RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 CHMP3Q9Y3E7 222 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 ECM29Q5VYK3 1845 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 CICQ96RK0 1608 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 GCFC2P16383 781 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 UBE2HP62256 183 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 KMT5BQ4FZB7 885 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 ZFYVE27Q5T4F4 411 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 PIGBQ92521 554 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 N4BP2L2Q92802 583 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 PAG1Q9NWQ8 432 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 ASAP1Q9ULH1 1129 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 MRFAP1Q9Y605 127 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 LAMB2P55268 1798 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 C4AP0C0L4 1744 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 C4BP0C0L5 1744 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 A0A0G2JLW4 131 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 FIBPO43427 364 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 FMNL1O95466 1100 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 PYGBP11216 843 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 XBP1P17861 261 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 GCKP35557 465 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 FLT3P36888 993 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 TCIRG1Q13488 830 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 RBM12BQ8IXT5 1001 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 ELOA2Q8IYF1 753 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 BAG1Q99933 345 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 UTP6Q9NYH9 597 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 SUGT1Q9Y2Z0 365 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 BCL9O00512 1426 aa8.52□□□□□ -1.04
PDLIM5-219ENST00000514743 CA8P35219 290 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 PRPF4BQ13523 1007 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 NEDD9Q14511 834 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 NAA30Q147X3 362 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 ANKRD1Q15327 319 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 DBN1Q16643 649 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 SMCR8Q8TEV9 937 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 PARD3BQ8TEW8 1205 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 SLC4A9Q96Q91 983 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 FUCA2Q9BTY2 467 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 TMOD3Q9NYL9 352 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 SYNRGQ9UMZ2 1314 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 A0A1B0GUL6 1792 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 FAM200BP0CF97 657 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 ABL2P42684 1182 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 RBM6P78332 1123 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 SLC7A5Q01650 507 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 ICA1Q05084 483 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 TRIM28Q13263 835 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 ZMYM1Q5SVZ6 1142 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 DNAJC10Q8IXB1 793 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 IQCF2Q8IXL9 164 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 NEK1Q96PY6 1258 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 TRAIPQ9BWF2 469 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 TSPY26PQ9H489 355 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 AHDC1Q5TGY3 1603 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 CHD4Q14839 1912 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 MAST3O60307 1309 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 FOXP2O15409 715 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 NF2P35240 595 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 KRT32Q14532 448 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 CCDC183Q5T5S1 534 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 TMCO4Q5TGY1 634 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 TAF4BQ92750 862 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 SMARCE1Q969G3 411 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 SYAP1Q96A49 352 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 NEUROD6Q96NK8 337 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 PLA2G12BQ9BX93 195 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 HELLSQ9NRZ9 838 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 ATP6V1DQ9Y5K8 247 aa8.52□□□□□ -1.05
PDLIM5-219ENST00000514743 VPS37CA5D8V6 355 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-219ENST00000514743 CSF1RP07333 972 aa8.51□□□□□ -1.05
PDLIM5-219ENST00000514743 Q6ZUG5 572 aa8.51□□□□□ -1.05
PDLIM5-219ENST00000514743 TTC6Q86TZ1 520 aa8.51□□□□□ -1.05
PDLIM5-219ENST00000514743 C3orf20Q8ND61 904 aa8.51□□□□□ -1.05
PDLIM5-219ENST00000514743 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.51□□□□□ -1.05
PDLIM5-219ENST00000514743 AK7Q96M32 723 aa8.51□□□□□ -1.05
PDLIM5-219ENST00000514743 TTC12Q9H892 705 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-219ENST00000514743 IVLP07476 585 aa8.51□□□□□ -1.05
PDLIM5-219ENST00000514743 LMNB1P20700 586 aa8.51□□□□□ -1.05
PDLIM5-219ENST00000514743 LARP1BQ659C4 914 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-219ENST00000514743 STAG1Q8WVM7 1258 aa8.51□□□□□ -1.05
PDLIM5-219ENST00000514743 DSCC1Q9BVC3 393 aa8.51□□□□□ -1.05
PDLIM5-219ENST00000514743 AGXT2Q9BYV1 514 aa8.51□□□□□ -1.05
PDLIM5-219ENST00000514743 ARHGEF10LQ9HCE6 1279 aa8.51□□□□□ -1.05
PDLIM5-219ENST00000514743 M0R2C6 588 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 JAK2O60674 1132 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 PCCAP05165 728 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 CCDC175P0C221 793 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 ADORA1P30542 326 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 ALDH1B1P30837 517 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 RANBP1P43487 201 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 STK3Q13188 491 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 HLFQ16534 295 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 FAM173BQ6P4H8 233 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 CPLX2Q6PUV4 134 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 ARMC9Q7Z3E5 817 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 KIAA0825Q8IV33 1275 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 CTCFLQ8NI51 663 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 UNC45AQ9H3U1 944 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 BTG4Q9NY30 223 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms