RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 CHD8Q9HCK8 2581 aa4.2□□□□□ -1.74
CHD1-211ENST00000514344 BAHCC1Q9P281 2608 aa4.2□□□□□ -1.74
CHD1-211ENST00000514344 A0A0G2JLL6 359 aaPredicted RBP4.2□□□□□ -1.74
CHD1-211ENST00000514344 CXCL11O14625 94 aa4.2□□□□□ -1.74
CHD1-211ENST00000514344 ATMINO43313 823 aaPredicted RBP4.2□□□□□ -1.74
CHD1-211ENST00000514344 ZKSCAN1P17029 563 aaPredicted RBP4.2□□□□□ -1.74
CHD1-211ENST00000514344 AAK1Q2M2I8 961 aa4.2□□□□□ -1.74
CHD1-211ENST00000514344 GJC2Q5T442 439 aaPredicted RBP4.2□□□□□ -1.74
CHD1-211ENST00000514344 PRRT2Q7Z6L0 340 aaPredicted RBP4.2□□□□□ -1.74
CHD1-211ENST00000514344 CCDC191Q8NCU4 936 aa4.2□□□□□ -1.74
CHD1-211ENST00000514344 ANKS1AQ92625 1134 aa4.2□□□□□ -1.74
CHD1-211ENST00000514344 FERMT2Q96AC1 680 aa4.2□□□□□ -1.74
CHD1-211ENST00000514344 HOOK2Q96ED9 719 aa4.2□□□□□ -1.74
CHD1-211ENST00000514344 CD320Q9NPF0 282 aa4.2□□□□□ -1.74
CHD1-211ENST00000514344 PDLIM7Q9NR12 457 aa4.2□□□□□ -1.74
CHD1-211ENST00000514344 BRWD1Q9NSI6 2320 aa4.2□□□□□ -1.74
CHD1-211ENST00000514344 PRR33A8MZF0 331 aa4.2□□□□□ -1.74
CHD1-211ENST00000514344 SLURP2P0DP57 97 aa4.2□□□□□ -1.74
CHD1-211ENST00000514344 NFE2L2Q16236 605 aa4.2□□□□□ -1.74
CHD1-211ENST00000514344 CSPP1Q1MSJ5 1256 aa4.2□□□□□ -1.74
CHD1-211ENST00000514344 PICK1Q9NRD5 415 aa4.2□□□□□ -1.74
CHD1-211ENST00000514344 MYH3P11055 1940 aa4.19□□□□□ -1.74
CHD1-211ENST00000514344 RAG1P15918 1043 aa4.19□□□□□ -1.74
CHD1-211ENST00000514344 GYG1P46976 350 aa4.19□□□□□ -1.74
CHD1-211ENST00000514344 CHAF1AQ13111 956 aaPredicted RBP4.19□□□□□ -1.74
CHD1-211ENST00000514344 UBE3BQ7Z3V4 1068 aa4.19□□□□□ -1.74
CHD1-211ENST00000514344 TEKT1Q969V4 418 aa4.19□□□□□ -1.74
CHD1-211ENST00000514344 NUDT12Q9BQG2 462 aa4.19□□□□□ -1.74
CHD1-211ENST00000514344 DAGLAQ9Y4D2 1042 aa4.19□□□□□ -1.74
CHD1-211ENST00000514344 RIF1Q5UIP0 2472 aaKnown RBP4.19□□□□□ -1.74
CHD1-211ENST00000514344 PKD1L2Q7Z442 2459 aa4.19□□□□□ -1.74
CHD1-211ENST00000514344 PTPRAP18433 802 aa4.19□□□□□ -1.74
CHD1-211ENST00000514344 FKBP1AP62942 108 aaKnown RBP4.19□□□□□ -1.74
CHD1-211ENST00000514344 CWF19L2Q2TBE0 894 aaKnown RBP4.19□□□□□ -1.74
CHD1-211ENST00000514344 SLC39A5Q6ZMH5 540 aa4.19□□□□□ -1.74
CHD1-211ENST00000514344 FAM83AQ86UY5 434 aa4.19□□□□□ -1.74
CHD1-211ENST00000514344 CCAR1Q8IX12 1150 aaKnown RBP4.19□□□□□ -1.74
CHD1-211ENST00000514344 HYPKQ9NX55 129 aa4.19□□□□□ -1.74
CHD1-211ENST00000514344 AGTPBP1Q9UPW5 1226 aa4.19□□□□□ -1.74
CHD1-211ENST00000514344 AFG3L2Q9Y4W6 797 aa4.19□□□□□ -1.74
CHD1-211ENST00000514344 NDUFB9Q9Y6M9 179 aa4.19□□□□□ -1.74
CHD1-211ENST00000514344 MAPK8IP3Q9UPT6 1336 aa4.19□□□□□ -1.74
CHD1-211ENST00000514344 PLXNB2O15031 1838 aa4.19□□□□□ -1.74
CHD1-211ENST00000514344 FRMPD3Q5JV73 1810 aa4.19□□□□□ -1.74
CHD1-211ENST00000514344 TPRP12270 2363 aaKnown RBP4.19□□□□□ -1.74
CHD1-211ENST00000514344 PTPRFP10586 1907 aa4.18□□□□□ -1.74
CHD1-211ENST00000514344 DNM1LO00429 736 aa4.18□□□□□ -1.74
CHD1-211ENST00000514344 FRAT2O75474 233 aaPredicted RBP4.18□□□□□ -1.74
CHD1-211ENST00000514344 TLE2Q04725 743 aa4.18□□□□□ -1.74
CHD1-211ENST00000514344 NFIAQ12857 509 aa4.18□□□□□ -1.74
CHD1-211ENST00000514344 NEUROD2Q15784 382 aa4.18□□□□□ -1.74
CHD1-211ENST00000514344 SLC28A3Q9HAS3 691 aa4.18□□□□□ -1.74
CHD1-211ENST00000514344 ZNF112Q9UJU3 913 aa4.18□□□□□ -1.74
CHD1-211ENST00000514344 PNMA3Q9UL41 463 aa4.18□□□□□ -1.74
CHD1-211ENST00000514344 CHMP3Q9Y3E7 222 aa4.18□□□□□ -1.74
CHD1-211ENST00000514344 PI4K2BG5E9Z4 385 aa4.18□□□□□ -1.74
CHD1-211ENST00000514344 ELL2O00472 640 aaPredicted RBP4.18□□□□□ -1.74
CHD1-211ENST00000514344 PQBP1O60828 265 aaKnown RBP4.18□□□□□ -1.74
CHD1-211ENST00000514344 KRT37O76014 449 aa4.18□□□□□ -1.74
CHD1-211ENST00000514344 RIPK4P57078 832 aa4.18□□□□□ -1.74
CHD1-211ENST00000514344 FOXK2Q01167 660 aa4.18□□□□□ -1.74
CHD1-211ENST00000514344 FPGSQ05932 587 aa4.18□□□□□ -1.74
CHD1-211ENST00000514344 KRT40Q6A162 431 aa4.18□□□□□ -1.74
CHD1-211ENST00000514344 APOBEC3HQ6NTF7 200 aaKnown RBP4.18□□□□□ -1.74
CHD1-211ENST00000514344 LPAR1Q92633 364 aa4.18□□□□□ -1.74
CHD1-211ENST00000514344 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.18□□□□□ -1.743e-7■■■■■ 35.2
CHD1-211ENST00000514344 TMEM121BQ9BXQ6 578 aaPredicted RBP4.18□□□□□ -1.74
CHD1-211ENST00000514344 DDX20Q9UHI6 824 aaKnown RBP4.18□□□□□ -1.74
CHD1-211ENST00000514344 RLFQ13129 1914 aa4.18□□□□□ -1.74
CHD1-211ENST00000514344 LRRC37A2A6NM11 1700 aa4.18□□□□□ -1.74
CHD1-211ENST00000514344 ERC2O15083 957 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 XRCC5P13010 732 aaKnown RBP4.17□□□□□ -1.74
CHD1-211ENST00000514344 ADCYAP1R1P41586 468 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 HMGCS2P54868 508 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 NOL9Q5SY16 702 aaKnown RBP4.17□□□□□ -1.74
CHD1-211ENST00000514344 WDR78Q5VTH9 848 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 SCYL3Q8IZE3 742 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 SOCS4Q8WXH5 440 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 PLEKHF1Q96S99 279 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 ASCC2Q9H1I8 757 aaPredicted RBP4.17□□□□□ -1.74
CHD1-211ENST00000514344 NKX2-4Q9H2Z4 354 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 MAP3K2Q9Y2U5 619 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 SLC45A1Q9Y2W3 748 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 TACC3Q9Y6A5 838 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 ZNF318Q5VUA4 2279 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 KBTBD13C9JR72 458 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 APBB1O00213 710 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 RFXAPO00287 272 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 TLL1O43897 1013 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 IGKV5-2P06315 115 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 SSTR3P32745 418 aaPredicted RBP4.17□□□□□ -1.74
CHD1-211ENST00000514344 CYP2C19P33261 490 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 GCLCP48506 637 aaPredicted RBP4.17□□□□□ -1.74
CHD1-211ENST00000514344 VPS37DQ86XT2 251 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 ZSCAN29Q8IWY8 852 aaPredicted RBP4.17□□□□□ -1.74
CHD1-211ENST00000514344 ZFPM1Q8IX07 1006 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 TDRD7Q8NHU6 1098 aaKnown RBP4.17□□□□□ -1.74
CHD1-211ENST00000514344 FAM151AQ8WW52 585 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 ZDHHC15Q96MV8 337 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 METTL22Q9BUU2 404 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms