RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 RMND1Q9NWS8 449 aa11.58□□□□□ -0.56
SMG7-215ENST00000515829 ZSCAN20P17040 1043 aaPredicted RBP11.58□□□□□ -0.56
SMG7-215ENST00000515829 HDXQ7Z353 690 aa11.58□□□□□ -0.56
SMG7-215ENST00000515829 HEATR3Q7Z4Q2 680 aa11.58□□□□□ -0.56
SMG7-215ENST00000515829 SMARCC2Q8TAQ2 1214 aa11.58□□□□□ -0.56
SMG7-215ENST00000515829 FRMPD1Q5SYB0 1578 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 BMP15O95972 392 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 PHKA1P46020 1223 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 CCDC122Q5T0U0 273 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 SPATA5Q8NB90 893 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 GREM2Q9H772 168 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 NIP7Q9Y221 180 aaKnown RBP eCLIP11.57□□□□□ -0.56
SMG7-215ENST00000515829 LUC7L2Q9Y383 392 aaKnown RBP11.57□□□□□ -0.56
SMG7-215ENST00000515829 ERBB3P21860 1342 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 CEP170BQ9Y4F5 1589 aaPredicted RBP11.57□□□□□ -0.56
SMG7-215ENST00000515829 VIRMAQ69YN4 1812 aaKnown RBP11.57□□□□□ -0.56
SMG7-215ENST00000515829 GOLGA6L10A6NI86 522 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 TMEM232C9JQI7 657 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 KIF5BP33176 963 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 PAFAH1B1P43034 410 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 SMYD4Q8IYR2 804 aaPredicted RBP11.57□□□□□ -0.56
SMG7-215ENST00000515829 IFNL3Q8IZI9 196 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.57□□□□□ -0.56
SMG7-215ENST00000515829 MACROD2A1Z1Q3 448 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 EFCAB8A8MWE9 144 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 IBSPP21815 317 aaPredicted RBP11.57□□□□□ -0.56
SMG7-215ENST00000515829 KRT9P35527 623 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 PDE4BQ07343 736 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 PUM3Q15397 648 aaKnown RBP11.57□□□□□ -0.56
SMG7-215ENST00000515829 DNAJC21Q5F1R6 531 aaKnown RBP11.57□□□□□ -0.56
SMG7-215ENST00000515829 AKNAD1Q5T1N1 836 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 ST7Q9NRC1 585 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 MYO1BO43795 1136 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 MCM3P25205 808 aa11.57□□□□□ -0.56
SMG7-215ENST00000515829 COL9A3Q14050 684 aaPredicted RBP11.57□□□□□ -0.56
SMG7-215ENST00000515829 CDC5LQ99459 802 aaKnown RBP11.57□□□□□ -0.56
SMG7-215ENST00000515829 SEC63Q9UGP8 760 aaKnown RBP11.57□□□□□ -0.56
SMG7-215ENST00000515829 GNAT2P19087 354 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 NR5A1Q13285 461 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 WWC2Q6AWC2 1192 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 NAPGQ99747 312 aaPredicted RBP11.56□□□□□ -0.56
SMG7-215ENST00000515829 SAMSN1Q9NSI8 373 aaKnown RBP11.56□□□□□ -0.56
SMG7-215ENST00000515829 PSMA7O14818 248 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 ERCC3P19447 782 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 GPR161Q8N6U8 529 aaKnown RBP11.56□□□□□ -0.56
SMG7-215ENST00000515829 EEF2KMTQ96G04 330 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 ZNF609O15014 1411 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 ERLIN2O94905 339 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 CYLC1P35663 651 aaPredicted RBP11.56□□□□□ -0.56
SMG7-215ENST00000515829 ASIC1P78348 528 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 TSGA10IPQ3SY00 556 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 ARMCX5Q6P1M9 558 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 KLHL34Q8N239 644 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 KAZALD1Q96I82 304 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 RABEP2Q9H5N1 569 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 EXOC1Q9NV70 894 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 ANKIB1Q9P2G1 1089 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 SHTN1A0MZ66 631 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 IKBKBO14920 756 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 TERF2Q15554 542 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 ANKRD7Q92527 254 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 HINFPQ9BQA5 517 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 CCZ1BP86790 482 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 CCZ1P86791 482 aaPredicted RBP11.56□□□□□ -0.56
SMG7-215ENST00000515829 SDR42E1Q8WUS8 393 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 WWC3Q9ULE0 1092 aa11.56□□□□□ -0.56
SMG7-215ENST00000515829 KIF28PB7ZC32 967 aa11.55□□□□□ -0.56
SMG7-215ENST00000515829 SF3B2Q13435 895 aaKnown RBP11.55□□□□□ -0.56
SMG7-215ENST00000515829 ZFYVE27Q5T4F4 411 aa11.55□□□□□ -0.56
SMG7-215ENST00000515829 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMG7-215ENST00000515829 MMRN2Q9H8L6 949 aa11.55□□□□□ -0.56
SMG7-215ENST00000515829 TTC38Q5R3I4 469 aa11.55□□□□□ -0.56
SMG7-215ENST00000515829 ZNF654Q8IZM8 581 aa11.55□□□□□ -0.56
SMG7-215ENST00000515829 LPIN2Q92539 896 aa11.55□□□□□ -0.56
SMG7-215ENST00000515829 TAF4BQ92750 862 aa11.55□□□□□ -0.56
SMG7-215ENST00000515829 FAM107BQ9H098 131 aa11.55□□□□□ -0.56
SMG7-215ENST00000515829 ALDH8A1Q9H2A2 487 aaPredicted RBP11.55□□□□□ -0.56
SMG7-215ENST00000515829 GPR108Q9NPR9 543 aa11.55□□□□□ -0.56
SMG7-215ENST00000515829 RTL9Q8NET4 1388 aa11.55□□□□□ -0.56
SMG7-215ENST00000515829 ADAMTS2O95450 1211 aa11.55□□□□□ -0.56
SMG7-215ENST00000515829 CRNKL1Q9BZJ0 848 aaKnown RBP11.55□□□□□ -0.56
SMG7-215ENST00000515829 MED23Q9ULK4 1368 aa11.55□□□□□ -0.56
SMG7-215ENST00000515829 CYP27B1O15528 508 aa11.55□□□□□ -0.56
SMG7-215ENST00000515829 KRT86O43790 486 aa11.55□□□□□ -0.56
SMG7-215ENST00000515829 CSRNP2Q9H175 543 aa11.55□□□□□ -0.56
SMG7-215ENST00000515829 CTDNEP1O95476 244 aa11.54□□□□□ -0.56
SMG7-215ENST00000515829 ATP6V1AP38606 617 aa11.54□□□□□ -0.56
SMG7-215ENST00000515829 ANKRD18AQ8IVF6 992 aa11.54□□□□□ -0.56
SMG7-215ENST00000515829 VSTM4Q8IW00 320 aa11.54□□□□□ -0.56
SMG7-215ENST00000515829 SYNE4Q8N205 404 aa11.54□□□□□ -0.56
SMG7-215ENST00000515829 CCDC42Q96M95 316 aa11.54□□□□□ -0.56
SMG7-215ENST00000515829 PYM1Q9BRP8 204 aaKnown RBP11.54□□□□□ -0.56
SMG7-215ENST00000515829 SEPT11Q9NVA2 429 aaKnown RBP11.54□□□□□ -0.56
SMG7-215ENST00000515829 H7C1W4 665 aa11.54□□□□□ -0.56
SMG7-215ENST00000515829 PRKAB2O43741 272 aa11.54□□□□□ -0.56
SMG7-215ENST00000515829 PDE8AO60658 829 aa11.54□□□□□ -0.56
SMG7-215ENST00000515829 GYS2P54840 703 aa11.54□□□□□ -0.56
SMG7-215ENST00000515829 PPP6R2O75170 966 aa11.54□□□□□ -0.56
SMG7-215ENST00000515829 PNMA6AP0CW24 399 aaPredicted RBP11.54□□□□□ -0.56
SMG7-215ENST00000515829 KIF5AQ12840 1032 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms