RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 SPATA1Q5VX52 437 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 NOSTRINQ8IVI9 506 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 PANX2Q96RD6 677 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 CTNND2Q9UQB3 1225 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 MROH1Q8NDA8 1641 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 RTL9Q8NET4 1388 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 MED23Q9ULK4 1368 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 GOLGA6BA6NDN3 693 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 AKR1B10O60218 316 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 KRT9P35527 623 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 MATR3P43243 847 aaKnown RBP eCLIP7.52□□□□□ -1.21
CPNE3-203ENST00000517490 GOLGA8FQ08AF8 430 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 GOLGA8DPQ0D2H9 430 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 PHKBQ93100 1093 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 CABP5Q9NP86 173 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.52□□□□□ -1.21
CPNE3-203ENST00000517490 NRKQ7Z2Y5 1582 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 CPS1P31327 1500 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 B4E1Z4 1266 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 STARD3NLO95772 234 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 GNAT2P19087 354 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 UBA7P41226 1012 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 STAT6P42226 847 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 AMPD3Q01432 767 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 MUM1L1Q5H9M0 696 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 ESR2Q92731 530 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 RBM33Q96EV2 1170 aaKnown RBP7.52□□□□□ -1.21
CPNE3-203ENST00000517490 DRC1Q96MC2 740 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 FAN1Q9Y2M0 1017 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 PLEKHG1Q9ULL1 1385 aa7.52□□□□□ -1.21
CPNE3-203ENST00000517490 CCDC194A0A1B0GVG4 234 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 MYCNP04198 464 aaPredicted RBP7.51□□□□□ -1.21
CPNE3-203ENST00000517490 INPP5BP32019 993 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 VAV2P52735 878 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 PPFIA1Q13136 1202 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 XAGE2Q96GT9 111 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 DCAF5Q96JK2 942 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 CCDC42Q96M95 316 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 CLIC6Q96NY7 704 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 VPS16Q9H269 839 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 SLC52A2Q9HAB3 445 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 KCND1Q9NSA2 647 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 RANBP6O60518 1105 aaKnown RBP7.51□□□□□ -1.21
CPNE3-203ENST00000517490 GCP02774 474 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 IDEP14735 1019 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 EFCAB13Q8IY85 973 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 ENGASEQ8NFI3 743 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 FERMT2Q96AC1 680 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 ZBTB9Q96C00 473 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 TSG101Q99816 390 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 SLF1Q9BQI6 1058 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 MRFAP1Q9Y605 127 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 SAR1BQ9Y6B6 198 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 MAST3O60307 1309 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 OVOS2A0A0J9YW53 1432 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 OVOS2Q6IE36 1432 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 PAK1Q13153 545 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 WWC2Q6AWC2 1192 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 MAATS1Q7Z4T9 603 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 TMX4Q9H1E5 349 aaPredicted RBP7.51□□□□□ -1.21
CPNE3-203ENST00000517490 FAM204AQ9H8W3 233 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 FHOD1Q9Y613 1164 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 FGAP02671 866 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 MAGEA9P43362 315 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 SOGA3Q5TF21 947 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 PROSER2Q86WR7 435 aaPredicted RBP7.51□□□□□ -1.21
CPNE3-203ENST00000517490 ARFGAP2Q8N6H7 521 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 JAKMIP2Q96AA8 810 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 PSD3Q9NYI0 1048 aa7.51□□□□□ -1.21
CPNE3-203ENST00000517490 CALM1P0DP23 149 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 CALM2P0DP24 149 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 CALM3P0DP25 149 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 ADD1P35611 737 aaKnown RBP7.5□□□□□ -1.21
CPNE3-203ENST00000517490 PTPN12Q05209 780 aaKnown RBP7.5□□□□□ -1.21
CPNE3-203ENST00000517490 TDRD12Q587J7 1177 aaKnown RBP7.5□□□□□ -1.21
CPNE3-203ENST00000517490 HAUS4Q9H6D7 363 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 BMP2KQ9NSY1 1161 aaPredicted RBP7.5□□□□□ -1.21
CPNE3-203ENST00000517490 TCP11L1Q9NUJ3 509 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 MAN1B1Q9UKM7 699 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 BICDL2A1A5D9 508 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 KIF5BP33176 963 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 NF2P35240 595 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 IGHMBP2P38935 993 aaKnown RBP7.5□□□□□ -1.21
CPNE3-203ENST00000517490 PPP2R5BQ15173 497 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 RESP18Q5W5W9 173 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 TOM1L2Q6ZVM7 507 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 SLC35F6Q8N357 371 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 NUP58Q9BVL2 599 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 TEX13AQ9BXU3 409 aaPredicted RBP7.5□□□□□ -1.21
CPNE3-203ENST00000517490 SLC4A4Q9Y6R1 1079 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 PATL2C9JE40 543 aaKnown RBP7.5□□□□□ -1.21
CPNE3-203ENST00000517490 NDUFAB1O14561 156 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 PLA2G4AP47712 749 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 HLTFQ14527 1009 aaKnown RBP eCLIP7.5□□□□□ -1.21
CPNE3-203ENST00000517490 CASP8Q14790 479 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 CFAP58Q5T655 872 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 GBP6Q6ZN66 633 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 MYCBPQ99417 103 aaPredicted RBP7.5□□□□□ -1.21
CPNE3-203ENST00000517490 ZCCHC17Q9NP64 241 aaKnown RBP7.5□□□□□ -1.21
CPNE3-203ENST00000517490 EXOC1Q9NV70 894 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms