RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 CDC5LQ99459 802 aaKnown RBP11.72□□□□□ -0.53
SNF8-211ENST00000512243 GREM2Q9H772 168 aa11.72□□□□□ -0.53
SNF8-211ENST00000512243 ZBTB40Q9NUA8 1239 aa11.72□□□□□ -0.53
SNF8-211ENST00000512243 A0A0G2JLW4 131 aa11.71□□□□□ -0.53
SNF8-211ENST00000512243 ANKRD18BA2A2Z9 1011 aa11.71□□□□□ -0.53
SNF8-211ENST00000512243 IFIT5Q13325 482 aaKnown RBP11.71□□□□□ -0.53
SNF8-211ENST00000512243 GRAPQ13588 217 aa11.71□□□□□ -0.53
SNF8-211ENST00000512243 AAMPQ13685 434 aa11.71□□□□□ -0.53
SNF8-211ENST00000512243 CCDC57Q2TAC2 916 aa11.71□□□□□ -0.53
SNF8-211ENST00000512243 SLFNL1Q499Z3 407 aa11.71□□□□□ -0.53
SNF8-211ENST00000512243 EXOC6Q8TAG9 804 aa11.71□□□□□ -0.53
SNF8-211ENST00000512243 GRAPLQ8TC17 118 aaPredicted RBP11.71□□□□□ -0.53
SNF8-211ENST00000512243 CNKSR1Q969H4 720 aa11.71□□□□□ -0.53
SNF8-211ENST00000512243 CRAMP1Q96RY5 1269 aa11.71□□□□□ -0.53
SNF8-211ENST00000512243 SYT17Q9BSW7 474 aa11.71□□□□□ -0.53
SNF8-211ENST00000512243 COL4A1P02462 1669 aa11.71□□□□□ -0.54
SNF8-211ENST00000512243 MYCP01106 439 aaPredicted RBP11.7□□□□□ -0.54
SNF8-211ENST00000512243 ALDH1B1P30837 517 aa11.7□□□□□ -0.54
SNF8-211ENST00000512243 HOXA10P31260 410 aaPredicted RBP11.7□□□□□ -0.54
SNF8-211ENST00000512243 IGHMBP2P38935 993 aaKnown RBP11.7□□□□□ -0.54
SNF8-211ENST00000512243 CEP85Q6P2H3 762 aa11.7□□□□□ -0.54
SNF8-211ENST00000512243 RNF135Q8IUD6 432 aa11.7□□□□□ -0.54
SNF8-211ENST00000512243 ANKRD18AQ8IVF6 992 aa11.7□□□□□ -0.54
SNF8-211ENST00000512243 VWA5B2Q8N398 1253 aa11.7□□□□□ -0.54
SNF8-211ENST00000512243 TTLL6Q8N841 843 aa11.7□□□□□ -0.54
SNF8-211ENST00000512243 SEC31BQ9NQW1 1179 aa11.7□□□□□ -0.54
SNF8-211ENST00000512243 PIM2Q9P1W9 311 aa11.7□□□□□ -0.54
SNF8-211ENST00000512243 DOLKQ9UPQ8 538 aa11.7□□□□□ -0.54
SNF8-211ENST00000512243 SRGAP3O43295 1099 aa11.69□□□□□ -0.54
SNF8-211ENST00000512243 CLN3Q13286 438 aa11.69□□□□□ -0.54
SNF8-211ENST00000512243 MTX1Q13505 466 aa11.69□□□□□ -0.54
SNF8-211ENST00000512243 PRPF40BQ6NWY9 871 aaKnown RBP11.69□□□□□ -0.54
SNF8-211ENST00000512243 PHTF2Q8N3S3 785 aa11.69□□□□□ -0.54
SNF8-211ENST00000512243 POM121Q96HA1 1249 aa11.69□□□□□ -0.54
SNF8-211ENST00000512243 GOLGB1Q14789 3259 aaKnown RBP11.68□□□□□ -0.54
SNF8-211ENST00000512243 FER1L6Q2WGJ9 1857 aa11.68□□□□□ -0.54
SNF8-211ENST00000512243 HMMRO75330 724 aa11.68□□□□□ -0.54
SNF8-211ENST00000512243 KCNA3P22001 575 aa11.68□□□□□ -0.54
SNF8-211ENST00000512243 ATP8B2P98198 1209 aa11.68□□□□□ -0.54
SNF8-211ENST00000512243 KRT76Q01546 638 aa11.68□□□□□ -0.54
SNF8-211ENST00000512243 WASHC4Q2M389 1173 aa11.68□□□□□ -0.54
SNF8-211ENST00000512243 OXLD1Q5BKU9 147 aa11.68□□□□□ -0.54
SNF8-211ENST00000512243 DALRD3Q5D0E6 543 aaKnown RBP11.68□□□□□ -0.54
SNF8-211ENST00000512243 TMC4Q7Z404 712 aa11.68□□□□□ -0.54
SNF8-211ENST00000512243 RPAP2Q8IXW5 612 aaPredicted RBP11.68□□□□□ -0.54
SNF8-211ENST00000512243 CELF1Q92879 486 aaKnown RBP11.68□□□□□ -0.54
SNF8-211ENST00000512243 MPHOSPH8Q99549 860 aa11.68□□□□□ -0.54
SNF8-211ENST00000512243 WWC3Q9ULE0 1092 aa11.68□□□□□ -0.54
SNF8-211ENST00000512243 PNMA6EA0A0J9YXQ4 647 aa11.67□□□□□ -0.54
SNF8-211ENST00000512243 BBOX1O75936 387 aa11.67□□□□□ -0.54
SNF8-211ENST00000512243 RPS8P62241 208 aaKnown RBP11.67□□□□□ -0.54
SNF8-211ENST00000512243 NANOS1Q8WY41 292 aaKnown RBP11.67□□□□□ -0.54
SNF8-211ENST00000512243 CNTNAP3BQ96NU0 1288 aa11.67□□□□□ -0.54
SNF8-211ENST00000512243 CNTNAP3Q9BZ76 1288 aa11.67□□□□□ -0.54
SNF8-211ENST00000512243 TMX4Q9H1E5 349 aaPredicted RBP11.67□□□□□ -0.54
SNF8-211ENST00000512243 BCS1LQ9Y276 419 aa11.67□□□□□ -0.54
SNF8-211ENST00000512243 CCDC88AQ3V6T2 1871 aa11.67□□□□□ -0.54
SNF8-211ENST00000512243 LTBP1Q14766 1721 aa11.66□□□□□ -0.54
SNF8-211ENST00000512243 GPC1P35052 558 aa11.66□□□□□ -0.54
SNF8-211ENST00000512243 RFX5P48382 616 aaPredicted RBP11.66□□□□□ -0.54
SNF8-211ENST00000512243 POU4F2Q12837 409 aa11.66□□□□□ -0.54
SNF8-211ENST00000512243 SSH3Q8TE77 659 aa11.66□□□□□ -0.54
SNF8-211ENST00000512243 ZNF594Q96JF6 807 aaPredicted RBP11.66□□□□□ -0.54
SNF8-211ENST00000512243 COL25A1Q9BXS0 654 aaPredicted RBP11.66□□□□□ -0.54
SNF8-211ENST00000512243 CNNM1Q9NRU3 951 aa11.66□□□□□ -0.54
SNF8-211ENST00000512243 CUEDC1Q9NWM3 386 aaPredicted RBP11.66□□□□□ -0.54
SNF8-211ENST00000512243 IL2RAP01589 272 aa11.65□□□□□ -0.54
SNF8-211ENST00000512243 PTPN12Q05209 780 aaKnown RBP11.65□□□□□ -0.54
SNF8-211ENST00000512243 SEMA3FQ13275 785 aa11.65□□□□□ -0.54
SNF8-211ENST00000512243 SOGA3Q5TF21 947 aa11.65□□□□□ -0.54
SNF8-211ENST00000512243 LDHAL6AQ6ZMR3 332 aa11.65□□□□□ -0.54
SNF8-211ENST00000512243 KLHDC4Q8TBB5 520 aa11.65□□□□□ -0.54
SNF8-211ENST00000512243 SIL1Q9H173 461 aa11.65□□□□□ -0.54
SNF8-211ENST00000512243 BSDC1Q9NW68 430 aaPredicted RBP11.65□□□□□ -0.54
SNF8-211ENST00000512243 PA2G4Q9UQ80 394 aaKnown RBP11.65□□□□□ -0.54
SNF8-211ENST00000512243 ATP6V0A2Q9Y487 856 aa11.65□□□□□ -0.54
SNF8-211ENST00000512243 ARAP2Q8WZ64 1704 aa11.64□□□□□ -0.55
SNF8-211ENST00000512243 STAU1O95793 577 aaKnown RBP11.64□□□□□ -0.55
SNF8-211ENST00000512243 GNRH1P01148 92 aa11.64□□□□□ -0.55
SNF8-211ENST00000512243 OS9Q13438 667 aaPredicted RBP11.64□□□□□ -0.55
SNF8-211ENST00000512243 CCDC93Q567U6 631 aa11.64□□□□□ -0.55
SNF8-211ENST00000512243 RNFT1Q5M7Z0 435 aa11.64□□□□□ -0.55
SNF8-211ENST00000512243 SV2AQ7L0J3 742 aa11.64□□□□□ -0.55
SNF8-211ENST00000512243 COPRSQ9NQ92 184 aa11.64□□□□□ -0.55
SNF8-211ENST00000512243 MYH13Q9UKX3 1938 aa11.64□□□□□ -0.55
SNF8-211ENST00000512243 DICER1Q9UPY3 1922 aaKnown RBP11.64□□□□□ -0.55
SNF8-211ENST00000512243 SBF1O95248 1867 aa11.63□□□□□ -0.55
SNF8-211ENST00000512243 CHD4Q14839 1912 aa11.63□□□□□ -0.55
SNF8-211ENST00000512243 EYA2O00167 538 aa11.63□□□□□ -0.55
SNF8-211ENST00000512243 C21orf2O43822 256 aa11.63□□□□□ -0.55
SNF8-211ENST00000512243 CIAO1O76071 339 aa11.63□□□□□ -0.55
SNF8-211ENST00000512243 G3BP1Q13283 466 aaKnown RBP eCLIP11.63□□□□□ -0.55
SNF8-211ENST00000512243 LRRC24Q50LG9 513 aa11.63□□□□□ -0.55
SNF8-211ENST00000512243 METTL24Q5JXM2 366 aa11.63□□□□□ -0.55
SNF8-211ENST00000512243 SIRT2Q8IXJ6 389 aa11.63□□□□□ -0.55
SNF8-211ENST00000512243 SP8Q8IXZ3 490 aa11.63□□□□□ -0.55
SNF8-211ENST00000512243 PUS3Q9BZE2 481 aaKnown RBP11.63□□□□□ -0.55
SNF8-211ENST00000512243 GRIP2Q9C0E4 1043 aa11.63□□□□□ -0.55
SNF8-211ENST00000512243 DUOX1Q9NRD9 1551 aa11.62□□□□□ -0.55
SNF8-211ENST00000512243 XDHP47989 1333 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms