RNA–Protein interactions for RNA: ENST00000514232.1

SMARCAD1-208, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, human

TSL 3

Gene SMARCAD1, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCAD1-208	ENST00000514232	FNBP4	Q8N3X1	1017 aa	Predicted RBP	4.26	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	PMEPA1	Q969W9	287 aa		4.26	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	KRTAP3-1	Q9BYR8	98 aa		4.26	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	DNAJC25	Q9H1X3	360 aa		4.26	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	SLAMF8	Q9P0V8	285 aa		4.26	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	GTF3C3	Q9Y5Q9	886 aa		4.26	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	FAM196B	A6NMK8	535 aa		4.25	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	CILP	O75339	1184 aa		4.25	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	TRHR	P34981	398 aa	Predicted RBP	4.25	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	PDE3A	Q14432	1141 aa		4.25	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	VMAC	Q2NL98	169 aa		4.25	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	ZFYVE27	Q5T4F4	411 aa		4.25	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	KANK4	Q5T7N3	995 aa	Predicted RBP	4.25	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	ISL2	Q96A47	359 aa		4.25	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	SIGLEC10	Q96LC7	697 aa		4.25	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	MAFB	Q9Y5Q3	323 aa	Predicted RBP	4.25	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	GNAT3	A8MTJ3	354 aa		4.24	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	CYR61	O00622	381 aa		4.24	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	EREG	O14944	169 aa		4.24	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	RNGTT	O60942	597 aa	Known RBP	4.24	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	B3GALT4	O96024	378 aa		4.24	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	C6	P13671	934 aa		4.24	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	EDN3	P14138	238 aa		4.24	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	LIG1	P18858	919 aa		4.24	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	SLC6A17	Q9H1V8	727 aa		4.24	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	LATS2	Q9NRM7	1088 aa		4.24	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	TFIP11	Q9UBB9	837 aa	Known RBP	4.24	□□□□□ -1.73
SMARCAD1-208	ENST00000514232		A0A096LPE4	126 aa		4.23	□□□□□ -1.73
SMARCAD1-208	ENST00000514232		A0A1W2PPZ6	126 aa		4.23	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	ZNF862	O60290	1169 aa		4.23	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	EOMES	O95936	686 aa		4.23	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	GDF5	P43026	501 aa		4.23	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	KIF4B	Q2VIQ3	1234 aa		4.23	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	TMEM132E	Q6IEE7	984 aa		4.23	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	ZFPM1	Q8IX07	1006 aa		4.23	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	GLMN	Q92990	594 aa		4.23	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	CALR3	Q96L12	384 aa	Known RBP	4.23	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	CCDC86	Q9H6F5	360 aa	Known RBP	4.23	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	PRDM10	Q9NQV6	1147 aa		4.23	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	TMEM59L	Q9UK28	342 aa		4.23	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	IRAK3	Q9Y616	596 aa		4.23	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	TACR2	P21452	398 aa		4.22	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	HK2	P52789	917 aa		4.22	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	CDCA8	Q53HL2	280 aa		4.22	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	TP53I13	Q8NBR0	393 aa	Predicted RBP	4.22	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	GGNBP2	Q9H3C7	697 aa		4.22	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	TNFRSF18	Q9Y5U5	241 aa		4.22	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	ST14	Q9Y5Y6	855 aa		4.22	□□□□□ -1.73
SMARCAD1-208	ENST00000514232	PRR33	A8MZF0	331 aa		4.21	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	SLFN14	P0C7P3	912 aa		4.21	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	RFX1	P22670	979 aa		4.21	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	KRTAP5-11	Q6L8G4	156 aa		4.21	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	CAPN12	Q6ZSI9	719 aa		4.21	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	INTS4	Q96HW7	963 aa	Known RBP	4.21	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	FOXQ1	Q9C009	403 aa		4.21	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	STIM2	Q9P246	746 aa		4.21	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	MBD1	Q9UIS9	605 aa	Predicted RBP	4.21	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	MAPK8IP1	Q9UQF2	711 aa		4.21	□□□□□ -1.74
SMARCAD1-208	ENST00000514232		A6NHS1	94 aa		4.2	□□□□□ -1.74
SMARCAD1-208	ENST00000514232		H3BS24	57 aa		4.2	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	LMOD1	P29536	600 aa	Predicted RBP	4.2	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	GRIA4	P48058	902 aa		4.2	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	KRTAP10-9	P60411	292 aa		4.2	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	SPRED3	Q2MJR0	410 aa		4.2	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	TIGD5	Q53EQ6	642 aa		4.2	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	C22orf34	Q6ZV56	151 aa		4.2	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	CCNJL	Q8IV13	435 aa		4.2	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	VWCE	Q96DN2	955 aa		4.2	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	NAF1	Q96HR8	494 aa	Known RBP	4.2	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	C1QTNF3	Q9BXJ4	246 aa		4.2	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	YBX2	Q9Y2T7	364 aa	Known RBP	4.2	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	ARID3C	A6NKF2	412 aa		4.19	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	RPLP1	P05386	114 aa	Known RBP	4.19	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	OCLN	Q16625	522 aa		4.19	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	CDKAL1	Q5VV42	579 aa		4.19	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	THAP5	Q7Z6K1	395 aa		4.19	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	ZNF575	Q86XF7	245 aa		4.19	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	LINC01356	Q8N9X3	169 aa		4.19	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	PPP1R12C	Q9BZL4	782 aa		4.19	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	C19orf44	Q9H6X5	657 aa		4.19	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	IRS4	O14654	1257 aa	Predicted RBP	4.18	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	ESR1	P03372	595 aa		4.18	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	EPHB3	P54753	998 aa		4.18	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	AP3B2	Q13367	1082 aa		4.18	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	ATCAY	Q86WG3	371 aa		4.18	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	ABTB2	Q8N961	1025 aa		4.18	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	DDX54	Q8TDD1	881 aa	Known RBP	4.18	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	TCF12	Q99081	682 aa		4.18	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	ADAMTS10	Q9H324	1103 aa		4.18	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	CWC22	Q9HCG8	908 aa	Known RBP	4.18	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	PRDM5	Q9NQX1	630 aa	Predicted RBP	4.18	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	CPZ	Q66K79	652 aa		4.17	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	CRIP3	Q6Q6R5	217 aa		4.17	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	TMEFF1	Q8IYR6	380 aa		4.17	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	LILRA2	Q8N149	483 aa		4.17	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	PRIMPOL	Q96LW4	560 aa		4.17	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	PCED1A	Q9H1Q7	454 aa		4.17	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	SMPD4	Q9NXE4	827 aa		4.17	□□□□□ -1.74
SMARCAD1-208	ENST00000514232		A0A1W2PP55	124 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms