RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 ZNF34Q8IZ26 560 aa9.3□□□□□ -0.92
DDR1-273ENST00000513514 KRI1Q8N9T8 703 aaKnown RBP9.3□□□□□ -0.92
DDR1-273ENST00000513514 IGDCC4Q8TDY8 1250 aa9.3□□□□□ -0.92
DDR1-273ENST00000513514 ALG1Q9BT22 464 aa9.3□□□□□ -0.92
DDR1-273ENST00000513514 PUS7LQ9H0K6 701 aaKnown RBP9.3□□□□□ -0.92
DDR1-273ENST00000513514 L2HGDHQ9H9P8 463 aa9.3□□□□□ -0.92
DDR1-273ENST00000513514 SLC12A7Q9Y666 1083 aa9.3□□□□□ -0.92
DDR1-273ENST00000513514 RIC1Q4ADV7 1423 aa9.3□□□□□ -0.92
DDR1-273ENST00000513514 PHLPP2Q6ZVD8 1323 aa9.3□□□□□ -0.92
DDR1-273ENST00000513514 TIAM2Q8IVF5 1701 aa9.29□□□□□ -0.92
DDR1-273ENST00000513514 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.29□□□□□ -0.92
DDR1-273ENST00000513514 TCRBV5S4A2TA0A5A2 114 aa9.29□□□□□ -0.92
DDR1-273ENST00000513514 SLU7O95391 586 aaKnown RBP9.29□□□□□ -0.92
DDR1-273ENST00000513514 CYP19A1P11511 503 aaPredicted RBP9.29□□□□□ -0.92
DDR1-273ENST00000513514 PFKFB1P16118 471 aa9.29□□□□□ -0.92
DDR1-273ENST00000513514 PDE6AP16499 860 aa9.29□□□□□ -0.92
DDR1-273ENST00000513514 ERCC5P28715 1186 aaPredicted RBP9.29□□□□□ -0.92
DDR1-273ENST00000513514 MCAMP43121 646 aa9.29□□□□□ -0.92
DDR1-273ENST00000513514 ANTXR2P58335 489 aa9.29□□□□□ -0.92
DDR1-273ENST00000513514 CCZ1BP86790 482 aa9.29□□□□□ -0.92
DDR1-273ENST00000513514 CCZ1P86791 482 aaPredicted RBP9.29□□□□□ -0.92
DDR1-273ENST00000513514 GABPB1Q06547 395 aaPredicted RBP9.29□□□□□ -0.92
DDR1-273ENST00000513514 CCDC152Q4G0S7 254 aa9.29□□□□□ -0.92
DDR1-273ENST00000513514 AKNAD1Q5T1N1 836 aa9.29□□□□□ -0.92
DDR1-273ENST00000513514 TAF3Q5VWG9 929 aa9.29□□□□□ -0.92
DDR1-273ENST00000513514 KRT40Q6A162 431 aa9.29□□□□□ -0.92
DDR1-273ENST00000513514 C11orf57Q6ZUT1 292 aaPredicted RBP9.29□□□□□ -0.92
DDR1-273ENST00000513514 VPS37DQ86XT2 251 aa9.29□□□□□ -0.92
DDR1-273ENST00000513514 AOPEPQ8N6M6 819 aa9.29□□□□□ -0.92
DDR1-273ENST00000513514 ZNF397Q8NF99 534 aaPredicted RBP9.29□□□□□ -0.92
DDR1-273ENST00000513514 CTAGE1Q96RT6 745 aa9.29□□□□□ -0.92
DDR1-273ENST00000513514 NAA15Q9BXJ9 866 aaKnown RBP9.29□□□□□ -0.92
DDR1-273ENST00000513514 LRRC2Q9BYS8 371 aa9.29□□□□□ -0.92
DDR1-273ENST00000513514 PUS3Q9BZE2 481 aaKnown RBP9.29□□□□□ -0.92
DDR1-273ENST00000513514 NAPBQ9H115 298 aa9.29□□□□□ -0.92
DDR1-273ENST00000513514 NCOA5Q9HCD5 579 aaKnown RBP9.29□□□□□ -0.92
DDR1-273ENST00000513514 GNL3LQ9NVN8 582 aaKnown RBP9.29□□□□□ -0.92
DDR1-273ENST00000513514 RBM28Q9NW13 759 aaKnown RBP9.29□□□□□ -0.92
DDR1-273ENST00000513514 NAP1L2Q9ULW6 460 aaPredicted RBP9.29□□□□□ -0.92
DDR1-273ENST00000513514 MYH3P11055 1940 aa9.29□□□□□ -0.92
DDR1-273ENST00000513514 A0A1B0GVL5 298 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 GOLGA8AA7E2F4 631 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 ARHGAP6O43182 974 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 STX10O60499 249 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 SMC2O95347 1197 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 TUBBP07437 444 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 PTPREP23469 700 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 TRAPPC10P48553 1259 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 COL9A3Q14050 684 aaPredicted RBP9.28□□□□□ -0.92
DDR1-273ENST00000513514 PTPAQ15257 358 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 NTRK3Q16288 839 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 TMEM67Q5HYA8 995 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 CLEC4GQ6UXB4 293 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 MFSD6Q6ZSS7 791 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 NOSTRINQ8IVI9 506 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 ZNF710Q8N1W2 664 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 SPATA5Q8NB90 893 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 ENOX1Q8TC92 643 aaKnown RBP9.28□□□□□ -0.92
DDR1-273ENST00000513514 PIGBQ92521 554 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 FERMT2Q96AC1 680 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 FAM89AQ96GI7 184 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 ZNF594Q96JF6 807 aaPredicted RBP9.28□□□□□ -0.92
DDR1-273ENST00000513514 MPHOSPH8Q99549 860 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 MAP3K14Q99558 947 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.28□□□□□ -0.92
DDR1-273ENST00000513514 RNF26Q9BY78 433 aaPredicted RBP9.28□□□□□ -0.92
DDR1-273ENST00000513514 TMX1Q9H3N1 280 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 TRMT112Q9UI30 125 aaKnown RBP9.28□□□□□ -0.92
DDR1-273ENST00000513514 BCS1LQ9Y276 419 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 CLIC4Q9Y696 253 aa9.28□□□□□ -0.92
DDR1-273ENST00000513514 MMP1P03956 469 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 ADORA1P30542 326 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 IGHMBP2P38935 993 aaKnown RBP9.27□□□□□ -0.93
DDR1-273ENST00000513514 FANCCQ00597 558 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 CEBPZQ03701 1054 aaKnown RBP9.27□□□□□ -0.93
DDR1-273ENST00000513514 CCDC178Q5BJE1 867 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 TTLL5Q6EMB2 1281 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 NFXL1Q6ZNB6 911 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 KRBA2Q6ZNG9 492 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 CERS3Q8IU89 383 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 IFNL3Q8IZI9 196 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 LINC00116Q8NCU8 138 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 CNNM3Q8NE01 707 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 RBM46Q8TBY0 533 aaKnown RBP9.27□□□□□ -0.93
DDR1-273ENST00000513514 JARID2Q92833 1246 aaPredicted RBP9.27□□□□□ -0.93
DDR1-273ENST00000513514 C16orf45Q96MC5 204 aaPredicted RBP9.27□□□□□ -0.93
DDR1-273ENST00000513514 LY9Q9HBG7 655 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 BRMS1Q9HCU9 246 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 ARGLU1Q9NWB6 273 aaPredicted RBP9.27□□□□□ -0.93
DDR1-273ENST00000513514 NRBP1Q9UHY1 535 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 KCNH3Q9ULD8 1083 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 ZNF652Q9Y2D9 606 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 SRPRBQ9Y5M8 271 aaKnown RBP9.27□□□□□ -0.93
DDR1-273ENST00000513514 NDUFB9Q9Y6M9 179 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 C10orf71Q711Q0 1435 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 C4AP0C0L4 1744 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 NEDD4P46934 1319 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 ZNF532Q9HCE3 1301 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 AKAP11Q9UKA4 1901 aa9.27□□□□□ -0.93
DDR1-273ENST00000513514 A0A0G2JLW4 131 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms