RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 APBB1O00213 710 aa14.71□□□□□ -0.05
CDK7-208ENST00000512687 SP3Q02447 781 aa14.71□□□□□ -0.05
CDK7-208ENST00000512687 CCDC84Q86UT8 332 aaPredicted RBP14.71□□□□□ -0.05
CDK7-208ENST00000512687 RPAP2Q8IXW5 612 aaPredicted RBP14.71□□□□□ -0.05
CDK7-208ENST00000512687 PLCD3Q8N3E9 789 aa14.71□□□□□ -0.05
CDK7-208ENST00000512687 ERO1AQ96HE7 468 aa14.71□□□□□ -0.05
CDK7-208ENST00000512687 ZFYVE28Q9HCC9 887 aa14.71□□□□□ -0.05
CDK7-208ENST00000512687 ADGRA2Q96PE1 1338 aa14.7□□□□□ -0.06
CDK7-208ENST00000512687 MAP4K4O95819 1239 aaPredicted RBP14.7□□□□□ -0.06
CDK7-208ENST00000512687 PTPRAP18433 802 aa14.7□□□□□ -0.06
CDK7-208ENST00000512687 DYNLL1P63167 89 aaKnown RBP14.7□□□□□ -0.06
CDK7-208ENST00000512687 RRP1BQ14684 758 aaKnown RBP14.7□□□□□ -0.06
CDK7-208ENST00000512687 ZCCHC17Q9NP64 241 aaKnown RBP14.7□□□□□ -0.06
CDK7-208ENST00000512687 BRCA2P51587 3418 aa14.7□□□□□ -0.06
CDK7-208ENST00000512687 FLT1P17948 1338 aa14.69□□□□□ -0.06
CDK7-208ENST00000512687 TBC1D12O60347 775 aa14.69□□□□□ -0.06
CDK7-208ENST00000512687 PPP4CP60510 307 aa14.69□□□□□ -0.06
CDK7-208ENST00000512687 HSP90AB4PQ58FF6 505 aa14.69□□□□□ -0.06
CDK7-208ENST00000512687 MAPKAPK5Q8IW41 473 aa14.69□□□□□ -0.06
CDK7-208ENST00000512687 TGFBRAP1Q8WUH2 860 aa14.69□□□□□ -0.06
CDK7-208ENST00000512687 TLR2O60603 784 aa14.68□□□□□ -0.06
CDK7-208ENST00000512687 CTNND1O60716 968 aaKnown RBP14.68□□□□□ -0.06
CDK7-208ENST00000512687 HMMRO75330 724 aa14.68□□□□□ -0.06
CDK7-208ENST00000512687 IDH1O75874 414 aaKnown RBP14.68□□□□□ -0.06
CDK7-208ENST00000512687 CYP7A1P22680 504 aa14.68□□□□□ -0.06
CDK7-208ENST00000512687 PDE3AQ14432 1141 aa14.68□□□□□ -0.06
CDK7-208ENST00000512687 GPAT2Q6NUI2 795 aa14.68□□□□□ -0.06
CDK7-208ENST00000512687 ANKRD23Q86SG2 305 aa14.68□□□□□ -0.06
CDK7-208ENST00000512687 KIF1BPQ96EK5 621 aa14.68□□□□□ -0.06
CDK7-208ENST00000512687 NOL10Q9BSC4 688 aaKnown RBP14.68□□□□□ -0.06
CDK7-208ENST00000512687 ARHGAP39Q9C0H5 1083 aa14.68□□□□□ -0.06
CDK7-208ENST00000512687 DNAJC18Q9H819 358 aa14.68□□□□□ -0.06
CDK7-208ENST00000512687 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.68□□□□□ -0.06
CDK7-208ENST00000512687 PICK1Q9NRD5 415 aa14.68□□□□□ -0.06
CDK7-208ENST00000512687 AFG3L2Q9Y4W6 797 aa14.68□□□□□ -0.06
CDK7-208ENST00000512687 ZHX2Q9Y6X8 837 aa14.68□□□□□ -0.06
CDK7-208ENST00000512687 A0A0G2JLL6 359 aaPredicted RBP14.67□□□□□ -0.06
CDK7-208ENST00000512687 PDHXO00330 501 aa14.67□□□□□ -0.06
CDK7-208ENST00000512687 CXCL11O14625 94 aa14.67□□□□□ -0.06
CDK7-208ENST00000512687 BAG3O95817 575 aa14.67□□□□□ -0.06
CDK7-208ENST00000512687 MLLT1Q03111 559 aaPredicted RBP14.67□□□□□ -0.06
CDK7-208ENST00000512687 PRRT2Q7Z6L0 340 aaPredicted RBP14.67□□□□□ -0.06
CDK7-208ENST00000512687 MAGEB6Q8N7X4 407 aa14.67□□□□□ -0.06
CDK7-208ENST00000512687 EFCC1Q9HA90 598 aa14.67□□□□□ -0.06
CDK7-208ENST00000512687 PTPN22Q9Y2R2 807 aa14.67□□□□□ -0.06
CDK7-208ENST00000512687 KIAA0100Q14667 2235 aaKnown RBP14.67□□□□□ -0.06
CDK7-208ENST00000512687 PLCG2P16885 1265 aa14.66□□□□□ -0.06
CDK7-208ENST00000512687 CTGFP29279 349 aa14.66□□□□□ -0.06
CDK7-208ENST00000512687 SHROOM1Q2M3G4 852 aaPredicted RBP14.66□□□□□ -0.06
CDK7-208ENST00000512687 C17orf99Q6UX52 265 aa14.66□□□□□ -0.06
CDK7-208ENST00000512687 CLASRPQ8N2M8 674 aaKnown RBP14.66□□□□□ -0.06
CDK7-208ENST00000512687 MIGA1Q8NAN2 632 aa14.66□□□□□ -0.06
CDK7-208ENST00000512687 BCL11AQ9H165 835 aa14.66□□□□□ -0.06
CDK7-208ENST00000512687 SAP30BPQ9UHR5 308 aaKnown RBP14.66□□□□□ -0.06
CDK7-208ENST00000512687 CPA4Q9UI42 421 aa14.66□□□□□ -0.06
CDK7-208ENST00000512687 PDE4DIPQ5VU43 2346 aa14.66□□□□□ -0.06
CDK7-208ENST00000512687 PLXNB2O15031 1838 aa14.66□□□□□ -0.06
CDK7-208ENST00000512687 TRIM75PA6NK02 468 aa14.65□□□□□ -0.06
CDK7-208ENST00000512687 IGSF3O75054 1194 aa14.65□□□□□ -0.06
CDK7-208ENST00000512687 RAB11FIP3O75154 756 aa14.65□□□□□ -0.06
CDK7-208ENST00000512687 ECM2O94769 699 aaPredicted RBP14.65□□□□□ -0.06
CDK7-208ENST00000512687 JAG1P78504 1218 aa14.65□□□□□ -0.06
CDK7-208ENST00000512687 LACTBP83111 547 aaPredicted RBP14.65□□□□□ -0.06
CDK7-208ENST00000512687 SLC4A8Q2Y0W8 1093 aa14.65□□□□□ -0.06
CDK7-208ENST00000512687 GADL1Q6ZQY3 521 aa14.65□□□□□ -0.06
CDK7-208ENST00000512687 EDC3Q96F86 508 aaKnown RBP14.65□□□□□ -0.06
CDK7-208ENST00000512687 PALD1Q9ULE6 856 aa14.65□□□□□ -0.06
CDK7-208ENST00000512687 SMARCA5O60264 1052 aaPredicted RBP14.64□□□□□ -0.07
CDK7-208ENST00000512687 IFIT2P09913 472 aaKnown RBP14.64□□□□□ -0.07
CDK7-208ENST00000512687 CYP2C8P10632 490 aa14.64□□□□□ -0.07
CDK7-208ENST00000512687 CAP2P40123 477 aa14.64□□□□□ -0.07
CDK7-208ENST00000512687 METTL16Q86W50 562 aaKnown RBP14.64□□□□□ -0.07
CDK7-208ENST00000512687 DNAJC2Q99543 621 aaKnown RBP14.64□□□□□ -0.07
CDK7-208ENST00000512687 CHMP4BQ9H444 224 aaKnown RBP14.64□□□□□ -0.07
CDK7-208ENST00000512687 PI4KBQ9UBF8 816 aa14.64□□□□□ -0.07
CDK7-208ENST00000512687 HERC5Q9UII4 1024 aaKnown RBP14.64□□□□□ -0.07
CDK7-208ENST00000512687 PTCH2Q9Y6C5 1203 aa14.64□□□□□ -0.07
CDK7-208ENST00000512687 GOLIM4O00461 696 aa14.63□□□□□ -0.07
CDK7-208ENST00000512687 MAP3K12Q12852 859 aa14.63□□□□□ -0.07
CDK7-208ENST00000512687 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.63□□□□□ -0.07
CDK7-208ENST00000512687 RIOK1Q9BRS2 568 aaKnown RBP14.63□□□□□ -0.07
CDK7-208ENST00000512687 DHX36Q9H2U1 1008 aaKnown RBP14.63□□□□□ -0.07
CDK7-208ENST00000512687 ZBTB47Q9UFB7 747 aaPredicted RBP14.63□□□□□ -0.07
CDK7-208ENST00000512687 PARP14Q460N5 1801 aa14.62□□□□□ -0.07
CDK7-208ENST00000512687 TCRBV5S4A2TA0A5A2 114 aa14.62□□□□□ -0.07
CDK7-208ENST00000512687 BCRP11274 1271 aa14.62□□□□□ -0.07
CDK7-208ENST00000512687 PDE6AP16499 860 aa14.62□□□□□ -0.07
CDK7-208ENST00000512687 SLFNL1Q499Z3 407 aa14.62□□□□□ -0.07
CDK7-208ENST00000512687 TREML2Q5T2D2 321 aa14.62□□□□□ -0.07
CDK7-208ENST00000512687 FASTKD5Q7L8L6 764 aaKnown RBP14.62□□□□□ -0.07
CDK7-208ENST00000512687 ARMC5Q96C12 935 aa14.62□□□□□ -0.07
CDK7-208ENST00000512687 TRIM47Q96LD4 638 aa14.62□□□□□ -0.07
CDK7-208ENST00000512687 PARK7Q99497 189 aaKnown RBP14.62□□□□□ -0.07
CDK7-208ENST00000512687 MKI67P46013 3256 aaKnown RBP14.62□□□□□ -0.07
CDK7-208ENST00000512687 POTEFA5A3E0 1075 aa14.61□□□□□ -0.07
CDK7-208ENST00000512687 GDF11O95390 407 aa14.61□□□□□ -0.07
CDK7-208ENST00000512687 CHGBP05060 677 aa14.61□□□□□ -0.07
CDK7-208ENST00000512687 EVX2Q03828 476 aa14.61□□□□□ -0.07
CDK7-208ENST00000512687 SPP2Q13103 211 aa14.61□□□□□ -0.07
CDK7-208ENST00000512687 TTF1Q15361 905 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms