDHHC1Q8WTX9 485 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 CHMP4BQ9H444 224 aaKnown RBP8.57□□□□□ -1.04
CPS1-210ENST00000518043 CWC25Q9NXE8 425 aaPredicted RBP8.57□□□□□ -1.04
CPS1-210ENST00000518043 CHMP3Q9Y3E7 222 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 A0A1B0GUL6 1792 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 ANKRD31Q8N7Z5 1873 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 ABCC12Q96J65 1359 aa8.57□□□□□ -1.04
CPS1-210ENST00000518043 PNPLA7Q6ZV29 1317 aa8.56□□□□□ -1.04
CPS1-210ENST00000518043 CDHR2Q9BYE9 1310 aa8.56□□□□□ -1.04
CPS1-210ENST00000518043 SERTM1A2A2V5 107 aa8.56□□□□□ -1.04
CPS1-210ENST00000518043 POTECB2RU33 542 aa8.56□□□□□ -1.04
CPS1-210ENST00000518043 PCCAP05165 728 aaPredicted RBP8.56□□□□□ -1.04
CPS1-210ENST00000518043 SNRPBP14678 240 aaKnown RBP8.56□□□□□ -1.04
CPS1-210ENST00000518043 PLA2G4AP47712 749 aa8.56□□□□□ -1.04
CPS1-210ENST00000518043 RFX5P48382 616 aaPredicted RBP8.56□□□□□ -1.04
CPS1-210ENST00000518043 HSP90AB3PQ58FF7 597 aa8.56□□□□□ -1.04
CPS1-210ENST00000518043 WDR44Q5JSH3 913 aa8.56□□□□□ -1.04
CPS1-210ENST00000518043 SUSD4Q5VX71 490 aa8.56□□□□□ -1.04
CPS1-210ENST00000518043 TBC1D9BQ66K14 1250 aa8.56□□□□□ -1.04
CPS1-210ENST00000518043 PHLDB3Q6NSJ2 640 aa8.56□□□□□ -1.04
CPS1-210ENST00000518043 CLEC4GQ6UXB4 293 aa8.56□□□□□ -1.04
CPS1-210ENST00000518043 PPP1R42Q7Z4L9 355 aa8.56□□□□□ -1.04
CPS1-210ENST00000518043 C2orf49Q9BVC5 232 aaPredicted RBP8.56□□□□□ -1.04
CPS1-210ENST00000518043 PLA2G12BQ9BX93 195 aa8.56□□□□□ -1.04
CPS1-210ENST00000518043 BICC1Q9H694 974 aaKnown RBP8.56□□□□□ -1.04
CPS1-210ENST00000518043 DCTPP1Q9H773 170 aa8.56□□□□□ -1.04
CPS1-210ENST00000518043 RTCBQ9Y3I0 505 aaKnown RBP8.56□□□□□ -1.04
CPS1-210ENST00000518043 PARP3Q9Y6F1 533 aa8.56□□□□□ -1.04
CPS1-210ENST00000518043 TAF1P21675 1872 aa8.55□□□□□ -1.04
CPS1-210ENST00000518043 SPEF2Q9C093 1822 aa8.55□□□□□ -1.04
CPS1-210ENST00000518043 EML1O00423 815 aa8.55□□□□□ -1.04
CPS1-210ENST00000518043 GYS1P13807 737 aa8.55□□□□□ -1.04
CPS1-210ENST00000518043 ZBTB38Q8NAP3 1195 aaPredicted RBP8.55□□□□□ -1.04
CPS1-210ENST00000518043 C1orf216Q8TAB5 229 aa8.55□□□□□ -1.04
CPS1-210ENST00000518043 RWDD1Q9H446 243 aaPredicted RBP8.55□□□□□ -1.04
CPS1-210ENST00000518043 C9orf78Q9NZ63 289 aaPredicted RBP8.55□□□□□ -1.04
CPS1-210ENST00000518043 ZNF232Q9UNY5 417 aa8.55□□□□□ -1.04
CPS1-210ENST00000518043 BRD1O95696 1058 aa8.54□□□□□ -1.04
CPS1-210ENST00000518043 HIRAP54198 1017 aaPredicted RBP8.54□□□□□ -1.04
CPS1-210ENST00000518043 DDR1Q08345 913 aa8.54□□□□□ -1.04
CPS1-210ENST00000518043 TRAPPC3LQ5T215 181 aa8.54□□□□□ -1.04
CPS1-210ENST00000518043 SH3PXD2AQ5TCZ1 1133 aa8.54□□□□□ -1.04
CPS1-210ENST00000518043 COL23A1Q86Y22 540 aaPredicted RBP8.54□□□□□ -1.04
CPS1-210ENST00000518043 FAM89AQ96GI7 184 aa8.54□□□□□ -1.04
CPS1-210ENST00000518043 MKNK1Q9BUB5 465 aa8.54□□□□□ -1.04
CPS1-210ENST00000518043 TIMMDC1Q9NPL8 285 aa8.54□□□□□ -1.04
CPS1-210ENST00000518043 NIP7Q9Y221 180 aaKnown RBP eCLIP8.54□□□□□ -1.04
CPS1-210ENST00000518043 COL11A2P13942 1736 aaPredicted RBP8.54□□□□□ -1.04
CPS1-210ENST00000518043 RIC1Q4ADV7 1423 aa8.54□□□□□ -1.04
CPS1-210ENST00000518043 CARMIL3Q8ND23 1372 aa8.53□□□□□ -1.04
CPS1-210ENST00000518043 SRGAP3O43295 1099 aa8.53□□□□□ -1.04
CPS1-210ENST00000518043 CSF1RP07333 972 aa8.53□□□□□ -1.04
CPS1-210ENST00000518043 NUCB1Q02818 461 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms