RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 SH3RF3Q8TEJ3 882 aaPredicted RBP13.75□□□□□ -0.21
SPIDR-203ENST00000517693 ZNF396Q96N95 335 aaPredicted RBP13.75□□□□□ -0.21
SPIDR-203ENST00000517693 GZF1Q9H116 711 aaPredicted RBP13.75□□□□□ -0.21
SPIDR-203ENST00000517693 MKRN1Q9UHC7 482 aaKnown RBP13.75□□□□□ -0.21
SPIDR-203ENST00000517693 FIBPO43427 364 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 POLR3DP05423 398 aaPredicted RBP13.74□□□□□ -0.21
SPIDR-203ENST00000517693 DNM1Q05193 864 aaKnown RBP13.74□□□□□ -0.21
SPIDR-203ENST00000517693 RESTQ13127 1097 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 STRIP1Q5VSL9 837 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 BRAPQ7Z569 592 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 USP48Q86UV5 1035 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 RTKN2Q8IZC4 609 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 ZNF654Q8IZM8 581 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 MRIQ9BWK5 157 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 TAOK2Q9UL54 1235 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 CNPY2Q9Y2B0 182 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 TSPY2A6NKD2 308 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 IFNAR1P17181 557 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 HDLBPQ00341 1268 aaKnown RBP13.74□□□□□ -0.21
SPIDR-203ENST00000517693 SSRP1Q08945 709 aaKnown RBP13.74□□□□□ -0.21
SPIDR-203ENST00000517693 FOXD4L6Q3SYB3 417 aaPredicted RBP13.74□□□□□ -0.21
SPIDR-203ENST00000517693 CCDC93Q567U6 631 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 HHIPL2Q6UWX4 724 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 FOXD4L3Q6VB84 417 aaPredicted RBP13.74□□□□□ -0.21
SPIDR-203ENST00000517693 DEFB132Q7Z7B7 95 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 SLC51AQ86UW1 340 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 TTLL6Q8N841 843 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 TGFBRAP1Q8WUH2 860 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 TEKT1Q969V4 418 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 VPS33BQ9H267 617 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 MKNK2Q9HBH9 465 aa13.74□□□□□ -0.21
SPIDR-203ENST00000517693 GOLGA6L4A6NEF3 574 aa13.73□□□□□ -0.21
SPIDR-203ENST00000517693 SEC23AQ15436 765 aa13.73□□□□□ -0.21
SPIDR-203ENST00000517693 CAVIN1Q6NZI2 390 aaKnown RBP13.73□□□□□ -0.21
SPIDR-203ENST00000517693 FERMT3Q86UX7 667 aa13.73□□□□□ -0.21
SPIDR-203ENST00000517693 TTF2Q9UNY4 1162 aaKnown RBP13.73□□□□□ -0.21
SPIDR-203ENST00000517693 SLX4Q8IY92 1834 aa13.72□□□□□ -0.21
SPIDR-203ENST00000517693 LETM1O95202 739 aaPredicted RBP13.72□□□□□ -0.21
SPIDR-203ENST00000517693 FMNL1O95466 1100 aaPredicted RBP13.72□□□□□ -0.21
SPIDR-203ENST00000517693 XBP1P17861 261 aa13.72□□□□□ -0.21
SPIDR-203ENST00000517693 POLD1P28340 1107 aa13.72□□□□□ -0.21
SPIDR-203ENST00000517693 CHRNA5P30532 468 aa13.72□□□□□ -0.21
SPIDR-203ENST00000517693 AKAP17AQ02040 695 aaKnown RBP13.72□□□□□ -0.21
SPIDR-203ENST00000517693 KIAA2012Q0VF49 1180 aa13.72□□□□□ -0.21
SPIDR-203ENST00000517693 ZNF444Q8N0Y2 327 aaPredicted RBP13.72□□□□□ -0.21
SPIDR-203ENST00000517693 ENAHQ8N8S7 591 aaPredicted RBP13.72□□□□□ -0.21
SPIDR-203ENST00000517693 FBXO18Q8NFZ0 1043 aa13.72□□□□□ -0.21
SPIDR-203ENST00000517693 SPATA32Q96LK8 384 aa13.72□□□□□ -0.21
SPIDR-203ENST00000517693 INCENPQ9NQS7 918 aa13.72□□□□□ -0.21
SPIDR-203ENST00000517693 DAGLAQ9Y4D2 1042 aa13.72□□□□□ -0.21
SPIDR-203ENST00000517693 TACC3Q9Y6A5 838 aa13.72□□□□□ -0.21
SPIDR-203ENST00000517693 FLT1P17948 1338 aa13.72□□□□□ -0.21
SPIDR-203ENST00000517693 DDX60LQ5H9U9 1706 aaKnown RBP13.72□□□□□ -0.21
SPIDR-203ENST00000517693 FOCADQ5VW36 1801 aa13.72□□□□□ -0.21
SPIDR-203ENST00000517693 CYP2D7A0A087X1C5 515 aa13.71□□□□□ -0.21
SPIDR-203ENST00000517693 ECE2O60344 883 aa13.71□□□□□ -0.21
SPIDR-203ENST00000517693 USP17L8P0C7I0 530 aa13.71□□□□□ -0.21
SPIDR-203ENST00000517693 FDPSP14324 419 aaKnown RBP13.71□□□□□ -0.21
SPIDR-203ENST00000517693 GRIK5Q16478 980 aa13.71□□□□□ -0.21
SPIDR-203ENST00000517693 DOK7Q18PE1 504 aa13.71□□□□□ -0.21
SPIDR-203ENST00000517693 TTC6Q86TZ1 520 aa13.71□□□□□ -0.21
SPIDR-203ENST00000517693 STK11IPQ8N1F8 1099 aa13.71□□□□□ -0.21
SPIDR-203ENST00000517693 FANCBQ8NB91 859 aa13.71□□□□□ -0.21
SPIDR-203ENST00000517693 GPT2Q8TD30 523 aa13.71□□□□□ -0.21
SPIDR-203ENST00000517693 C7orf43Q8WVR3 580 aa13.71□□□□□ -0.21
SPIDR-203ENST00000517693 ZKSCAN3Q9BRR0 538 aa13.71□□□□□ -0.21
SPIDR-203ENST00000517693 ALG1Q9BT22 464 aa13.71□□□□□ -0.21
SPIDR-203ENST00000517693 TCP11L1Q9NUJ3 509 aa13.71□□□□□ -0.21
SPIDR-203ENST00000517693 RBM27Q9P2N5 1060 aaKnown RBP13.71□□□□□ -0.21
SPIDR-203ENST00000517693 KIF13BQ9NQT8 1826 aa13.71□□□□□ -0.21
SPIDR-203ENST00000517693 MYO3BQ8WXR4 1341 aa13.71□□□□□ -0.22
SPIDR-203ENST00000517693 USP17L3A6NCW0 530 aa13.71□□□□□ -0.22
SPIDR-203ENST00000517693 USP17L4A6NCW7 530 aa13.71□□□□□ -0.22
SPIDR-203ENST00000517693 DEXIO95424 95 aa13.71□□□□□ -0.22
SPIDR-203ENST00000517693 KIF5BP33176 963 aa13.71□□□□□ -0.22
SPIDR-203ENST00000517693 ADD1P35611 737 aaKnown RBP13.71□□□□□ -0.22
SPIDR-203ENST00000517693 RHBDL3P58872 404 aa13.71□□□□□ -0.22
SPIDR-203ENST00000517693 ZNF445P59923 1031 aa13.71□□□□□ -0.22
SPIDR-203ENST00000517693 USP17L1Q7RTZ2 530 aa13.71□□□□□ -0.22
SPIDR-203ENST00000517693 DGKHQ86XP1 1220 aa13.71□□□□□ -0.22
SPIDR-203ENST00000517693 MAPKAPK5Q8IW41 473 aa13.71□□□□□ -0.22
SPIDR-203ENST00000517693 CTCFLQ8NI51 663 aaPredicted RBP13.71□□□□□ -0.22
SPIDR-203ENST00000517693 PSMD1Q99460 953 aa13.71□□□□□ -0.22
SPIDR-203ENST00000517693 MAP3K14Q99558 947 aa13.71□□□□□ -0.22
SPIDR-203ENST00000517693 TSPY3P0CV98 308 aa13.7□□□□□ -0.22
SPIDR-203ENST00000517693 TSPY8P0CW00 308 aa13.7□□□□□ -0.22
SPIDR-203ENST00000517693 CDC27P30260 824 aa13.7□□□□□ -0.22
SPIDR-203ENST00000517693 MRE11P49959 708 aa13.7□□□□□ -0.22
SPIDR-203ENST00000517693 TGFB2P61812 414 aa13.7□□□□□ -0.22
SPIDR-203ENST00000517693 GNL2Q13823 731 aaKnown RBP13.7□□□□□ -0.22
SPIDR-203ENST00000517693 SAFBQ15424 915 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPIDR-203ENST00000517693 NTRK3Q16288 839 aa13.7□□□□□ -0.22
SPIDR-203ENST00000517693 PPP4R3BQ5MIZ7 849 aa13.7□□□□□ -0.22
SPIDR-203ENST00000517693 C16orf86Q6ZW13 317 aa13.7□□□□□ -0.22
SPIDR-203ENST00000517693 NUP133Q8WUM0 1156 aa13.7□□□□□ -0.22
SPIDR-203ENST00000517693 RNF26Q9BY78 433 aaPredicted RBP13.7□□□□□ -0.22
SPIDR-203ENST00000517693 GDPD2Q9HCC8 539 aa13.7□□□□□ -0.22
SPIDR-203ENST00000517693 TCHHQ07283 1943 aa13.7□□□□□ -0.22
SPIDR-203ENST00000517693 MYH15Q9Y2K3 1946 aa13.7□□□□□ -0.22
SPIDR-203ENST00000517693 CDK5RAP2Q96SN8 1893 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms