RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 MCCP23508 829 aa12.1□□□□□ -0.47
NEDD9-214ENST00000513989 RNF20Q5VTR2 975 aa12.1□□□□□ -0.47
NEDD9-214ENST00000513989 TTC6Q86TZ1 520 aa12.1□□□□□ -0.47
NEDD9-214ENST00000513989 ZNF589Q86UQ0 364 aaPredicted RBP12.1□□□□□ -0.47
NEDD9-214ENST00000513989 FAM83AQ86UY5 434 aa12.1□□□□□ -0.47
NEDD9-214ENST00000513989 ZSCAN29Q8IWY8 852 aaPredicted RBP12.1□□□□□ -0.47
NEDD9-214ENST00000513989 HOOK2Q96ED9 719 aa12.1□□□□□ -0.47
NEDD9-214ENST00000513989 PCDHAC2Q9Y5I4 1007 aa12.1□□□□□ -0.47
NEDD9-214ENST00000513989 SSC5DA1L4H1 1573 aa12.09□□□□□ -0.47
NEDD9-214ENST00000513989 PRKAB2O43741 272 aa12.09□□□□□ -0.47
NEDD9-214ENST00000513989 WDHD1O75717 1129 aaPredicted RBP12.09□□□□□ -0.47
NEDD9-214ENST00000513989 TRPA1O75762 1119 aa12.09□□□□□ -0.47
NEDD9-214ENST00000513989 HLA-DOAP06340 250 aa12.09□□□□□ -0.47
NEDD9-214ENST00000513989 TCP10Q12799 353 aa12.09□□□□□ -0.47
NEDD9-214ENST00000513989 PICALMQ13492 652 aa12.09□□□□□ -0.47
NEDD9-214ENST00000513989 MAPKAPK5Q8IW41 473 aa12.09□□□□□ -0.47
NEDD9-214ENST00000513989 IFNL3Q8IZI9 196 aa12.09□□□□□ -0.47
NEDD9-214ENST00000513989 FAM151AQ8WW52 585 aa12.09□□□□□ -0.47
NEDD9-214ENST00000513989 DCP1AQ9NPI6 582 aaPredicted RBP12.09□□□□□ -0.47
NEDD9-214ENST00000513989 MCM9Q9NXL9 1143 aa12.09□□□□□ -0.47
NEDD9-214ENST00000513989 PPP2R3BQ9Y5P8 575 aa12.09□□□□□ -0.47
NEDD9-214ENST00000513989 MYH13Q9UKX3 1938 aa12.09□□□□□ -0.47
NEDD9-214ENST00000513989 BRCA2P51587 3418 aa12.09□□□□□ -0.47
NEDD9-214ENST00000513989 GSG1L2A8MUP6 293 aa12.08□□□□□ -0.48
NEDD9-214ENST00000513989 ZNF213O14771 459 aa12.08□□□□□ -0.48
NEDD9-214ENST00000513989 FGAP02671 866 aa12.08□□□□□ -0.48
NEDD9-214ENST00000513989 FKBP1BP68106 108 aa12.08□□□□□ -0.48
NEDD9-214ENST00000513989 DGKZQ13574 1117 aa12.08□□□□□ -0.48
NEDD9-214ENST00000513989 RASA3Q14644 834 aa12.08□□□□□ -0.48
NEDD9-214ENST00000513989 IMMTQ16891 758 aaKnown RBP12.08□□□□□ -0.48
NEDD9-214ENST00000513989 SUPT20HL1Q3ZLR7 823 aa12.08□□□□□ -0.48
NEDD9-214ENST00000513989 C8orf34Q49A92 452 aa12.08□□□□□ -0.48
NEDD9-214ENST00000513989 FOXP4Q8IVH2 680 aaPredicted RBP12.08□□□□□ -0.48
NEDD9-214ENST00000513989 SDR42E1Q8WUS8 393 aa12.08□□□□□ -0.48
NEDD9-214ENST00000513989 MAP4K1Q92918 833 aa12.08□□□□□ -0.48
NEDD9-214ENST00000513989 TRIM34Q9BYJ4 488 aa12.08□□□□□ -0.48
NEDD9-214ENST00000513989 DEFB129Q9H1M3 183 aa12.08□□□□□ -0.48
NEDD9-214ENST00000513989 ZNF287Q9HBT7 754 aa12.08□□□□□ -0.48
NEDD9-214ENST00000513989 PI4KBQ9UBF8 816 aa12.08□□□□□ -0.48
NEDD9-214ENST00000513989 TAOK2Q9UL54 1235 aa12.08□□□□□ -0.48
NEDD9-214ENST00000513989 FLT1P17948 1338 aa12.08□□□□□ -0.48
NEDD9-214ENST00000513989 MINDY4BA8MYZ0 360 aa12.07□□□□□ -0.48
NEDD9-214ENST00000513989 USP17L12C9JPN9 530 aa12.07□□□□□ -0.48
NEDD9-214ENST00000513989 USP17L21D6R901 530 aa12.07□□□□□ -0.48
NEDD9-214ENST00000513989 UBE2Q2LH0YL09 131 aa12.07□□□□□ -0.48
NEDD9-214ENST00000513989 ZKSCAN1P17029 563 aaPredicted RBP12.07□□□□□ -0.48
NEDD9-214ENST00000513989 CACNB3P54284 484 aa12.07□□□□□ -0.48
NEDD9-214ENST00000513989 NFIAQ12857 509 aa12.07□□□□□ -0.48
NEDD9-214ENST00000513989 SBK1Q52WX2 424 aa12.07□□□□□ -0.48
NEDD9-214ENST00000513989 VPS53Q5VIR6 699 aa12.07□□□□□ -0.48
NEDD9-214ENST00000513989 BACH2Q9BYV9 841 aa12.07□□□□□ -0.48
NEDD9-214ENST00000513989 LSG1Q9H089 658 aaKnown RBP12.07□□□□□ -0.48
NEDD9-214ENST00000513989 OSBPL5Q9H0X9 879 aaPredicted RBP12.07□□□□□ -0.48
NEDD9-214ENST00000513989 ARPP21Q9UBL0 812 aaPredicted RBP12.07□□□□□ -0.48
NEDD9-214ENST00000513989 FAM198AQ9UFP1 575 aa12.07□□□□□ -0.48
NEDD9-214ENST00000513989 MKI67P46013 3256 aaKnown RBP12.06□□□□□ -0.48
NEDD9-214ENST00000513989 NF2P35240 595 aa12.06□□□□□ -0.48
NEDD9-214ENST00000513989 PTH1RQ03431 593 aa12.06□□□□□ -0.48
NEDD9-214ENST00000513989 PDE4BQ07343 736 aa12.06□□□□□ -0.48
NEDD9-214ENST00000513989 CTR9Q6PD62 1173 aa12.06□□□□□ -0.48
NEDD9-214ENST00000513989 CRACR2BQ8N4Y2 399 aaPredicted RBP12.06□□□□□ -0.48
NEDD9-214ENST00000513989 USP26Q9BXU7 913 aa12.06□□□□□ -0.48
NEDD9-214ENST00000513989 RNF41Q9H4P4 317 aaPredicted RBP12.06□□□□□ -0.48
NEDD9-214ENST00000513989 SAP30BPQ9UHR5 308 aaKnown RBP12.06□□□□□ -0.48
NEDD9-214ENST00000513989 FZD1Q9UP38 647 aa12.06□□□□□ -0.48
NEDD9-214ENST00000513989 ZMYM6O95789 1325 aa12.06□□□□□ -0.48
NEDD9-214ENST00000513989 PCP11498 1178 aaKnown RBP12.05□□□□□ -0.48
NEDD9-214ENST00000513989 KCNA4P22459 653 aa12.05□□□□□ -0.48
NEDD9-214ENST00000513989 C12orf60Q5U649 245 aa12.05□□□□□ -0.48
NEDD9-214ENST00000513989 DCAF15Q66K64 600 aa12.05□□□□□ -0.48
NEDD9-214ENST00000513989 DDX4Q9NQI0 724 aaKnown RBP12.05□□□□□ -0.48
NEDD9-214ENST00000513989 PALD1Q9ULE6 856 aa12.05□□□□□ -0.48
NEDD9-214ENST00000513989 RBM8AQ9Y5S9 174 aaKnown RBP12.05□□□□□ -0.48
NEDD9-214ENST00000513989 PPP1R12BO60237 982 aaPredicted RBP12.04□□□□□ -0.48
NEDD9-214ENST00000513989 NT5C2P49902 561 aa12.04□□□□□ -0.48
NEDD9-214ENST00000513989 PPARAQ07869 468 aa12.04□□□□□ -0.48
NEDD9-214ENST00000513989 TRDNQ13061 729 aa12.04□□□□□ -0.48
NEDD9-214ENST00000513989 KRT32Q14532 448 aa12.04□□□□□ -0.48
NEDD9-214ENST00000513989 MFSD6Q6ZSS7 791 aa12.04□□□□□ -0.48
NEDD9-214ENST00000513989 ZFPM1Q8IX07 1006 aa12.04□□□□□ -0.48
NEDD9-214ENST00000513989 TMEM39BQ9GZU3 492 aa12.04□□□□□ -0.48
NEDD9-214ENST00000513989 IL25Q9H293 177 aa12.04□□□□□ -0.48
NEDD9-214ENST00000513989 MKNK2Q9HBH9 465 aa12.04□□□□□ -0.48
NEDD9-214ENST00000513989 SWAP70Q9UH65 585 aa12.04□□□□□ -0.48
NEDD9-214ENST00000513989 HERC5Q9UII4 1024 aaKnown RBP12.04□□□□□ -0.48
NEDD9-214ENST00000513989 SERPINB13Q9UIV8 391 aa12.04□□□□□ -0.48
NEDD9-214ENST00000513989 KIAA0100Q14667 2235 aaKnown RBP12.03□□□□□ -0.48
NEDD9-214ENST00000513989 TBC1D12O60347 775 aa12.03□□□□□ -0.48
NEDD9-214ENST00000513989 TM4SF4P48230 202 aa12.03□□□□□ -0.48
NEDD9-214ENST00000513989 MLLT1Q03111 559 aaPredicted RBP12.03□□□□□ -0.48
NEDD9-214ENST00000513989 NECTIN1Q15223 517 aa12.03□□□□□ -0.48
NEDD9-214ENST00000513989 LDLRAD1Q5T700 205 aa12.03□□□□□ -0.48
NEDD9-214ENST00000513989 CREB3L3Q68CJ9 461 aa12.03□□□□□ -0.48
NEDD9-214ENST00000513989 ZNF444Q8N0Y2 327 aaPredicted RBP12.03□□□□□ -0.48
NEDD9-214ENST00000513989 EHD4Q9H223 541 aa12.03□□□□□ -0.48
NEDD9-214ENST00000513989 R3HDMLQ9H3Y0 253 aa12.03□□□□□ -0.48
NEDD9-214ENST00000513989 CNNM2Q9H8M5 875 aa12.03□□□□□ -0.48
NEDD9-214ENST00000513989 EPB41L4AQ9HCS5 686 aaPredicted RBP12.03□□□□□ -0.48
NEDD9-214ENST00000513989 ANAPC4Q9UJX5 808 aa12.03□□□□□ -0.48
NEDD9-214ENST00000513989 DDTLA6NHG4 134 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms