RNA–Protein interactions for RNA: ENST00000511754.5

TNPO1-208, Transcript of transportin 1, humanhuman

TSL 5

Gene TNPO1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-208ENST00000511754 NEFMP07197 916 aa6.23□□□□□ -1.41
TNPO1-208ENST00000511754 BMP6P22004 513 aa6.23□□□□□ -1.41
TNPO1-208ENST00000511754 IFI16Q16666 785 aaKnown RBP6.23□□□□□ -1.41
TNPO1-208ENST00000511754 SCARA3Q6AZY7 606 aa6.23□□□□□ -1.41
TNPO1-208ENST00000511754 LLGL2Q6P1M3 1020 aa6.23□□□□□ -1.41
TNPO1-208ENST00000511754 LCNL1Q6ZST4 164 aa6.23□□□□□ -1.41
TNPO1-208ENST00000511754 CDC37L1Q7L3B6 337 aa6.23□□□□□ -1.41
TNPO1-208ENST00000511754 SIAH1Q8IUQ4 282 aa6.23□□□□□ -1.41
TNPO1-208ENST00000511754 RAPGEFL1Q9UHV5 662 aa6.23□□□□□ -1.41
TNPO1-208ENST00000511754 VAV3Q9UKW4 847 aa6.23□□□□□ -1.41
TNPO1-208ENST00000511754 FBXO24O75426 580 aa6.22□□□□□ -1.41
TNPO1-208ENST00000511754 LEFTY1O75610 366 aa6.22□□□□□ -1.41
TNPO1-208ENST00000511754 RAP1GAPP47736 663 aa6.22□□□□□ -1.41
TNPO1-208ENST00000511754 PPM1JQ5JR12 505 aa6.22□□□□□ -1.41
TNPO1-208ENST00000511754 SPRED2Q7Z698 418 aa6.22□□□□□ -1.41
TNPO1-208ENST00000511754 C1QL4Q86Z23 238 aa6.22□□□□□ -1.41
TNPO1-208ENST00000511754 TOP6BLQ8N6T0 577 aa6.22□□□□□ -1.41
TNPO1-208ENST00000511754 GRIN3AQ8TCU5 1115 aa6.22□□□□□ -1.41
TNPO1-208ENST00000511754 FRMD6Q96NE9 622 aa6.22□□□□□ -1.41
TNPO1-208ENST00000511754 CACNA2D2Q9NY47 1150 aa6.22□□□□□ -1.41
TNPO1-208ENST00000511754 FAM8A1Q9UBU6 413 aa6.22□□□□□ -1.41
TNPO1-208ENST00000511754 GTF2IRD1Q9UHL9 959 aa6.22□□□□□ -1.41
TNPO1-208ENST00000511754 WWC3Q9ULE0 1092 aa6.22□□□□□ -1.41
TNPO1-208ENST00000511754 PCDHA4Q9UN74 947 aa6.22□□□□□ -1.41
TNPO1-208ENST00000511754 CYP8B1Q9UNU6 501 aa6.22□□□□□ -1.41
TNPO1-208ENST00000511754 CSADQ9Y600 493 aa6.22□□□□□ -1.41
TNPO1-208ENST00000511754 TMEM265A0A087WTH1 108 aa6.21□□□□□ -1.42
TNPO1-208ENST00000511754 DCDC2CA8MYV0 355 aa6.21□□□□□ -1.42
TNPO1-208ENST00000511754 FANCGO15287 622 aa6.21□□□□□ -1.42
TNPO1-208ENST00000511754 PAGE1O75459 146 aa6.21□□□□□ -1.42
TNPO1-208ENST00000511754 PRKCQQ04759 706 aa6.21□□□□□ -1.42
TNPO1-208ENST00000511754 BNIP3Q12983 259 aa6.21□□□□□ -1.42
TNPO1-208ENST00000511754 MPRIPQ6WCQ1 1025 aa6.21□□□□□ -1.42
TNPO1-208ENST00000511754 ZNF574Q6ZN55 896 aaPredicted RBP6.21□□□□□ -1.42
TNPO1-208ENST00000511754 TTLL10Q6ZVT0 673 aa6.21□□□□□ -1.42
TNPO1-208ENST00000511754 C12orf40Q86WS4 652 aa6.21□□□□□ -1.42
TNPO1-208ENST00000511754 KCT2Q8NC54 265 aa6.21□□□□□ -1.42
TNPO1-208ENST00000511754 ANKRD24Q8TF21 1146 aa6.21□□□□□ -1.42
TNPO1-208ENST00000511754 ELMO3Q96BJ8 720 aa6.21□□□□□ -1.42
TNPO1-208ENST00000511754 HRASLS5Q96KN8 279 aa6.21□□□□□ -1.42
TNPO1-208ENST00000511754 SETDB2Q96T68 719 aa6.21□□□□□ -1.42
TNPO1-208ENST00000511754 C12orf49Q9H741 205 aa6.21□□□□□ -1.42
TNPO1-208ENST00000511754 LMCD1Q9NZU5 365 aa6.21□□□□□ -1.42
TNPO1-208ENST00000511754 CEACAM5P06731 702 aa6.2□□□□□ -1.42
TNPO1-208ENST00000511754 LDHBP07195 334 aaKnown RBP6.2□□□□□ -1.42
TNPO1-208ENST00000511754 FGD1P98174 961 aa6.2□□□□□ -1.42
TNPO1-208ENST00000511754 AOC3Q16853 763 aa6.2□□□□□ -1.42
TNPO1-208ENST00000511754 LRRC56Q8IYG6 542 aaPredicted RBP6.2□□□□□ -1.42
TNPO1-208ENST00000511754 RC3H2Q9HBD1 1191 aaKnown RBP6.2□□□□□ -1.42
TNPO1-208ENST00000511754 PRDM10Q9NQV6 1147 aa6.2□□□□□ -1.42
TNPO1-208ENST00000511754 USP17L7P0C7H9 530 aa6.19□□□□□ -1.42
TNPO1-208ENST00000511754 ZSCAN22P10073 491 aaPredicted RBP6.19□□□□□ -1.42
TNPO1-208ENST00000511754 CD8BP10966 210 aa6.19□□□□□ -1.42
TNPO1-208ENST00000511754 ITIH2P19823 946 aa6.19□□□□□ -1.42
TNPO1-208ENST00000511754 OXCT1P55809 520 aa6.19□□□□□ -1.42
TNPO1-208ENST00000511754 PCNX4Q63HM2 1172 aa6.19□□□□□ -1.42
TNPO1-208ENST00000511754 PI4K2BQ8TCG2 481 aa6.19□□□□□ -1.42
TNPO1-208ENST00000511754 TTF2Q9UNY4 1162 aaKnown RBP6.19□□□□□ -1.42
TNPO1-208ENST00000511754 P4HBP07237 508 aaKnown RBP6.18□□□□□ -1.42
TNPO1-208ENST00000511754 LMNB1P20700 586 aa6.18□□□□□ -1.42
TNPO1-208ENST00000511754 FUT4P22083 530 aa6.18□□□□□ -1.42
TNPO1-208ENST00000511754 RING1Q06587 406 aa6.18□□□□□ -1.42
TNPO1-208ENST00000511754 ZBTB37Q5TC79 503 aa6.18□□□□□ -1.42
TNPO1-208ENST00000511754 SV2BQ7L1I2 683 aa6.18□□□□□ -1.42
TNPO1-208ENST00000511754 HDXQ7Z353 690 aa6.18□□□□□ -1.42
TNPO1-208ENST00000511754 WFDC3Q8IUB2 231 aa6.18□□□□□ -1.42
TNPO1-208ENST00000511754 ZNF507Q8TCN5 953 aa6.18□□□□□ -1.42
TNPO1-208ENST00000511754 TRAIPQ9BWF2 469 aa6.18□□□□□ -1.42
TNPO1-208ENST00000511754 SNX11Q9Y5W9 270 aa6.18□□□□□ -1.42
TNPO1-208ENST00000511754 LRRC10BA6NIK2 292 aa6.17□□□□□ -1.42
TNPO1-208ENST00000511754 GNAT3A8MTJ3 354 aa6.17□□□□□ -1.42
TNPO1-208ENST00000511754 IGF2BP3O00425 579 aaKnown RBP eCLIP6.17□□□□□ -1.42
TNPO1-208ENST00000511754 CELA3AP09093 270 aa6.17□□□□□ -1.42
TNPO1-208ENST00000511754 EIF4BP23588 611 aaKnown RBP6.17□□□□□ -1.42
TNPO1-208ENST00000511754 ANGEL2Q5VTE6 544 aaKnown RBP6.17□□□□□ -1.42
TNPO1-208ENST00000511754 ASB11Q8WXH4 323 aa6.17□□□□□ -1.42
TNPO1-208ENST00000511754 TSPAN15O95858 294 aa6.16□□□□□ -1.42
TNPO1-208ENST00000511754 RNASE1P07998 156 aaKnown RBP6.16□□□□□ -1.42
TNPO1-208ENST00000511754 GNA15P30679 374 aa6.16□□□□□ -1.42
TNPO1-208ENST00000511754 NTF4P34130 210 aa6.16□□□□□ -1.42
TNPO1-208ENST00000511754 HEXIM2Q96MH2 286 aaKnown RBP6.16□□□□□ -1.42
TNPO1-208ENST00000511754 PLAGL2Q9UPG8 496 aa6.16□□□□□ -1.42
TNPO1-208ENST00000511754 U3KQE9 123 aa6.16□□□□□ -1.42
TNPO1-208ENST00000511754 PRAMEF27A3QJZ7 478 aa6.15□□□□□ -1.42
TNPO1-208ENST00000511754 PRPF40AO75400 957 aaKnown RBP6.15□□□□□ -1.42
TNPO1-208ENST00000511754 LRIG2O94898 1065 aa6.15□□□□□ -1.42
TNPO1-208ENST00000511754 CD96P40200 585 aa6.15□□□□□ -1.42
TNPO1-208ENST00000511754 RASIP1Q5U651 963 aa6.15□□□□□ -1.42
TNPO1-208ENST00000511754 TTBK2Q6IQ55 1244 aa6.15□□□□□ -1.42
TNPO1-208ENST00000511754 ARMCX6Q7L4S7 300 aa6.15□□□□□ -1.42
TNPO1-208ENST00000511754 ANKLE2Q86XL3 938 aa6.15□□□□□ -1.42
TNPO1-208ENST00000511754 PPP1R16BQ96T49 567 aa6.15□□□□□ -1.42
TNPO1-208ENST00000511754 TNKS2Q9H2K2 1166 aa6.15□□□□□ -1.42
TNPO1-208ENST00000511754 PRDM5Q9NQX1 630 aaPredicted RBP6.15□□□□□ -1.42
TNPO1-208ENST00000511754 FAM53CQ9NYF3 392 aa6.15□□□□□ -1.42
TNPO1-208ENST00000511754 SNCAIPQ9Y6H5 919 aa6.15□□□□□ -1.42
TNPO1-208ENST00000511754 ETF1P62495 437 aaKnown RBP6.14□□□□□ -1.43
TNPO1-208ENST00000511754 INPP5AQ14642 412 aa6.14□□□□□ -1.43
TNPO1-208ENST00000511754 CCDC85BQ15834 202 aaPredicted RBP6.14□□□□□ -1.43
TNPO1-208ENST00000511754 SLC23A3Q6PIS1 610 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms