RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 MFSD2AQ8NA29 543 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 ARHGEF11O15085 1522 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 RSF1Q96T23 1441 aaPredicted RBP2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 NCAPD3P42695 1498 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 UPK3BL1B0FP48 263 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 UPK3BL2E5RIL1 263 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 TRPA1O75762 1119 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 NME1P15531 152 aaKnown RBP2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 ATP2B1P20020 1258 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 CLCQ05315 142 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 RASGRF1Q13972 1273 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 SNAP47Q5SQN1 464 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 GOLM1Q8NBJ4 401 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 DISC1Q9NRI5 854 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 ZNF214Q9UL59 606 aaPredicted RBP2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 TLR6Q9Y2C9 796 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 SLFN14P0C7P3 912 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 ADH5P11766 374 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 MAOBP27338 520 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 SNRPNP63162 240 aaKnown RBP2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 SLBPQ14493 270 aaKnown RBP eCLIP2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 NFE2L2Q16236 605 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 SYNPOQ8N3V7 929 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 SGSM3Q96HU1 749 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 CORO1BQ9BR76 489 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 SRRTQ9BXP5 876 aaKnown RBP2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 ZNF281Q9Y2X9 895 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 TBX22Q9Y458 520 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 KIF21AQ7Z4S6 1674 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 TLDC2A0PJX2 215 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 RNF225M0QZC1 329 aaPredicted RBP2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 RGS13O14921 159 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 RFPL3O75679 317 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 DNAJB8Q8NHS0 232 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 PLVAPQ9BX97 442 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 CEP41Q9BYV8 373 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 CYP4F12Q9HCS2 524 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 WDR97A6NE52 1622 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 KCNQ2O43526 872 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 H2AFB1P0C5Y9 115 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 H2AFB2P0C5Z0 115 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 COL8A1P27658 744 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 ASAP3Q8TDY4 903 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 GATA6Q92908 595 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 FAM83CQ9BQN1 747 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 GPN3Q9UHW5 284 aaPredicted RBP2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 PPP1R9AQ9ULJ8 1098 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 LRIG2O94898 1065 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 RASA3Q14644 834 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 PRRT3Q5FWE3 981 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 DMRTC2Q8IXT2 367 aaPredicted RBP2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 ATG4CQ96DT6 458 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 FANCD2OSQ96PS1 177 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 OSBPL2Q9H1P3 480 aa2.67□□□□□ -1.98
AC025539.1-201ENST00000515343 NEFMP07197 916 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 ZNF865P0CJ78 1059 aaPredicted RBP2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 GUCY2CP25092 1073 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 GSTM4Q03013 218 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 PDE4BQ07343 736 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 TRIM28Q13263 835 aaKnown RBP2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 ENOX1Q8TC92 643 aaKnown RBP2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 WDR89Q96FK6 387 aaPredicted RBP2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 TJP2Q9UDY2 1190 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 CCDC163A0A0D9SF12 145 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 A0A1W2PQH9 124 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 ACRP10323 421 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 TNNI2P48788 182 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 EIF6P56537 245 aaKnown RBP2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 NCAPHQ15003 741 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 HID1Q8IV36 788 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 ASPNQ9BXN1 380 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 PHAXQ9H814 394 aaKnown RBP2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 BRMS1Q9HCU9 246 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 CEP131Q9UPN4 1083 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 KRBA1A5PL33 1030 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 HTR3BO95264 441 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 WISP1O95388 367 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 CLEC10AQ8IUN9 316 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 ARMC10Q8N2F6 343 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 ACSF2Q96CM8 615 aaPredicted RBP2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 TMEM87BQ96K49 555 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 MYRFLQ96LU7 910 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 LNPKQ9C0E8 428 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 ZNF408Q9H9D4 720 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 PCDHB14Q9Y5E9 798 aa2.66□□□□□ -1.98
AC025539.1-201ENST00000515343 CNTNAP5Q8WYK1 1306 aa2.65□□□□□ -1.98
AC025539.1-201ENST00000515343 ECEL1O95672 775 aa2.65□□□□□ -1.98
AC025539.1-201ENST00000515343 SRFP11831 508 aa2.65□□□□□ -1.98
AC025539.1-201ENST00000515343 NOS3P29474 1203 aa2.65□□□□□ -1.98
AC025539.1-201ENST00000515343 NASPP49321 788 aaPredicted RBP2.65□□□□□ -1.98
AC025539.1-201ENST00000515343 KLHL6Q8WZ60 621 aa2.65□□□□□ -1.98
AC025539.1-201ENST00000515343 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.65□□□□□ -1.98
AC025539.1-201ENST00000515343 AKTIPQ9H8T0 292 aa2.65□□□□□ -1.98
AC025539.1-201ENST00000515343 KDM6BO15054 1643 aa2.65□□□□□ -1.98
AC025539.1-201ENST00000515343 PEG3Q9GZU2 1588 aa2.65□□□□□ -1.98
AC025539.1-201ENST00000515343 DNAJC25-GNG10A0A024R161 153 aa2.65□□□□□ -1.98
AC025539.1-201ENST00000515343 ITGB2P05107 769 aa2.65□□□□□ -1.98
AC025539.1-201ENST00000515343 PMS1P54277 932 aaKnown RBP2.65□□□□□ -1.98
AC025539.1-201ENST00000515343 SEPT6Q14141 434 aa2.65□□□□□ -1.98
AC025539.1-201ENST00000515343 INPP5AQ14642 412 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms