RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 GALNT6Q8NCL4 622 aa9.03□□□□□ -0.96
RFC1-215ENST00000512881 C7orf43Q8WVR3 580 aa9.03□□□□□ -0.96
RFC1-215ENST00000512881 N4BP2Q86UW6 1770 aaPredicted RBP9.03□□□□□ -0.96
RFC1-215ENST00000512881 KDM2BQ8NHM5 1336 aa9.03□□□□□ -0.96
RFC1-215ENST00000512881 PHF20L1A8MW92 1017 aa9.02□□□□□ -0.97
RFC1-215ENST00000512881 NFKBIEO00221 500 aa9.02□□□□□ -0.97
RFC1-215ENST00000512881 KHNYNO15037 678 aaKnown RBP9.02□□□□□ -0.97
RFC1-215ENST00000512881 C21orf2O43822 256 aa9.02□□□□□ -0.97
RFC1-215ENST00000512881 SRGNP10124 158 aa9.02□□□□□ -0.97
RFC1-215ENST00000512881 ARAFP10398 606 aa9.02□□□□□ -0.97
RFC1-215ENST00000512881 HOXB4P17483 251 aaPredicted RBP9.02□□□□□ -0.97
RFC1-215ENST00000512881 PSMA6P60900 246 aaKnown RBP9.02□□□□□ -0.97
RFC1-215ENST00000512881 HLFQ16534 295 aa9.02□□□□□ -0.97
RFC1-215ENST00000512881 STYK1Q6J9G0 422 aa9.02□□□□□ -0.97
RFC1-215ENST00000512881 TPTE2Q6XPS3 522 aa9.02□□□□□ -0.97
RFC1-215ENST00000512881 PODNQ7Z5L7 613 aa9.02□□□□□ -0.97
RFC1-215ENST00000512881 TSEN2Q8NCE0 465 aaKnown RBP9.02□□□□□ -0.97
RFC1-215ENST00000512881 EDARADDQ8WWZ3 215 aa9.02□□□□□ -0.97
RFC1-215ENST00000512881 RRAGCQ9HB90 399 aa9.02□□□□□ -0.97
RFC1-215ENST00000512881 NIP7Q9Y221 180 aaKnown RBP eCLIP9.02□□□□□ -0.97
RFC1-215ENST00000512881 RRP7AQ9Y3A4 280 aaKnown RBP9.02□□□□□ -0.97
RFC1-215ENST00000512881 UBR2Q8IWV8 1755 aa9.01□□□□□ -0.97
RFC1-215ENST00000512881 SERTM1A2A2V5 107 aa9.01□□□□□ -0.97
RFC1-215ENST00000512881 FAM177BA6PVY3 158 aa9.01□□□□□ -0.97
RFC1-215ENST00000512881 SFI1A8K8P3 1242 aa9.01□□□□□ -0.97
RFC1-215ENST00000512881 TMPOP42166 694 aaKnown RBP9.01□□□□□ -0.97
RFC1-215ENST00000512881 HIRAP54198 1017 aaPredicted RBP9.01□□□□□ -0.97
RFC1-215ENST00000512881 C16orf71Q8IYS4 520 aaPredicted RBP9.01□□□□□ -0.97
RFC1-215ENST00000512881 MASTLQ96GX5 879 aa9.01□□□□□ -0.97
RFC1-215ENST00000512881 CALR3Q96L12 384 aaKnown RBP9.01□□□□□ -0.97
RFC1-215ENST00000512881 TSPYL4Q9UJ04 414 aa9.01□□□□□ -0.97
RFC1-215ENST00000512881 ZNF232Q9UNY5 417 aa9.01□□□□□ -0.97
RFC1-215ENST00000512881 GPC6Q9Y625 555 aaPredicted RBP9.01□□□□□ -0.97
RFC1-215ENST00000512881 MYBBP1AQ9BQG0 1328 aaKnown RBP9.01□□□□□ -0.97
RFC1-215ENST00000512881 KLRG2A4D1S0 409 aaPredicted RBP9□□□□□ -0.97
RFC1-215ENST00000512881 GLTPD2A6NH11 291 aa9□□□□□ -0.97
RFC1-215ENST00000512881 ERVV-1B6SEH8 477 aa9□□□□□ -0.97
RFC1-215ENST00000512881 EPXP11678 715 aa9□□□□□ -0.97
RFC1-215ENST00000512881 MYL6BP14649 208 aa9□□□□□ -0.97
RFC1-215ENST00000512881 TTLL7Q6ZT98 887 aa9□□□□□ -0.97
RFC1-215ENST00000512881 BEND7Q8N7W2 519 aaPredicted RBP9□□□□□ -0.97
RFC1-215ENST00000512881 PPP1R12CQ9BZL4 782 aa9□□□□□ -0.97
RFC1-215ENST00000512881 BABAM1Q9NWV8 329 aa9□□□□□ -0.97
RFC1-215ENST00000512881 KLF15Q9UIH9 416 aa9□□□□□ -0.97
RFC1-215ENST00000512881 GJA3Q9Y6H8 435 aa9□□□□□ -0.97
RFC1-215ENST00000512881 SIPA1L3O60292 1781 aaPredicted RBP8.99□□□□□ -0.97
RFC1-215ENST00000512881 NEURL1BA8MQ27 555 aa8.99□□□□□ -0.97
RFC1-215ENST00000512881 NPR1P16066 1061 aa8.99□□□□□ -0.97
RFC1-215ENST00000512881 RASA1P20936 1047 aa8.99□□□□□ -0.97
RFC1-215ENST00000512881 LMOD3Q0VAK6 560 aa8.99□□□□□ -0.97
RFC1-215ENST00000512881 SOGA3Q5TF21 947 aa8.99□□□□□ -0.97
RFC1-215ENST00000512881 PRPF40BQ6NWY9 871 aaKnown RBP8.99□□□□□ -0.97
RFC1-215ENST00000512881 KIF6Q6ZMV9 814 aa8.99□□□□□ -0.97
RFC1-215ENST00000512881 CCDC146Q8IYE0 955 aa8.99□□□□□ -0.97
RFC1-215ENST00000512881 MAP3K15Q6ZN16 1313 aa8.99□□□□□ -0.97
RFC1-215ENST00000512881 NRXN2Q9P2S2 1712 aa8.98□□□□□ -0.97
RFC1-215ENST00000512881 VEGFAP15692 232 aaPredicted RBP8.98□□□□□ -0.97
RFC1-215ENST00000512881 EIF2S2P20042 333 aaKnown RBP8.98□□□□□ -0.97
RFC1-215ENST00000512881 FSTL1Q12841 308 aa8.98□□□□□ -0.97
RFC1-215ENST00000512881 WDR43Q15061 677 aaKnown RBP eCLIP8.98□□□□□ -0.97
RFC1-215ENST00000512881 CRTC2Q53ET0 693 aaPredicted RBP8.98□□□□□ -0.97
RFC1-215ENST00000512881 LRRC69Q6ZNQ3 347 aa8.98□□□□□ -0.97
RFC1-215ENST00000512881 FCHSD1Q86WN1 690 aa8.98□□□□□ -0.97
RFC1-215ENST00000512881 RHPN1Q8TCX5 695 aa8.98□□□□□ -0.97
RFC1-215ENST00000512881 RUNDC1Q96C34 613 aa8.98□□□□□ -0.97
RFC1-215ENST00000512881 NYXQ9GZU5 481 aa8.98□□□□□ -0.97
RFC1-215ENST00000512881 TAOK3Q9H2K8 898 aa8.98□□□□□ -0.97
RFC1-215ENST00000512881 AVENQ9NQS1 362 aaPredicted RBP8.98□□□□□ -0.97
RFC1-215ENST00000512881 ITGB2P05107 769 aa8.97□□□□□ -0.97
RFC1-215ENST00000512881 GPTP24298 496 aa8.97□□□□□ -0.97
RFC1-215ENST00000512881 ADH6P28332 368 aa8.97□□□□□ -0.97
RFC1-215ENST00000512881 PTK7Q13308 1070 aa8.97□□□□□ -0.97
RFC1-215ENST00000512881 LAMC2Q13753 1193 aa8.97□□□□□ -0.97
RFC1-215ENST00000512881 ZNF468Q5VIY5 522 aaPredicted RBP8.97□□□□□ -0.97
RFC1-215ENST00000512881 ZNF34Q8IZ26 560 aa8.97□□□□□ -0.97
RFC1-215ENST00000512881 DNAJC5GQ8N7S2 189 aa8.97□□□□□ -0.97
RFC1-215ENST00000512881 MARK1Q9P0L2 795 aa8.97□□□□□ -0.97
RFC1-215ENST00000512881 LTBP3Q9NS15 1303 aa8.97□□□□□ -0.97
RFC1-215ENST00000512881 BRCA1P38398 1863 aaKnown RBP8.96□□□□□ -0.97
RFC1-215ENST00000512881 CHL1O00533 1208 aa8.96□□□□□ -0.98
RFC1-215ENST00000512881 ALDH1B1P30837 517 aa8.96□□□□□ -0.98
RFC1-215ENST00000512881 SEC13P55735 322 aa8.96□□□□□ -0.98
RFC1-215ENST00000512881 GRIN2CQ14957 1233 aa8.96□□□□□ -0.98
RFC1-215ENST00000512881 PROSER3Q2NL68 480 aa8.96□□□□□ -0.98
RFC1-215ENST00000512881 CCDC93Q567U6 631 aa8.96□□□□□ -0.98
RFC1-215ENST00000512881 C1orf53Q5VUE5 145 aa8.96□□□□□ -0.98
RFC1-215ENST00000512881 SUSD4Q5VX71 490 aa8.96□□□□□ -0.98
RFC1-215ENST00000512881 GPAT2Q6NUI2 795 aa8.96□□□□□ -0.98
RFC1-215ENST00000512881 OLFM4Q6UX06 510 aa8.96□□□□□ -0.98
RFC1-215ENST00000512881 LRP10Q7Z4F1 713 aa8.96□□□□□ -0.98
RFC1-215ENST00000512881 SMC1BQ8NDV3 1235 aa8.96□□□□□ -0.98
RFC1-215ENST00000512881 PHACTR1Q9C0D0 580 aa8.96□□□□□ -0.98
RFC1-215ENST00000512881 PRKRIP1Q9H875 184 aaPredicted RBP8.96□□□□□ -0.98
RFC1-215ENST00000512881 MKL2Q9ULH7 1088 aa8.96□□□□□ -0.98
RFC1-215ENST00000512881 LAS1LQ9Y4W2 734 aaKnown RBP8.96□□□□□ -0.98
RFC1-215ENST00000512881 AFDNP55196 1824 aaKnown RBP8.96□□□□□ -0.98
RFC1-215ENST00000512881 USP17L15C9J2P7 530 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 USP17L10C9JJH3 530 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 USP17L13C9JLJ4 530 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 USP17L12C9JPN9 530 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms