RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 ZNF532Q9HCE3 1301 aa15.47■□□□□ 0.07
CLCN3-210ENST00000515420 PTPRFP10586 1907 aa15.47■□□□□ 0.07
CLCN3-210ENST00000515420 CCL15-CCL14A0A0B4J2E2 113 aa15.47■□□□□ 0.07
CLCN3-210ENST00000515420 MAGEB6P1A0A0J9YX57 407 aa15.47■□□□□ 0.07
CLCN3-210ENST00000515420 ERC2O15083 957 aa15.47■□□□□ 0.07
CLCN3-210ENST00000515420 ADD2P35612 726 aa15.47■□□□□ 0.07
CLCN3-210ENST00000515420 UBE3CQ15386 1083 aa15.47■□□□□ 0.07
CLCN3-210ENST00000515420 CCL15Q16663 113 aa15.47■□□□□ 0.07
CLCN3-210ENST00000515420 IFFO2Q5TF58 517 aa15.47■□□□□ 0.07
CLCN3-210ENST00000515420 ZSCAN25Q6NSZ9 544 aa15.47■□□□□ 0.07
CLCN3-210ENST00000515420 FOXP4Q8IVH2 680 aaPredicted RBP15.47■□□□□ 0.07
CLCN3-210ENST00000515420 MAPKAPK5Q8IW41 473 aa15.47■□□□□ 0.07
CLCN3-210ENST00000515420 NAV1Q8NEY1 1877 aa15.47■□□□□ 0.07
CLCN3-210ENST00000515420 BRI3BPQ8WY22 251 aa15.47■□□□□ 0.07
CLCN3-210ENST00000515420 RNF216Q9NWF9 866 aaPredicted RBP15.47■□□□□ 0.07
CLCN3-210ENST00000515420 ZBTB47Q9UFB7 747 aaPredicted RBP15.47■□□□□ 0.07
CLCN3-210ENST00000515420 CXCL11O14625 94 aa15.46■□□□□ 0.07
CLCN3-210ENST00000515420 HLA-DOAP06340 250 aa15.46■□□□□ 0.07
CLCN3-210ENST00000515420 PTPRAP18433 802 aa15.46■□□□□ 0.07
CLCN3-210ENST00000515420 EDC3Q96F86 508 aaKnown RBP15.46■□□□□ 0.07
CLCN3-210ENST00000515420 PTPN18Q99952 460 aa15.46■□□□□ 0.07
CLCN3-210ENST00000515420 TBC1D2Q9BYX2 928 aa15.46■□□□□ 0.07
CLCN3-210ENST00000515420 CRNKL1Q9BZJ0 848 aaKnown RBP15.46■□□□□ 0.07
CLCN3-210ENST00000515420 PICK1Q9NRD5 415 aa15.46■□□□□ 0.07
CLCN3-210ENST00000515420 SUPT16HQ9Y5B9 1047 aaKnown RBP15.46■□□□□ 0.07
CLCN3-210ENST00000515420 GPR25O00155 361 aa15.45■□□□□ 0.06
CLCN3-210ENST00000515420 TBC1D8O95759 1140 aa15.45■□□□□ 0.06
CLCN3-210ENST00000515420 USP5P45974 858 aa15.45■□□□□ 0.06
CLCN3-210ENST00000515420 EHD4Q9H223 541 aa15.45■□□□□ 0.06
CLCN3-210ENST00000515420 RWDD1Q9H446 243 aaPredicted RBP15.45■□□□□ 0.06
CLCN3-210ENST00000515420 GINM1Q9NU53 330 aa15.45■□□□□ 0.06
CLCN3-210ENST00000515420 TAOK2Q9UL54 1235 aa15.45■□□□□ 0.06
CLCN3-210ENST00000515420 SALL3Q9BXA9 1300 aa15.44■□□□□ 0.06
CLCN3-210ENST00000515420 GLRX3O76003 335 aaKnown RBP15.44■□□□□ 0.06
CLCN3-210ENST00000515420 MX1P20591 662 aa15.44■□□□□ 0.06
CLCN3-210ENST00000515420 CAP2P40123 477 aa15.44■□□□□ 0.06
CLCN3-210ENST00000515420 TTC6Q86TZ1 520 aa15.44■□□□□ 0.06
CLCN3-210ENST00000515420 SMC5Q8IY18 1101 aa15.44■□□□□ 0.06
CLCN3-210ENST00000515420 KBTBD3Q8NAB2 608 aa15.44■□□□□ 0.06
CLCN3-210ENST00000515420 EXOC6Q8TAG9 804 aa15.44■□□□□ 0.06
CLCN3-210ENST00000515420 PALD1Q9ULE6 856 aa15.44■□□□□ 0.06
CLCN3-210ENST00000515420 FKTNO75072 461 aa15.43■□□□□ 0.06
CLCN3-210ENST00000515420 ZFYP08048 801 aaPredicted RBP15.43■□□□□ 0.06
CLCN3-210ENST00000515420 CRHR2Q13324 411 aa15.43■□□□□ 0.06
CLCN3-210ENST00000515420 LRRFIP1Q32MZ4 808 aaKnown RBP15.43■□□□□ 0.06
CLCN3-210ENST00000515420 ANKRD45Q5TZF3 282 aa15.43■□□□□ 0.06
CLCN3-210ENST00000515420 ANKRD23Q86SG2 305 aa15.43■□□□□ 0.06
CLCN3-210ENST00000515420 CRACR2BQ8N4Y2 399 aaPredicted RBP15.43■□□□□ 0.06
CLCN3-210ENST00000515420 PI4K2BQ8TCG2 481 aa15.43■□□□□ 0.06
CLCN3-210ENST00000515420 ZNF296Q8WUU4 475 aaPredicted RBP15.43■□□□□ 0.06
CLCN3-210ENST00000515420 TRIM34Q9BYJ4 488 aa15.43■□□□□ 0.06
CLCN3-210ENST00000515420 DNAJC18Q9H819 358 aa15.43■□□□□ 0.06
CLCN3-210ENST00000515420 AFG3L2Q9Y4W6 797 aa15.43■□□□□ 0.06
CLCN3-210ENST00000515420 ZHX2Q9Y6X8 837 aa15.43■□□□□ 0.06
CLCN3-210ENST00000515420 A0A0G2JLL6 359 aaPredicted RBP15.42■□□□□ 0.06
CLCN3-210ENST00000515420 FAM196BA6NMK8 535 aa15.42■□□□□ 0.06
CLCN3-210ENST00000515420 BTBD19C9JJ37 291 aa15.42■□□□□ 0.06
CLCN3-210ENST00000515420 ASNSP08243 561 aa15.42■□□□□ 0.06
CLCN3-210ENST00000515420 TAF1CQ15572 869 aaPredicted RBP15.42■□□□□ 0.06
CLCN3-210ENST00000515420 PRRT2Q7Z6L0 340 aaPredicted RBP15.42■□□□□ 0.06
CLCN3-210ENST00000515420 CTU1Q7Z7A3 348 aaKnown RBP15.42■□□□□ 0.06
CLCN3-210ENST00000515420 FAM43AQ8N2R8 423 aa15.42■□□□□ 0.06
CLCN3-210ENST00000515420 ZFYVE28Q9HCC9 887 aa15.42■□□□□ 0.06
CLCN3-210ENST00000515420 ATP8A2Q9NTI2 1148 aa15.42■□□□□ 0.06
CLCN3-210ENST00000515420 SAP30BPQ9UHR5 308 aaKnown RBP15.42■□□□□ 0.06
CLCN3-210ENST00000515420 SERPINB13Q9UIV8 391 aa15.42■□□□□ 0.06
CLCN3-210ENST00000515420 SLURP2P0DP57 97 aa15.41■□□□□ 0.06
CLCN3-210ENST00000515420 MOGSQ13724 837 aa15.41■□□□□ 0.06
CLCN3-210ENST00000515420 TSHZ3Q63HK5 1081 aa15.41■□□□□ 0.06
CLCN3-210ENST00000515420 FASTKD5Q7L8L6 764 aaKnown RBP15.41■□□□□ 0.06
CLCN3-210ENST00000515420 LCORLQ8N3X6 602 aa15.41■□□□□ 0.06
CLCN3-210ENST00000515420 R3HDMLQ9H3Y0 253 aa15.41■□□□□ 0.06
CLCN3-210ENST00000515420 DCP1AQ9NPI6 582 aaPredicted RBP15.41■□□□□ 0.06
CLCN3-210ENST00000515420 STAP2Q9UGK3 403 aa15.41■□□□□ 0.06
CLCN3-210ENST00000515420 LOC285556D6RIA3 1793 aa15.41■□□□□ 0.06
CLCN3-210ENST00000515420 USP17L5A8MUK1 530 aa15.4■□□□□ 0.06
CLCN3-210ENST00000515420 MBD4O95243 580 aa15.4■□□□□ 0.06
CLCN3-210ENST00000515420 DGKZQ13574 1117 aa15.4■□□□□ 0.06
CLCN3-210ENST00000515420 PKN2Q16513 984 aaKnown RBP15.4■□□□□ 0.06
CLCN3-210ENST00000515420 TATDN1Q6P1N9 297 aa15.4■□□□□ 0.06
CLCN3-210ENST00000515420 OTUD7AQ8TE49 926 aaPredicted RBP15.4■□□□□ 0.06
CLCN3-210ENST00000515420 MCOLN1Q9GZU1 580 aa15.4■□□□□ 0.06
CLCN3-210ENST00000515420 ARMT1Q9H993 441 aa15.4■□□□□ 0.06
CLCN3-210ENST00000515420 AS3MTQ9HBK9 375 aa15.4■□□□□ 0.06
CLCN3-210ENST00000515420 SLC45A1Q9Y2W3 748 aa15.4■□□□□ 0.06
CLCN3-210ENST00000515420 BAZ2AQ9UIF9 1905 aaKnown RBP15.4■□□□□ 0.06
CLCN3-210ENST00000515420 MYH8P13535 1937 aa15.39■□□□□ 0.05
CLCN3-210ENST00000515420 RNF113AO15541 343 aaKnown RBP15.39■□□□□ 0.05
CLCN3-210ENST00000515420 TLR2O60603 784 aa15.39■□□□□ 0.05
CLCN3-210ENST00000515420 RRP1BQ14684 758 aaKnown RBP15.39■□□□□ 0.05
CLCN3-210ENST00000515420 TICAM2Q86XR7 235 aa15.39■□□□□ 0.05
CLCN3-210ENST00000515420 PROCA1Q8NCQ7 364 aaPredicted RBP15.39■□□□□ 0.05
CLCN3-210ENST00000515420 APPBP2Q92624 585 aa15.39■□□□□ 0.05
CLCN3-210ENST00000515420 ERO1AQ96HE7 468 aa15.39■□□□□ 0.05
CLCN3-210ENST00000515420 MCM9Q9NXL9 1143 aa15.39■□□□□ 0.05
CLCN3-210ENST00000515420 PDHXO00330 501 aa15.38■□□□□ 0.05
CLCN3-210ENST00000515420 POLR3DP05423 398 aaPredicted RBP15.38■□□□□ 0.05
CLCN3-210ENST00000515420 PDE1AP54750 535 aa15.38■□□□□ 0.05
CLCN3-210ENST00000515420 SP3Q02447 781 aa15.38■□□□□ 0.05
CLCN3-210ENST00000515420 GABPAQ06546 454 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms