RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 MCAMP43121 646 aa10.99□□□□□ -0.65
VCAN-210ENST00000513960 ANO1Q5XXA6 986 aa10.99□□□□□ -0.65
VCAN-210ENST00000513960 FOXR1Q6PIV2 292 aa10.99□□□□□ -0.65
VCAN-210ENST00000513960 HDXQ7Z353 690 aa10.99□□□□□ -0.65
VCAN-210ENST00000513960 ENGASEQ8NFI3 743 aa10.99□□□□□ -0.65
VCAN-210ENST00000513960 NUP188Q5SRE5 1749 aa10.99□□□□□ -0.65
VCAN-210ENST00000513960 UBR2Q8IWV8 1755 aa10.99□□□□□ -0.65
VCAN-210ENST00000513960 PDE8AO60658 829 aa10.99□□□□□ -0.65
VCAN-210ENST00000513960 MYSM1Q5VVJ2 828 aa10.99□□□□□ -0.65
VCAN-210ENST00000513960 CPLX2Q6PUV4 134 aaKnown RBP10.99□□□□□ -0.65
VCAN-210ENST00000513960 DZIP3Q86Y13 1208 aaKnown RBP10.99□□□□□ -0.65
VCAN-210ENST00000513960 JMYQ8N9B5 988 aa10.99□□□□□ -0.65
VCAN-210ENST00000513960 LINC00301Q8NCQ3 95 aa10.99□□□□□ -0.65
VCAN-210ENST00000513960 ZBTB1Q9Y2K1 713 aa10.99□□□□□ -0.65
VCAN-210ENST00000513960 CCDC175P0C221 793 aa10.99□□□□□ -0.65
VCAN-210ENST00000513960 MTF1Q14872 753 aa10.99□□□□□ -0.65
VCAN-210ENST00000513960 CCDC93Q567U6 631 aa10.99□□□□□ -0.65
VCAN-210ENST00000513960 AEBP2Q6ZN18 517 aaPredicted RBP10.99□□□□□ -0.65
VCAN-210ENST00000513960 FBXL16Q8N461 479 aa10.99□□□□□ -0.65
VCAN-210ENST00000513960 RGS22Q8NE09 1264 aa10.99□□□□□ -0.65
VCAN-210ENST00000513960 CAGE1Q8TC20 777 aa10.99□□□□□ -0.65
VCAN-210ENST00000513960 TJP1Q07157 1748 aa10.98□□□□□ -0.65
VCAN-210ENST00000513960 GOLGA6L9A6NEM1 432 aa10.98□□□□□ -0.65
VCAN-210ENST00000513960 H0YHG0 523 aa10.98□□□□□ -0.65
VCAN-210ENST00000513960 PDE8BO95263 885 aa10.98□□□□□ -0.65
VCAN-210ENST00000513960 UQCRFS1P1P0C7P4 283 aa10.98□□□□□ -0.65
VCAN-210ENST00000513960 CYP19A1P11511 503 aaPredicted RBP10.98□□□□□ -0.65
VCAN-210ENST00000513960 TXLNAP40222 546 aa10.98□□□□□ -0.65
VCAN-210ENST00000513960 CCDC102BQ68D86 513 aa10.98□□□□□ -0.65
VCAN-210ENST00000513960 MB21D2Q8IYB1 491 aaPredicted RBP10.98□□□□□ -0.65
VCAN-210ENST00000513960 NFE2L3Q9Y4A8 694 aa10.98□□□□□ -0.65
VCAN-210ENST00000513960 SALL1Q9NSC2 1324 aa10.98□□□□□ -0.65
VCAN-210ENST00000513960 VWA3AA6NCI4 1184 aa10.98□□□□□ -0.65
VCAN-210ENST00000513960 ADD2P35612 726 aa10.98□□□□□ -0.65
VCAN-210ENST00000513960 MICU3Q86XE3 530 aa10.98□□□□□ -0.65
VCAN-210ENST00000513960 DHX37Q8IY37 1157 aaKnown RBP10.98□□□□□ -0.65
VCAN-210ENST00000513960 SMARCC1Q92922 1105 aaPredicted RBP10.98□□□□□ -0.65
VCAN-210ENST00000513960 EXOC4Q96A65 974 aa10.98□□□□□ -0.65
VCAN-210ENST00000513960 AIDAQ96BJ3 306 aa10.98□□□□□ -0.65
VCAN-210ENST00000513960 SPEF2Q9C093 1822 aa10.98□□□□□ -0.65
VCAN-210ENST00000513960 TFRCP02786 760 aaKnown RBP10.98□□□□□ -0.65
VCAN-210ENST00000513960 FDPSP14324 419 aaKnown RBP10.98□□□□□ -0.65
VCAN-210ENST00000513960 RABGGTAQ92696 567 aa10.98□□□□□ -0.65
VCAN-210ENST00000513960 AIFM3Q96NN9 605 aa10.98□□□□□ -0.65
VCAN-210ENST00000513960 LOC102724159A0A0B4J2E5 919 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 MNAT1P51948 309 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 PWP2Q15269 919 aaKnown RBP10.97□□□□□ -0.65
VCAN-210ENST00000513960 DNAJC21Q5F1R6 531 aaKnown RBP10.97□□□□□ -0.65
VCAN-210ENST00000513960 REXO1L1PQ8IX06 675 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 ABCB6Q9NP58 842 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 JRKLQ9Y4A0 524 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 CTAGE15A4D2H0 777 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 SOWAHDA6NJG2 315 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 CTAGE8P0CG41 777 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 TRIM65Q6PJ69 517 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 CTAGE6Q86UF2 777 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 CTAGE4Q8IX94 777 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 HELBQ8NG08 1087 aaPredicted RBP10.97□□□□□ -0.65
VCAN-210ENST00000513960 ALG1Q9BT22 464 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 COBLO75128 1261 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 PPARDQ03181 441 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 UBE3CQ15386 1083 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 ICE2Q659A1 982 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 VSTM4Q8IW00 320 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 CAPZA3Q96KX2 299 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 EFCC1Q9HA90 598 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 RTEL1Q9NZ71 1219 aa10.97□□□□□ -0.65
VCAN-210ENST00000513960 FOXP2O15409 715 aa10.96□□□□□ -0.65
VCAN-210ENST00000513960 CDKL5O76039 1030 aa10.96□□□□□ -0.65
VCAN-210ENST00000513960 PHKA1P46020 1223 aa10.96□□□□□ -0.65
VCAN-210ENST00000513960 FKBP15Q5T1M5 1219 aa10.96□□□□□ -0.65
VCAN-210ENST00000513960 BRAPQ7Z569 592 aa10.96□□□□□ -0.65
VCAN-210ENST00000513960 FUT8Q9BYC5 575 aa10.96□□□□□ -0.65
VCAN-210ENST00000513960 FAM53CQ9NYF3 392 aa10.96□□□□□ -0.65
VCAN-210ENST00000513960 ANGEL1Q9UNK9 670 aaKnown RBP10.96□□□□□ -0.65
VCAN-210ENST00000513960 ZNF532Q9HCE3 1301 aa10.96□□□□□ -0.65
VCAN-210ENST00000513960 METAP2P50579 478 aaKnown RBP eCLIP10.96□□□□□ -0.65
VCAN-210ENST00000513960 PUM3Q15397 648 aaKnown RBP10.96□□□□□ -0.65
VCAN-210ENST00000513960 MUM1L1Q5H9M0 696 aa10.96□□□□□ -0.65
VCAN-210ENST00000513960 LPIN2Q92539 896 aa10.96□□□□□ -0.65
VCAN-210ENST00000513960 ZNF512BQ96KM6 892 aaPredicted RBP10.96□□□□□ -0.65
VCAN-210ENST00000513960 EIF3CLB5ME19 914 aaKnown RBP10.96□□□□□ -0.66
VCAN-210ENST00000513960 ERVV-1B6SEH8 477 aa10.96□□□□□ -0.66
VCAN-210ENST00000513960 SLC5A1P13866 664 aa10.96□□□□□ -0.66
VCAN-210ENST00000513960 IL6STP40189 918 aaPredicted RBP10.96□□□□□ -0.66
VCAN-210ENST00000513960 AFMP43652 599 aa10.96□□□□□ -0.66
VCAN-210ENST00000513960 ANTXR2P58335 489 aa10.96□□□□□ -0.66
VCAN-210ENST00000513960 SLC20A2Q08357 652 aa10.96□□□□□ -0.66
VCAN-210ENST00000513960 PHKBQ93100 1093 aa10.96□□□□□ -0.66
VCAN-210ENST00000513960 EIF3CQ99613 913 aaKnown RBP10.96□□□□□ -0.66
VCAN-210ENST00000513960 FAM204AQ9H8W3 233 aa10.96□□□□□ -0.66
VCAN-210ENST00000513960 PIH1D3Q9NQM4 214 aaKnown RBP10.96□□□□□ -0.66
VCAN-210ENST00000513960 PCDHA5Q9Y5H7 936 aa10.96□□□□□ -0.66
VCAN-210ENST00000513960 MRFAP1Q9Y605 127 aa10.96□□□□□ -0.66
VCAN-210ENST00000513960 CTAGE9A4FU28 777 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 ATP8B1O43520 1251 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 PDE6AP16499 860 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 MAP3K12Q12852 859 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 CTR9Q6PD62 1173 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 GRAMD1CQ8IYS0 662 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms