RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 SAP30BPQ9UHR5 308 aaKnown RBP13.45□□□□□ -0.26
SCARNA20-201ENST00000516768 DOCK2Q92608 1830 aa13.44□□□□□ -0.26
SCARNA20-201ENST00000516768 IRF6O14896 467 aa13.44□□□□□ -0.26
SCARNA20-201ENST00000516768 PTPRAP18433 802 aa13.44□□□□□ -0.26
SCARNA20-201ENST00000516768 GTF2A2P52657 109 aa13.44□□□□□ -0.26
SCARNA20-201ENST00000516768 LBX1P52954 281 aa13.44□□□□□ -0.26
SCARNA20-201ENST00000516768 TTC6Q86TZ1 520 aa13.44□□□□□ -0.26
SCARNA20-201ENST00000516768 TICAM2Q86XR7 235 aa13.44□□□□□ -0.26
SCARNA20-201ENST00000516768 SCYL3Q8IZE3 742 aa13.44□□□□□ -0.26
SCARNA20-201ENST00000516768 APPBP2Q92624 585 aa13.44□□□□□ -0.26
SCARNA20-201ENST00000516768 EVI5LQ96CN4 794 aa13.44□□□□□ -0.26
SCARNA20-201ENST00000516768 OTUD5Q96G74 571 aa13.44□□□□□ -0.26
SCARNA20-201ENST00000516768 STRBPQ96SI9 672 aaKnown RBP13.44□□□□□ -0.26
SCARNA20-201ENST00000516768 DCP1AQ9NPI6 582 aaPredicted RBP13.44□□□□□ -0.26
SCARNA20-201ENST00000516768 ATP8A2Q9NTI2 1148 aa13.44□□□□□ -0.26
SCARNA20-201ENST00000516768 SAGE1Q9NXZ1 904 aa13.44□□□□□ -0.26
SCARNA20-201ENST00000516768 FAM196BA6NMK8 535 aa13.43□□□□□ -0.26
SCARNA20-201ENST00000516768 PRKAB2O43741 272 aa13.43□□□□□ -0.26
SCARNA20-201ENST00000516768 MBD4O95243 580 aa13.43□□□□□ -0.26
SCARNA20-201ENST00000516768 HLA-DOAP06340 250 aa13.43□□□□□ -0.26
SCARNA20-201ENST00000516768 HSPA8P11142 646 aaKnown RBP13.43□□□□□ -0.26
SCARNA20-201ENST00000516768 CAP2P40123 477 aa13.43□□□□□ -0.26
SCARNA20-201ENST00000516768 PLCD1P51178 756 aa13.43□□□□□ -0.26
SCARNA20-201ENST00000516768 PPIL2Q13356 520 aa13.43□□□□□ -0.26
SCARNA20-201ENST00000516768 IFNL1Q8IU54 200 aa13.43□□□□□ -0.26
SCARNA20-201ENST00000516768 SDR42E1Q8WUS8 393 aa13.43□□□□□ -0.26
SCARNA20-201ENST00000516768 PTPN18Q99952 460 aa13.43□□□□□ -0.26
SCARNA20-201ENST00000516768 PRDM10Q9NQV6 1147 aa13.43□□□□□ -0.26
SCARNA20-201ENST00000516768 THSD7BQ9C0I4 1608 aa13.42□□□□□ -0.26
SCARNA20-201ENST00000516768 ALDH1A1P00352 501 aa13.42□□□□□ -0.26
SCARNA20-201ENST00000516768 POLR3DP05423 398 aaPredicted RBP13.42□□□□□ -0.26
SCARNA20-201ENST00000516768 RRP1BQ14684 758 aaKnown RBP13.42□□□□□ -0.26
SCARNA20-201ENST00000516768 OTUD7BQ6GQQ9 843 aa13.42□□□□□ -0.26
SCARNA20-201ENST00000516768 CRACR2BQ8N4Y2 399 aaPredicted RBP13.42□□□□□ -0.26
SCARNA20-201ENST00000516768 FSD1Q9BTV5 496 aa13.42□□□□□ -0.26
SCARNA20-201ENST00000516768 EHD4Q9H223 541 aa13.42□□□□□ -0.26
SCARNA20-201ENST00000516768 DNAJC18Q9H819 358 aa13.42□□□□□ -0.26
SCARNA20-201ENST00000516768 PICK1Q9NRD5 415 aa13.42□□□□□ -0.26
SCARNA20-201ENST00000516768 MCM9Q9NXL9 1143 aa13.42□□□□□ -0.26
SCARNA20-201ENST00000516768 SERPINB13Q9UIV8 391 aa13.42□□□□□ -0.26
SCARNA20-201ENST00000516768 TSKSQ9UJT2 592 aa13.42□□□□□ -0.26
SCARNA20-201ENST00000516768 KCNH4Q9UQ05 1017 aa13.42□□□□□ -0.26
SCARNA20-201ENST00000516768 AFG3L2Q9Y4W6 797 aa13.42□□□□□ -0.26
SCARNA20-201ENST00000516768 SLC4A4Q9Y6R1 1079 aa13.42□□□□□ -0.26
SCARNA20-201ENST00000516768 ZHX2Q9Y6X8 837 aa13.42□□□□□ -0.26
SCARNA20-201ENST00000516768 MAST2Q6P0Q8 1798 aa13.41□□□□□ -0.26
SCARNA20-201ENST00000516768 IGF2BP3O00425 579 aaKnown RBP eCLIP13.41□□□□□ -0.26
SCARNA20-201ENST00000516768 CXCL11O14625 94 aa13.41□□□□□ -0.26
SCARNA20-201ENST00000516768 CETPP11597 493 aa13.41□□□□□ -0.26
SCARNA20-201ENST00000516768 SNAPC2Q13487 334 aa13.41□□□□□ -0.26
SCARNA20-201ENST00000516768 ZMYM1Q5SVZ6 1142 aa13.41□□□□□ -0.26
SCARNA20-201ENST00000516768 TATDN1Q6P1N9 297 aa13.41□□□□□ -0.26
SCARNA20-201ENST00000516768 BRI3BPQ8WY22 251 aa13.41□□□□□ -0.26
SCARNA20-201ENST00000516768 CFHR5Q9BXR6 569 aa13.41□□□□□ -0.26
SCARNA20-201ENST00000516768 CCL15-CCL14A0A0B4J2E2 113 aa13.4□□□□□ -0.26
SCARNA20-201ENST00000516768 GSG1L2A8MUP6 293 aa13.4□□□□□ -0.26
SCARNA20-201ENST00000516768 PATL2C9JE40 543 aaKnown RBP13.4□□□□□ -0.26
SCARNA20-201ENST00000516768 USP17L12C9JPN9 530 aa13.4□□□□□ -0.26
SCARNA20-201ENST00000516768 USP17L21D6R901 530 aa13.4□□□□□ -0.26
SCARNA20-201ENST00000516768 TBC1D8O95759 1140 aa13.4□□□□□ -0.26
SCARNA20-201ENST00000516768 PDE4AP27815 886 aa13.4□□□□□ -0.26
SCARNA20-201ENST00000516768 GABPAQ06546 454 aa13.4□□□□□ -0.26
SCARNA20-201ENST00000516768 CCL15Q16663 113 aa13.4□□□□□ -0.26
SCARNA20-201ENST00000516768 SLC4A8Q2Y0W8 1093 aa13.4□□□□□ -0.26
SCARNA20-201ENST00000516768 COL13A1Q5TAT6 717 aaPredicted RBP13.4□□□□□ -0.26
SCARNA20-201ENST00000516768 GIMAP6Q6P9H5 292 aa13.4□□□□□ -0.26
SCARNA20-201ENST00000516768 SEC62Q99442 399 aaKnown RBP13.4□□□□□ -0.26
SCARNA20-201ENST00000516768 TRIM34Q9BYJ4 488 aa13.4□□□□□ -0.26
SCARNA20-201ENST00000516768 GINM1Q9NU53 330 aa13.4□□□□□ -0.26
SCARNA20-201ENST00000516768 TAOK2Q9UL54 1235 aa13.4□□□□□ -0.26
SCARNA20-201ENST00000516768 USP17L5A8MUK1 530 aa13.39□□□□□ -0.27
SCARNA20-201ENST00000516768 TRIM6-TRIM34B2RNG4 842 aa13.39□□□□□ -0.27
SCARNA20-201ENST00000516768 GPAA1O43292 621 aa13.39□□□□□ -0.27
SCARNA20-201ENST00000516768 GNAT2P19087 354 aa13.39□□□□□ -0.27
SCARNA20-201ENST00000516768 JAG1P78504 1218 aa13.39□□□□□ -0.27
SCARNA20-201ENST00000516768 C12orf60Q5U649 245 aa13.39□□□□□ -0.27
SCARNA20-201ENST00000516768 CTR9Q6PD62 1173 aa13.39□□□□□ -0.27
SCARNA20-201ENST00000516768 RILPL2Q969X0 211 aa13.39□□□□□ -0.27
SCARNA20-201ENST00000516768 DDRGK1Q96HY6 314 aa13.39□□□□□ -0.27
SCARNA20-201ENST00000516768 BTBD19C9JJ37 291 aa13.38□□□□□ -0.27
SCARNA20-201ENST00000516768 M0R2C6 588 aa13.38□□□□□ -0.27
SCARNA20-201ENST00000516768 ASNSP08243 561 aa13.38□□□□□ -0.27
SCARNA20-201ENST00000516768 MOGSQ13724 837 aa13.38□□□□□ -0.27
SCARNA20-201ENST00000516768 CERKLQ49MI3 558 aaPredicted RBP13.38□□□□□ -0.27
SCARNA20-201ENST00000516768 SBK1Q52WX2 424 aa13.38□□□□□ -0.27
SCARNA20-201ENST00000516768 NOM1Q5C9Z4 860 aaKnown RBP13.38□□□□□ -0.27
SCARNA20-201ENST00000516768 FAM43AQ8N2R8 423 aa13.38□□□□□ -0.27
SCARNA20-201ENST00000516768 TBC1D2Q9BYX2 928 aa13.38□□□□□ -0.27
SCARNA20-201ENST00000516768 R3HDMLQ9H3Y0 253 aa13.38□□□□□ -0.27
SCARNA20-201ENST00000516768 HELLSQ9NRZ9 838 aa13.38□□□□□ -0.27
SCARNA20-201ENST00000516768 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.38□□□□□ -0.27
SCARNA20-201ENST00000516768 FOCADQ5VW36 1801 aa13.37□□□□□ -0.27
SCARNA20-201ENST00000516768 CYP2D6P10635 497 aa13.37□□□□□ -0.27
SCARNA20-201ENST00000516768 SHMT1P34896 483 aa13.37□□□□□ -0.27
SCARNA20-201ENST00000516768 EVX2Q03828 476 aa13.37□□□□□ -0.27
SCARNA20-201ENST00000516768 SPP2Q13103 211 aa13.37□□□□□ -0.27
SCARNA20-201ENST00000516768 FASTKD5Q7L8L6 764 aaKnown RBP13.37□□□□□ -0.27
SCARNA20-201ENST00000516768 ZNF280CQ8ND82 737 aa13.37□□□□□ -0.27
SCARNA20-201ENST00000516768 WDR18Q9BV38 432 aa13.37□□□□□ -0.27
SCARNA20-201ENST00000516768 ZCCHC17Q9NP64 241 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms