RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 DOLKQ9UPQ8 538 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 GPR52Q9Y2T5 361 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 LUC7L2Q9Y383 392 aaKnown RBP7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 GOLGA6L6A8MZA4 724 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 VAMP4O75379 141 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 FAM153BP0C7A2 387 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 FOSL1P15407 271 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 PEX19P40855 299 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 HSD17B7P56937 341 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 SSRP1Q08945 709 aaKnown RBP7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 FUT2Q10981 343 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 IFT88Q13099 833 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 PPP2R5EQ16537 467 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 MAP7D1Q3KQU3 841 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 SLC6A19Q695T7 634 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 CCDC129Q6ZRS4 1044 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 PASD1Q8IV76 773 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 TRIM22Q8IYM9 498 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 NKAIN3Q8N8D7 197 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 WDR66Q8TBY9 1149 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 PI4K2BQ8TCG2 481 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 SCG3Q8WXD2 468 aaKnown RBP7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 C22orf23Q9BZE7 217 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 CUL7Q14999 1698 aa7.43□□□□□ -1.22
TRAPPC11-209ENST00000512476 FAM155AB1AL88 458 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 MICAL2O94851 1124 aa7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 GALNSP34059 522 aa7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 TYW1BQ6NUM6 668 aa7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 PLBD1Q6P4A8 553 aa7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 LCA5Q86VQ0 697 aa7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 PDCD7Q8N8D1 485 aaKnown RBP7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 GIMAP8Q8ND71 665 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 NSUN6Q8TEA1 469 aaKnown RBP7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 PLD4Q96BZ4 506 aa7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 BARD1Q99728 777 aaKnown RBP7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 STK26Q9P289 416 aa7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 SOX5P35711 763 aa7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 EIF4A3P38919 411 aaKnown RBP7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 ABCB5Q2M3G0 1257 aa7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 SLC45A4Q5BKX6 768 aa7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 MRM1Q6IN84 353 aaKnown RBP7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 MZT2BQ6NZ67 158 aa7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 LEO1Q8WVC0 666 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 RPGRQ92834 1020 aaKnown RBP7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 ADAM33Q9BZ11 813 aa7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 STIM2Q9P246 746 aa7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 ZMYM5Q9UJ78 669 aa7.42□□□□□ -1.22
TRAPPC11-209ENST00000512476 CHL1O00533 1208 aa7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 CASP7P55210 303 aa7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 G3BP1Q13283 466 aaKnown RBP eCLIP7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 PCNX4Q63HM2 1172 aa7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 C16orf87Q6PH81 154 aa7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 C11orf74Q86VG3 221 aa7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 FBRSQ9HAH7 460 aa7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 COPAP53621 1224 aa7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 PIP4K2BP78356 416 aa7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 MAP2K1Q02750 393 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 IQCEQ6IPM2 695 aa7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 CNNM4Q6P4Q7 775 aa7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 RIN3Q8TB24 985 aa7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 MGARPQ8TDB4 240 aa7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 COL26A1Q96A83 441 aa7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 CRB3Q9BUF7 120 aa7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 SRRTQ9BXP5 876 aaKnown RBP7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 AAASQ9NRG9 546 aa7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 LRRC4BQ9NT99 713 aa7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 GIMAP2Q9UG22 337 aa7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 PGAP2Q9UHJ9 254 aa7.41□□□□□ -1.22
TRAPPC11-209ENST00000512476 A0A1W2PRU2 124 aa7.4□□□□□ -1.22
TRAPPC11-209ENST00000512476 BOLA2-SMG1P6H3BVE0 249 aa7.4□□□□□ -1.22
TRAPPC11-209ENST00000512476 TNNT2P45379 298 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC11-209ENST00000512476 MRE11P49959 708 aa7.4□□□□□ -1.22
TRAPPC11-209ENST00000512476 KIAA0319Q5VV43 1072 aa7.4□□□□□ -1.22
TRAPPC11-209ENST00000512476 FOXB2Q5VYV0 432 aa7.4□□□□□ -1.22
TRAPPC11-209ENST00000512476 SYDE1Q6ZW31 735 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC11-209ENST00000512476 ANKRD13BQ86YJ7 626 aa7.4□□□□□ -1.22
TRAPPC11-209ENST00000512476 MICALL1Q8N3F8 863 aa7.4□□□□□ -1.22
TRAPPC11-209ENST00000512476 CNTD1Q8N815 330 aa7.4□□□□□ -1.22
TRAPPC11-209ENST00000512476 PPP1R9AQ9ULJ8 1098 aa7.4□□□□□ -1.22
TRAPPC11-209ENST00000512476 TLR6Q9Y2C9 796 aa7.4□□□□□ -1.22
TRAPPC11-209ENST00000512476 AFG3L2Q9Y4W6 797 aa7.4□□□□□ -1.22
TRAPPC11-209ENST00000512476 PBRM1Q86U86 1689 aa7.4□□□□□ -1.22
TRAPPC11-209ENST00000512476 EYA2O00167 538 aa7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 RFPL1O75677 317 aa7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 HSP90AB1P08238 724 aaKnown RBP7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 RAC2P15153 192 aa7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 SDSP20132 328 aa7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 KRT20P35900 424 aa7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 RAD52P43351 418 aa7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 ID4P47928 161 aa7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 NRLP54845 237 aa7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 USP46P62068 366 aa7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 PDE1CQ14123 709 aaPredicted RBP7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 TBCELQ5QJ74 424 aa7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 GJC2Q5T442 439 aaPredicted RBP7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 NXPE4Q6UWF7 544 aa7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 SLC41A1Q8IVJ1 513 aa7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 ARL6IP6Q8N6S5 226 aa7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 PTCD2Q8WV60 388 aaKnown RBP7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 MAP3K14Q99558 947 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms