RNA–Protein interactions for RNA: ENST00000512191.1

CAST-237, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-237ENST00000512191 SMC1BQ8NDV3 1235 aa6.29□□□□□ -1.4
CAST-237ENST00000512191 CALR3Q96L12 384 aaKnown RBP6.29□□□□□ -1.4
CAST-237ENST00000512191 C21orf2O43822 256 aa6.28□□□□□ -1.4
CAST-237ENST00000512191 LILRB5O75023 590 aa6.28□□□□□ -1.4
CAST-237ENST00000512191 DKK1O94907 266 aa6.28□□□□□ -1.4
CAST-237ENST00000512191 STARD3NLO95772 234 aa6.28□□□□□ -1.4
CAST-237ENST00000512191 ALBP02768 609 aa6.28□□□□□ -1.4
CAST-237ENST00000512191 SULT6B1Q6IMI4 303 aa6.28□□□□□ -1.4
CAST-237ENST00000512191 SMIM5Q71RC9 77 aa6.28□□□□□ -1.4
CAST-237ENST00000512191 ZNF280CQ8ND82 737 aa6.28□□□□□ -1.4
CAST-237ENST00000512191 BHMTQ93088 406 aa6.28□□□□□ -1.4
CAST-237ENST00000512191 CLUAP1Q96AJ1 413 aa6.28□□□□□ -1.4
CAST-237ENST00000512191 PNMA5Q96PV4 448 aa6.28□□□□□ -1.4
CAST-237ENST00000512191 HINFPQ9BQA5 517 aa6.28□□□□□ -1.4
CAST-237ENST00000512191 UBE2OQ9C0C9 1292 aaKnown RBP6.28□□□□□ -1.4
CAST-237ENST00000512191 PANK3Q9H999 370 aa6.28□□□□□ -1.4
CAST-237ENST00000512191 SLC52A2Q9HAB3 445 aa6.28□□□□□ -1.4
CAST-237ENST00000512191 RNF181Q9P0P0 153 aa6.28□□□□□ -1.4
CAST-237ENST00000512191 COL5A3P25940 1745 aaPredicted RBP6.28□□□□□ -1.4
CAST-237ENST00000512191 KDM6AO15550 1401 aaPredicted RBP6.27□□□□□ -1.41
CAST-237ENST00000512191 A0A087WZG4 1122 aa6.27□□□□□ -1.41
CAST-237ENST00000512191 A6NJR5 290 aa6.27□□□□□ -1.41
CAST-237ENST00000512191 FAM196BA6NMK8 535 aa6.27□□□□□ -1.41
CAST-237ENST00000512191 H0YIN7 160 aa6.27□□□□□ -1.41
CAST-237ENST00000512191 TGFBR3LH3BV60 316 aa6.27□□□□□ -1.41
CAST-237ENST00000512191 LMNB1P20700 586 aa6.27□□□□□ -1.41
CAST-237ENST00000512191 IGFBP4P22692 258 aa6.27□□□□□ -1.41
CAST-237ENST00000512191 PCSK7Q16549 785 aa6.27□□□□□ -1.41
CAST-237ENST00000512191 RAB44Q7Z6P3 723 aaPredicted RBP6.27□□□□□ -1.41
CAST-237ENST00000512191 TTC5Q8N0Z6 440 aa6.27□□□□□ -1.41
CAST-237ENST00000512191 DNAJC5GQ8N7S2 189 aa6.27□□□□□ -1.41
CAST-237ENST00000512191 TEX13AQ9BXU3 409 aaPredicted RBP6.27□□□□□ -1.41
CAST-237ENST00000512191 PPP1R12CQ9BZL4 782 aa6.27□□□□□ -1.41
CAST-237ENST00000512191 NMRK2Q9NPI5 230 aa6.27□□□□□ -1.41
CAST-237ENST00000512191 STARD13Q9Y3M8 1113 aa6.27□□□□□ -1.41
CAST-237ENST00000512191 ARFGEF1Q9Y6D6 1849 aa6.27□□□□□ -1.41
CAST-237ENST00000512191 N4BP2Q86UW6 1770 aaPredicted RBP6.26□□□□□ -1.41
CAST-237ENST00000512191 POLRMTO00411 1230 aaKnown RBP6.26□□□□□ -1.41
CAST-237ENST00000512191 VEGFAP15692 232 aaPredicted RBP6.26□□□□□ -1.41
CAST-237ENST00000512191 KCNA3P22001 575 aa6.26□□□□□ -1.41
CAST-237ENST00000512191 TM4SF1P30408 202 aa6.26□□□□□ -1.41
CAST-237ENST00000512191 PDE6BP35913 854 aa6.26□□□□□ -1.41
CAST-237ENST00000512191 TBC1D8BQ0IIM8 1120 aa6.26□□□□□ -1.41
CAST-237ENST00000512191 DOC2BQ14184 412 aa6.26□□□□□ -1.41
CAST-237ENST00000512191 SOGA3Q5TF21 947 aa6.26□□□□□ -1.41
CAST-237ENST00000512191 TTLL6Q8N841 843 aa6.26□□□□□ -1.41
CAST-237ENST00000512191 VRTNQ9H8Y1 702 aa6.26□□□□□ -1.41
CAST-237ENST00000512191 NARFQ9UHQ1 456 aa6.26□□□□□ -1.41
CAST-237ENST00000512191 SOS1Q07889 1333 aaPredicted RBP6.25□□□□□ -1.41
CAST-237ENST00000512191 KIAA1551Q9HCM1 1747 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 GLTPD2A6NH11 291 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 USP17L15C9J2P7 530 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 USP17L10C9JJH3 530 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 USP17L13C9JLJ4 530 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 USP17L12C9JPN9 530 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 USP17L11C9JVI0 530 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 USP17L21D6R901 530 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 USP17L18D6R9N7 530 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 USP17L22D6RA61 530 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 USP17L17D6RBQ6 530 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 USP17L19D6RCP7 530 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 USP17L20D6RJB6 530 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 NPHP1O15259 732 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 CYP19A1P11511 503 aaPredicted RBP6.25□□□□□ -1.41
CAST-237ENST00000512191 NID1P14543 1247 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 IL13P35225 146 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 RAC1P63000 192 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 DDR1Q08345 913 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 USP17L24Q0WX57 530 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 DPYDQ12882 1025 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 PTK7Q13308 1070 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 CCINQ13939 588 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 XP32Q5T750 250 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 USPL1Q5W0Q7 1092 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 INTS5Q6P9B9 1019 aaKnown RBP6.25□□□□□ -1.41
CAST-237ENST00000512191 C20orf204Q6ZNR8 217 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 AEBP1Q8IUX7 1158 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 ANKMY2Q8IV38 441 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 JMYQ8N9B5 988 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 VTI1AQ96AJ9 217 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 PCGF6Q9BYE7 350 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.25□□□□□ -1.41
CAST-237ENST00000512191 SRP68Q9UHB9 627 aaKnown RBP6.25□□□□□ -1.41
CAST-237ENST00000512191 SLC6A14Q9UN76 642 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 COL15A1P39059 1388 aa6.25□□□□□ -1.41
CAST-237ENST00000512191 TNRC6CQ9HCJ0 1690 aaKnown RBP6.25□□□□□ -1.41
CAST-237ENST00000512191 BRCA1P38398 1863 aaKnown RBP6.25□□□□□ -1.41
CAST-237ENST00000512191 C9orf172C9J069 976 aa6.24□□□□□ -1.41
CAST-237ENST00000512191 RNMTO43148 476 aaKnown RBP6.24□□□□□ -1.41
CAST-237ENST00000512191 DIAPH1O60610 1272 aaKnown RBP6.24□□□□□ -1.41
CAST-237ENST00000512191 SERPINB2P05120 415 aa6.24□□□□□ -1.41
CAST-237ENST00000512191 HSPA5P11021 654 aaKnown RBP6.24□□□□□ -1.41
CAST-237ENST00000512191 CHRNA5P30532 468 aa6.24□□□□□ -1.41
CAST-237ENST00000512191 TEFQ10587 303 aa6.24□□□□□ -1.41
CAST-237ENST00000512191 COL9A3Q14050 684 aaPredicted RBP6.24□□□□□ -1.41
CAST-237ENST00000512191 NFIXQ14938 502 aa6.24□□□□□ -1.41
CAST-237ENST00000512191 CRTC2Q53ET0 693 aaPredicted RBP6.24□□□□□ -1.41
CAST-237ENST00000512191 DNAJC10Q8IXB1 793 aa6.24□□□□□ -1.41
CAST-237ENST00000512191 SEMA6BQ9H3T3 888 aa6.24□□□□□ -1.41
CAST-237ENST00000512191 C11orf16Q9NQ32 467 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms