RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 TGFB1P01137 390 aa6.68□□□□□ -1.34
CLDND1-228ENST00000513873 IGLV1-40P01703 118 aa6.68□□□□□ -1.34
CLDND1-228ENST00000513873 C8AP07357 584 aa6.68□□□□□ -1.34
CLDND1-228ENST00000513873 ST13P50502 369 aaKnown RBP6.68□□□□□ -1.34
CLDND1-228ENST00000513873 SOX4Q06945 474 aaPredicted RBP6.68□□□□□ -1.34
CLDND1-228ENST00000513873 MAP1SQ66K74 1059 aaPredicted RBP6.68□□□□□ -1.34
CLDND1-228ENST00000513873 LLGL2Q6P1M3 1020 aa6.68□□□□□ -1.34
CLDND1-228ENST00000513873 DYMQ7RTS9 669 aa6.68□□□□□ -1.34
CLDND1-228ENST00000513873 UBL7Q96S82 380 aaPredicted RBP6.68□□□□□ -1.34
CLDND1-228ENST00000513873 KRTAP4-5Q9BYR2 181 aa6.68□□□□□ -1.34
CLDND1-228ENST00000513873 NRSN2Q9GZP1 204 aa6.68□□□□□ -1.34
CLDND1-228ENST00000513873 AP4E1Q9UPM8 1137 aa6.68□□□□□ -1.34
CLDND1-228ENST00000513873 ZCCHC11Q5TAX3 1644 aaKnown RBP6.68□□□□□ -1.34
CLDND1-228ENST00000513873 RIMS1Q86UR5 1692 aaKnown RBP6.68□□□□□ -1.34
CLDND1-228ENST00000513873 CLIP1P30622 1438 aa6.67□□□□□ -1.34
CLDND1-228ENST00000513873 CD109Q6YHK3 1445 aa6.67□□□□□ -1.34
CLDND1-228ENST00000513873 RBM47A0AV96 593 aaKnown RBP6.67□□□□□ -1.34
CLDND1-228ENST00000513873 AOC2O75106 756 aa6.67□□□□□ -1.34
CLDND1-228ENST00000513873 DLGAP3O95886 979 aa6.67□□□□□ -1.34
CLDND1-228ENST00000513873 BMP3P12645 472 aa6.67□□□□□ -1.34
CLDND1-228ENST00000513873 LIG1P18858 919 aa6.67□□□□□ -1.34
CLDND1-228ENST00000513873 MEI1Q5TIA1 1274 aa6.67□□□□□ -1.34
CLDND1-228ENST00000513873 PCNX4Q63HM2 1172 aa6.67□□□□□ -1.34
CLDND1-228ENST00000513873 TTBK2Q6IQ55 1244 aa6.67□□□□□ -1.34
CLDND1-228ENST00000513873 FAM46AQ96IP4 442 aaKnown RBP6.67□□□□□ -1.34
CLDND1-228ENST00000513873 CCDC86Q9H6F5 360 aaKnown RBP6.67□□□□□ -1.34
CLDND1-228ENST00000513873 STOML1Q9UBI4 398 aa6.67□□□□□ -1.34
CLDND1-228ENST00000513873 HIF3AQ9Y2N7 669 aa6.67□□□□□ -1.34
CLDND1-228ENST00000513873 SETD1BQ9UPS6 1966 aaKnown RBP6.66□□□□□ -1.34
CLDND1-228ENST00000513873 ECEL1O95672 775 aa6.66□□□□□ -1.34
CLDND1-228ENST00000513873 CELA3AP09093 270 aa6.66□□□□□ -1.34
CLDND1-228ENST00000513873 DRD2P14416 443 aa6.66□□□□□ -1.34
CLDND1-228ENST00000513873 MAP3K11Q16584 847 aa6.66□□□□□ -1.34
CLDND1-228ENST00000513873 SCARA3Q6AZY7 606 aa6.66□□□□□ -1.34
CLDND1-228ENST00000513873 RELL1Q8IUW5 271 aa6.66□□□□□ -1.34
CLDND1-228ENST00000513873 MYRFLQ96LU7 910 aa6.66□□□□□ -1.34
CLDND1-228ENST00000513873 NOC4LQ9BVI4 516 aaKnown RBP6.66□□□□□ -1.34
CLDND1-228ENST00000513873 PICK1Q9NRD5 415 aa6.66□□□□□ -1.34
CLDND1-228ENST00000513873 RAXQ9Y2V3 346 aa6.66□□□□□ -1.34
CLDND1-228ENST00000513873 STRCQ7RTU9 1775 aa6.66□□□□□ -1.34
CLDND1-228ENST00000513873 YEATS2Q9ULM3 1422 aa6.66□□□□□ -1.34
CLDND1-228ENST00000513873 WDR7Q9Y4E6 1490 aa6.66□□□□□ -1.34
CLDND1-228ENST00000513873 PAGE1O75459 146 aa6.65□□□□□ -1.34
CLDND1-228ENST00000513873 TRIM37O94972 964 aa6.65□□□□□ -1.34
CLDND1-228ENST00000513873 CTSBP07858 339 aa6.65□□□□□ -1.34
CLDND1-228ENST00000513873 ADH5P11766 374 aa6.65□□□□□ -1.34
CLDND1-228ENST00000513873 BMP6P22004 513 aa6.65□□□□□ -1.34
CLDND1-228ENST00000513873 ASPAP45381 313 aa6.65□□□□□ -1.34
CLDND1-228ENST00000513873 PREPP48147 710 aa6.65□□□□□ -1.34
CLDND1-228ENST00000513873 PWP1Q13610 501 aa6.65□□□□□ -1.34
CLDND1-228ENST00000513873 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.65□□□□□ -1.34
CLDND1-228ENST00000513873 ASIC4Q96FT7 647 aa6.65□□□□□ -1.34
CLDND1-228ENST00000513873 WDR18Q9BV38 432 aa6.65□□□□□ -1.34
CLDND1-228ENST00000513873 ATXN3LQ9H3M9 355 aa6.65□□□□□ -1.34
CLDND1-228ENST00000513873 PIDD1Q9HB75 910 aa6.65□□□□□ -1.34
CLDND1-228ENST00000513873 TTBK1Q5TCY1 1321 aaPredicted RBP6.65□□□□□ -1.35
CLDND1-228ENST00000513873 SYNGAP1Q96PV0 1343 aa6.65□□□□□ -1.35
CLDND1-228ENST00000513873 USP31Q70CQ4 1352 aa6.65□□□□□ -1.35
CLDND1-228ENST00000513873 PHLDB1Q86UU1 1377 aa6.65□□□□□ -1.35
CLDND1-228ENST00000513873 TIAF1O95411 115 aa6.64□□□□□ -1.35
CLDND1-228ENST00000513873 RPS26P62854 115 aaKnown RBP6.64□□□□□ -1.35
CLDND1-228ENST00000513873 ID3Q02535 119 aa6.64□□□□□ -1.35
CLDND1-228ENST00000513873 KIF4BQ2VIQ3 1234 aa6.64□□□□□ -1.35
CLDND1-228ENST00000513873 PAOXQ6QHF9 649 aa6.64□□□□□ -1.35
CLDND1-228ENST00000513873 BEND4Q6ZU67 534 aa6.64□□□□□ -1.35
CLDND1-228ENST00000513873 PDZD3Q86UT5 571 aa6.64□□□□□ -1.35
CLDND1-228ENST00000513873 CLEC10AQ8IUN9 316 aa6.64□□□□□ -1.35
CLDND1-228ENST00000513873 FAM20CQ8IXL6 584 aa6.64□□□□□ -1.35
CLDND1-228ENST00000513873 POU5F2Q8N7G0 328 aa6.64□□□□□ -1.35
CLDND1-228ENST00000513873 TMEM87AQ8NBN3 555 aa6.64□□□□□ -1.35
CLDND1-228ENST00000513873 RGS22Q8NE09 1264 aa6.64□□□□□ -1.35
CLDND1-228ENST00000513873 SSU72Q9NP77 194 aaKnown RBP6.64□□□□□ -1.35
CLDND1-228ENST00000513873 ADGRE2Q9UHX3 823 aa6.64□□□□□ -1.35
CLDND1-228ENST00000513873 ARID4BQ4LE39 1312 aaPredicted RBP6.64□□□□□ -1.35
CLDND1-228ENST00000513873 CTSHP09668 335 aa6.63□□□□□ -1.35
CLDND1-228ENST00000513873 SPINK2P20155 84 aa6.63□□□□□ -1.35
CLDND1-228ENST00000513873 MAP4P27816 1152 aaKnown RBP6.63□□□□□ -1.35
CLDND1-228ENST00000513873 ZNF252P-AS1Q0IIN9 211 aa6.63□□□□□ -1.35
CLDND1-228ENST00000513873 NFKBIBQ15653 356 aa6.63□□□□□ -1.35
CLDND1-228ENST00000513873 GIMAP7Q8NHV1 300 aa6.63□□□□□ -1.35
CLDND1-228ENST00000513873 GRIN3AQ8TCU5 1115 aa6.63□□□□□ -1.35
CLDND1-228ENST00000513873 PREX1Q8TCU6 1659 aa6.63□□□□□ -1.35
CLDND1-228ENST00000513873 STK35Q8TDR2 534 aa6.63□□□□□ -1.35
CLDND1-228ENST00000513873 GPBAR1Q8TDU6 330 aa6.63□□□□□ -1.35
CLDND1-228ENST00000513873 PCDHA4Q9UN74 947 aa6.63□□□□□ -1.35
CLDND1-228ENST00000513873 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.62□□□□□ -1.35
CLDND1-228ENST00000513873 FAM95CA0A1B0GW59 222 aa6.62□□□□□ -1.35
CLDND1-228ENST00000513873 ZNF862O60290 1169 aa6.62□□□□□ -1.35
CLDND1-228ENST00000513873 RNGTTO60942 597 aaKnown RBP6.62□□□□□ -1.35
CLDND1-228ENST00000513873 RAB6AP20340 208 aa6.62□□□□□ -1.35
CLDND1-228ENST00000513873 RANGAP1P46060 587 aaPredicted RBP6.62□□□□□ -1.35
CLDND1-228ENST00000513873 LIG3P49916 1009 aa6.62□□□□□ -1.35
CLDND1-228ENST00000513873 MAP7Q14244 749 aa6.62□□□□□ -1.35
CLDND1-228ENST00000513873 DTX1Q86Y01 620 aa6.62□□□□□ -1.35
CLDND1-228ENST00000513873 ARMC10Q8N2F6 343 aa6.62□□□□□ -1.35
CLDND1-228ENST00000513873 C2CD4AQ8NCU7 369 aaPredicted RBP6.62□□□□□ -1.35
CLDND1-228ENST00000513873 ELMO3Q96BJ8 720 aa6.62□□□□□ -1.35
CLDND1-228ENST00000513873 WDR89Q96FK6 387 aaPredicted RBP6.62□□□□□ -1.35
CLDND1-228ENST00000513873 MIR1-1HGQ9H1L0 117 aa6.62□□□□□ -1.35
CLDND1-228ENST00000513873 ACTL7BQ9Y614 415 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms