RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 PTPN11Q06124 597 aaPredicted RBP6.35□□□□□ -1.39
HTT-210ENST00000512909 PPM1JQ5JR12 505 aa6.35□□□□□ -1.39
HTT-210ENST00000512909 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.35□□□□□ -1.39
HTT-210ENST00000512909 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.35□□□□□ -1.39
HTT-210ENST00000512909 REXO1Q8N1G1 1221 aaKnown RBP6.35□□□□□ -1.39
HTT-210ENST00000512909 OR6P1Q8NGX9 317 aa6.35□□□□□ -1.39
HTT-210ENST00000512909 WDR89Q96FK6 387 aaPredicted RBP6.35□□□□□ -1.39
HTT-210ENST00000512909 NRSN2Q9GZP1 204 aa6.35□□□□□ -1.39
HTT-210ENST00000512909 KCNF1Q9H3M0 494 aa6.35□□□□□ -1.39
HTT-210ENST00000512909 KLHL3Q9UH77 587 aa6.35□□□□□ -1.39
HTT-210ENST00000512909 HIF3AQ9Y2N7 669 aa6.35□□□□□ -1.39
HTT-210ENST00000512909 TMPRSS2O15393 492 aa6.34□□□□□ -1.39
HTT-210ENST00000512909 ALX3O95076 343 aa6.34□□□□□ -1.39
HTT-210ENST00000512909 HCLS1P14317 486 aaPredicted RBP6.34□□□□□ -1.39
HTT-210ENST00000512909 GRK4P32298 578 aa6.34□□□□□ -1.39
HTT-210ENST00000512909 CRKP46108 304 aa6.34□□□□□ -1.39
HTT-210ENST00000512909 INPP5AQ14642 412 aa6.34□□□□□ -1.39
HTT-210ENST00000512909 PPP2R5EQ16537 467 aa6.34□□□□□ -1.39
HTT-210ENST00000512909 TNNI3KQ59H18 835 aa6.34□□□□□ -1.39
HTT-210ENST00000512909 ZC3H12AQ5D1E8 599 aaKnown RBP6.34□□□□□ -1.39
HTT-210ENST00000512909 CCDC81Q6ZN84 652 aa6.34□□□□□ -1.39
HTT-210ENST00000512909 HID1Q8IV36 788 aa6.34□□□□□ -1.39
HTT-210ENST00000512909 RNF214Q8ND24 703 aa6.34□□□□□ -1.39
HTT-210ENST00000512909 FAM13CQ8NE31 585 aa6.34□□□□□ -1.39
HTT-210ENST00000512909 GIMAP7Q8NHV1 300 aa6.34□□□□□ -1.39
HTT-210ENST00000512909 WFDC12Q8WWY7 111 aa6.34□□□□□ -1.39
HTT-210ENST00000512909 DHX38Q92620 1227 aaKnown RBP6.34□□□□□ -1.39
HTT-210ENST00000512909 UTP4Q969X6 686 aaKnown RBP6.34□□□□□ -1.39
HTT-210ENST00000512909 WNT10AQ9GZT5 417 aa6.34□□□□□ -1.39
HTT-210ENST00000512909 MRVI1Q9Y6F6 885 aa6.34□□□□□ -1.39
HTT-210ENST00000512909 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.33□□□□□ -1.4
HTT-210ENST00000512909 DRD2P14416 443 aa6.33□□□□□ -1.4
HTT-210ENST00000512909 SELPP16109 830 aa6.33□□□□□ -1.4
HTT-210ENST00000512909 SOX9P48436 509 aa6.33□□□□□ -1.4
HTT-210ENST00000512909 MAP7Q14244 749 aa6.33□□□□□ -1.4
HTT-210ENST00000512909 TTLL4Q14679 1199 aa6.33□□□□□ -1.4
HTT-210ENST00000512909 TXNRD3Q86VQ6 643 aa6.33□□□□□ -1.4
HTT-210ENST00000512909 SMYD4Q8IYR2 804 aaPredicted RBP6.33□□□□□ -1.4
HTT-210ENST00000512909 PHACTR4Q8IZ21 702 aa6.33□□□□□ -1.4
HTT-210ENST00000512909 PMFBP1Q8TBY8 1022 aa6.33□□□□□ -1.4
HTT-210ENST00000512909 ARMC5Q96C12 935 aa6.33□□□□□ -1.4
HTT-210ENST00000512909 FANCD2OSQ96PS1 177 aa6.33□□□□□ -1.4
HTT-210ENST00000512909 GMLQ99445 158 aa6.33□□□□□ -1.4
HTT-210ENST00000512909 CRIM1Q9NZV1 1036 aa6.33□□□□□ -1.4
HTT-210ENST00000512909 PCOLCE2Q9UKZ9 415 aa6.33□□□□□ -1.4
HTT-210ENST00000512909 PPP1R9AQ9ULJ8 1098 aa6.33□□□□□ -1.4
HTT-210ENST00000512909 PPT2Q9UMR5 302 aa6.33□□□□□ -1.4
HTT-210ENST00000512909 DAGLAQ9Y4D2 1042 aa6.33□□□□□ -1.4
HTT-210ENST00000512909 DHX15O43143 795 aaKnown RBP6.32□□□□□ -1.4
HTT-210ENST00000512909 HTR3BO95264 441 aa6.32□□□□□ -1.4
HTT-210ENST00000512909 DLGAP3O95886 979 aa6.32□□□□□ -1.4
HTT-210ENST00000512909 RAG1P15918 1043 aa6.32□□□□□ -1.4
HTT-210ENST00000512909 UVSSAQ2YD98 709 aa6.32□□□□□ -1.4
HTT-210ENST00000512909 PAOXQ6QHF9 649 aa6.32□□□□□ -1.4
HTT-210ENST00000512909 REV1Q9UBZ9 1251 aa6.32□□□□□ -1.4
HTT-210ENST00000512909 ADAM30Q9UKF2 790 aa6.32□□□□□ -1.4
HTT-210ENST00000512909 GBP1P32455 592 aa6.31□□□□□ -1.4
HTT-210ENST00000512909 CLCQ05315 142 aa6.31□□□□□ -1.4
HTT-210ENST00000512909 NFKBIBQ15653 356 aa6.31□□□□□ -1.4
HTT-210ENST00000512909 ZBTB37Q5TC79 503 aa6.31□□□□□ -1.4
HTT-210ENST00000512909 ILDR2Q71H61 639 aa6.31□□□□□ -1.4
HTT-210ENST00000512909 CYFIP1Q7L576 1253 aa6.31□□□□□ -1.4
HTT-210ENST00000512909 MCF2L2Q86YR7 1114 aa6.31□□□□□ -1.4
HTT-210ENST00000512909 DNAJC2Q99543 621 aaKnown RBP6.31□□□□□ -1.4
HTT-210ENST00000512909 GMIPQ9P107 970 aa6.31□□□□□ -1.4
HTT-210ENST00000512909 ACTL7BQ9Y614 415 aa6.31□□□□□ -1.4
HTT-210ENST00000512909 SLC12A7Q9Y666 1083 aa6.31□□□□□ -1.4
HTT-210ENST00000512909 GFRA2O00451 464 aa6.3□□□□□ -1.4
HTT-210ENST00000512909 FGRP09769 529 aa6.3□□□□□ -1.4
HTT-210ENST00000512909 BMP3P12645 472 aa6.3□□□□□ -1.4
HTT-210ENST00000512909 NOS3P29474 1203 aa6.3□□□□□ -1.4
HTT-210ENST00000512909 GATA4P43694 442 aa6.3□□□□□ -1.4
HTT-210ENST00000512909 PREPP48147 710 aa6.3□□□□□ -1.4
HTT-210ENST00000512909 CDK8P49336 464 aa6.3□□□□□ -1.4
HTT-210ENST00000512909 MBTPS1Q14703 1052 aa6.3□□□□□ -1.4
HTT-210ENST00000512909 SLC6A19Q695T7 634 aa6.3□□□□□ -1.4
HTT-210ENST00000512909 EHMT1Q9H9B1 1298 aa6.3□□□□□ -1.4
HTT-210ENST00000512909 LGR6Q9HBX8 967 aa6.3□□□□□ -1.4
HTT-210ENST00000512909 DISC1Q9NRI5 854 aa6.3□□□□□ -1.4
HTT-210ENST00000512909 CACNA2D2Q9NY47 1150 aa6.3□□□□□ -1.4
HTT-210ENST00000512909 ACTR10Q9NZ32 417 aa6.3□□□□□ -1.4
HTT-210ENST00000512909 ZNRF3Q9ULT6 936 aa6.3□□□□□ -1.4
HTT-210ENST00000512909 CORINQ9Y5Q5 1042 aa6.3□□□□□ -1.4
HTT-210ENST00000512909 FAM95CA0A1B0GW59 222 aa6.29□□□□□ -1.4
HTT-210ENST00000512909 ATE1O95260 518 aa6.29□□□□□ -1.4
HTT-210ENST00000512909 COL8A1P27658 744 aa6.29□□□□□ -1.4
HTT-210ENST00000512909 ADGRE1Q14246 886 aa6.29□□□□□ -1.4
HTT-210ENST00000512909 ARSHQ5FYA8 562 aa6.29□□□□□ -1.4
HTT-210ENST00000512909 ARHGAP27Q6ZUM4 889 aa6.29□□□□□ -1.4
HTT-210ENST00000512909 ANKS3Q6ZW76 656 aa6.29□□□□□ -1.4
HTT-210ENST00000512909 C2CD4AQ8NCU7 369 aaPredicted RBP6.29□□□□□ -1.4
HTT-210ENST00000512909 FBLIM1Q8WUP2 373 aa6.29□□□□□ -1.4
HTT-210ENST00000512909 TMEM87BQ96K49 555 aa6.29□□□□□ -1.4
HTT-210ENST00000512909 PRKAG3Q9UGI9 489 aa6.29□□□□□ -1.4
HTT-210ENST00000512909 POLR3KQ9Y2Y1 108 aaPredicted RBP6.29□□□□□ -1.4
HTT-210ENST00000512909 TM4SF5O14894 197 aa6.28□□□□□ -1.4
HTT-210ENST00000512909 TIAF1O95411 115 aa6.28□□□□□ -1.4
HTT-210ENST00000512909 MAP4P27816 1152 aaKnown RBP6.28□□□□□ -1.4
HTT-210ENST00000512909 LARP1BQ659C4 914 aaKnown RBP6.28□□□□□ -1.4
HTT-210ENST00000512909 XAGE3Q8WTP9 111 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms