RNA–Protein interactions for RNA: ENST00000512094.5

NPHP3-210, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-210ENST00000512094 CYFIP1Q7L576 1253 aa9.2□□□□□ -0.94
NPHP3-210ENST00000512094 UBE3DQ7Z6J8 389 aa9.2□□□□□ -0.94
NPHP3-210ENST00000512094 CCER1Q8TC90 406 aaPredicted RBP9.2□□□□□ -0.94
NPHP3-210ENST00000512094 CBX8Q9HC52 389 aa9.2□□□□□ -0.94
NPHP3-210ENST00000512094 PICK1Q9NRD5 415 aa9.2□□□□□ -0.94
NPHP3-210ENST00000512094 ZSCAN22P10073 491 aaPredicted RBP9.19□□□□□ -0.94
NPHP3-210ENST00000512094 NTF4P34130 210 aa9.19□□□□□ -0.94
NPHP3-210ENST00000512094 ZNF252P-AS1Q0IIN9 211 aa9.19□□□□□ -0.94
NPHP3-210ENST00000512094 LILRA6Q6PI73 481 aa9.19□□□□□ -0.94
NPHP3-210ENST00000512094 PI16Q6UXB8 463 aa9.19□□□□□ -0.94
NPHP3-210ENST00000512094 CARS2Q9HA77 564 aaKnown RBP9.19□□□□□ -0.94
NPHP3-210ENST00000512094 PRDM5Q9NQX1 630 aaPredicted RBP9.19□□□□□ -0.94
NPHP3-210ENST00000512094 NLRP2Q9NX02 1062 aa9.19□□□□□ -0.94
NPHP3-210ENST00000512094 LMCD1Q9NZU5 365 aa9.19□□□□□ -0.94
NPHP3-210ENST00000512094 AKAP2Q9Y2D5 859 aa9.19□□□□□ -0.94
NPHP3-210ENST00000512094 TMEM67Q5HYA8 995 aa9.18□□□□□ -0.94
NPHP3-210ENST00000512094 BCO2Q9BYV7 579 aa9.18□□□□□ -0.94
NPHP3-210ENST00000512094 FOXQ1Q9C009 403 aa9.18□□□□□ -0.94
NPHP3-210ENST00000512094 DCDC2CA8MYV0 355 aa9.17□□□□□ -0.94
NPHP3-210ENST00000512094 EOMESO95936 686 aa9.17□□□□□ -0.94
NPHP3-210ENST00000512094 C1QTNF9P0C862 333 aa9.17□□□□□ -0.94
NPHP3-210ENST00000512094 MPRIPQ6WCQ1 1025 aa9.17□□□□□ -0.94
NPHP3-210ENST00000512094 SIAH1Q8IUQ4 282 aa9.17□□□□□ -0.94
NPHP3-210ENST00000512094 ALKBH8Q96BT7 664 aaKnown RBP9.17□□□□□ -0.94
NPHP3-210ENST00000512094 DMRTB1Q96MA1 342 aa9.17□□□□□ -0.94
NPHP3-210ENST00000512094 CACNA2D2Q9NY47 1150 aa9.16□□□□□ -0.94
NPHP3-210ENST00000512094 MAPK8IP1Q9UQF2 711 aa9.16□□□□□ -0.94
NPHP3-210ENST00000512094 USTQ9Y2C2 406 aa9.16□□□□□ -0.94
NPHP3-210ENST00000512094 NFIBO00712 420 aa9.15□□□□□ -0.94
NPHP3-210ENST00000512094 CDC37L1Q7L3B6 337 aa9.15□□□□□ -0.94
NPHP3-210ENST00000512094 ARMCX6Q7L4S7 300 aa9.15□□□□□ -0.94
NPHP3-210ENST00000512094 C12orf40Q86WS4 652 aa9.15□□□□□ -0.94
NPHP3-210ENST00000512094 FBXO15Q8NCQ5 510 aaPredicted RBP9.15□□□□□ -0.94
NPHP3-210ENST00000512094 KRTAP4-5Q9BYR2 181 aa9.15□□□□□ -0.94
NPHP3-210ENST00000512094 ATP13A1Q9HD20 1204 aa9.15□□□□□ -0.94
NPHP3-210ENST00000512094 C19orf73Q9NVV2 129 aa9.15□□□□□ -0.94
NPHP3-210ENST00000512094 FANCGO15287 622 aa9.14□□□□□ -0.95
NPHP3-210ENST00000512094 KRT1P04264 644 aa9.14□□□□□ -0.95
NPHP3-210ENST00000512094 ZBTB37Q5TC79 503 aa9.14□□□□□ -0.95
NPHP3-210ENST00000512094 HSPA12BQ96MM6 686 aa9.14□□□□□ -0.95
NPHP3-210ENST00000512094 DIRC2Q96SL1 478 aa9.14□□□□□ -0.95
NPHP3-210ENST00000512094 NSUN3Q9H649 340 aaKnown RBP9.14□□□□□ -0.95
NPHP3-210ENST00000512094 NCANO14594 1321 aa9.13□□□□□ -0.95
NPHP3-210ENST00000512094 FAM155AB1AL88 458 aaPredicted RBP9.13□□□□□ -0.95
NPHP3-210ENST00000512094 GDNFP39905 211 aa9.13□□□□□ -0.95
NPHP3-210ENST00000512094 RING1Q06587 406 aa9.13□□□□□ -0.95
NPHP3-210ENST00000512094 GRIN3AQ8TCU5 1115 aa9.13□□□□□ -0.95
NPHP3-210ENST00000512094 NECAB3Q96P71 396 aaPredicted RBP9.13□□□□□ -0.95
NPHP3-210ENST00000512094 SEMA3GQ9NS98 782 aa9.13□□□□□ -0.95
NPHP3-210ENST00000512094 TRIM37O94972 964 aa9.12□□□□□ -0.95
NPHP3-210ENST00000512094 NXPE4Q6UWF7 544 aa9.12□□□□□ -0.95
NPHP3-210ENST00000512094 NPAS4Q8IUM7 802 aa9.12□□□□□ -0.95
NPHP3-210ENST00000512094 KCT2Q8NC54 265 aa9.12□□□□□ -0.95
NPHP3-210ENST00000512094 RBCK1Q9BYM8 510 aa9.12□□□□□ -0.95
NPHP3-210ENST00000512094 PRR33A8MZF0 331 aa9.11□□□□□ -0.95
NPHP3-210ENST00000512094 PRRG2O14669 202 aa9.11□□□□□ -0.95
NPHP3-210ENST00000512094 LRIG2O94898 1065 aa9.11□□□□□ -0.95
NPHP3-210ENST00000512094 LCE5AQ5TCM9 118 aa9.11□□□□□ -0.95
NPHP3-210ENST00000512094 CDKAL1Q5VV42 579 aa9.11□□□□□ -0.95
NPHP3-210ENST00000512094 MFSD4AQ8N468 514 aa9.11□□□□□ -0.95
NPHP3-210ENST00000512094 B8ZZF3 427 aa9.1□□□□□ -0.95
NPHP3-210ENST00000512094 NPIPB6E9PJ23 425 aa9.1□□□□□ -0.95
NPHP3-210ENST00000512094 TPTE2Q6XPS3 522 aa9.1□□□□□ -0.95
NPHP3-210ENST00000512094 TTLL10Q6ZVT0 673 aa9.1□□□□□ -0.95
NPHP3-210ENST00000512094 TPX2Q9ULW0 747 aaKnown RBP9.1□□□□□ -0.95
NPHP3-210ENST00000512094 SAMM50Q9Y512 469 aa9.1□□□□□ -0.95
NPHP3-210ENST00000512094 H3BS24 57 aa9.09□□□□□ -0.95
NPHP3-210ENST00000512094 SLITRK5O94991 958 aa9.09□□□□□ -0.95
NPHP3-210ENST00000512094 BMP6P22004 513 aa9.09□□□□□ -0.95
NPHP3-210ENST00000512094 SFRP5Q5T4F7 317 aa9.09□□□□□ -0.95
NPHP3-210ENST00000512094 C3orf58Q8NDZ4 430 aa9.09□□□□□ -0.95
NPHP3-210ENST00000512094 ELMO3Q96BJ8 720 aa9.09□□□□□ -0.95
NPHP3-210ENST00000512094 PCDHA4Q9UN74 947 aa9.09□□□□□ -0.95
NPHP3-210ENST00000512094 ENC1O14682 589 aa9.08□□□□□ -0.96
NPHP3-210ENST00000512094 PAGE1O75459 146 aa9.08□□□□□ -0.96
NPHP3-210ENST00000512094 TMEM253P0C7T8 217 aa9.08□□□□□ -0.96
NPHP3-210ENST00000512094 FGD1P98174 961 aa9.08□□□□□ -0.96
NPHP3-210ENST00000512094 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.08□□□□□ -0.96
NPHP3-210ENST00000512094 LLGL2Q6P1M3 1020 aa9.08□□□□□ -0.96
NPHP3-210ENST00000512094 C22orf34Q6ZV56 151 aa9.08□□□□□ -0.96
NPHP3-210ENST00000512094 ZNF507Q8TCN5 953 aa9.08□□□□□ -0.96
NPHP3-210ENST00000512094 CCDC120Q96HB5 630 aa9.08□□□□□ -0.96
NPHP3-210ENST00000512094 RAPGEFL1Q9UHV5 662 aa9.08□□□□□ -0.96
NPHP3-210ENST00000512094 MIPEPQ99797 713 aa9.07□□□□□ -0.96
NPHP3-210ENST00000512094 EPB41L4BQ9H329 900 aa9.07□□□□□ -0.96
NPHP3-210ENST00000512094 C1orf115Q9H7X2 142 aa9.07□□□□□ -0.96
NPHP3-210ENST00000512094 CNTNAP4Q9C0A0 1308 aa9.06□□□□□ -0.96
NPHP3-210ENST00000512094 TXNDC2Q86VQ3 553 aa9.06□□□□□ -0.96
NPHP3-210ENST00000512094 AMIGO3Q86WK7 504 aa9.06□□□□□ -0.96
NPHP3-210ENST00000512094 ALPK1Q96QP1 1244 aa9.06□□□□□ -0.96
NPHP3-210ENST00000512094 CEP44Q9C0F1 390 aa9.06□□□□□ -0.96
NPHP3-210ENST00000512094 KCNK12Q9HB15 430 aa9.06□□□□□ -0.96
NPHP3-210ENST00000512094 CD320Q9NPF0 282 aa9.06□□□□□ -0.96
NPHP3-210ENST00000512094 DCP1AQ9NPI6 582 aaPredicted RBP9.06□□□□□ -0.96
NPHP3-210ENST00000512094 CAPN6Q9Y6Q1 641 aa9.06□□□□□ -0.96
NPHP3-210ENST00000512094 PNMA6FA0A0J9YX94 578 aa9.05□□□□□ -0.96
NPHP3-210ENST00000512094 PRAMEF27A3QJZ7 478 aa9.05□□□□□ -0.96
NPHP3-210ENST00000512094 FBXO24O75426 580 aa9.05□□□□□ -0.96
NPHP3-210ENST00000512094 BUD31P41223 144 aaPredicted RBP9.05□□□□□ -0.96
NPHP3-210ENST00000512094 LRRC14Q15048 493 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms