RNA–Protein interactions for RNA: ENST00000511162.1

SERF1A-206, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 4

Gene SERF1A, Length 328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-206ENST00000511162 SLC4A8Q2Y0W8 1093 aa26.26■■□□□ 1.79
SERF1A-206ENST00000511162 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.26■■□□□ 1.79
SERF1A-206ENST00000511162 DDX60LQ5H9U9 1706 aaKnown RBP26.25■■□□□ 1.79
SERF1A-206ENST00000511162 TRIM6-TRIM34B2RNG4 842 aa26.25■■□□□ 1.79
SERF1A-206ENST00000511162 HLA-DOAP06340 250 aa26.25■■□□□ 1.79
SERF1A-206ENST00000511162 OPTNQ96CV9 577 aa26.25■■□□□ 1.79
SERF1A-206ENST00000511162 DCP1AQ9NPI6 582 aaPredicted RBP26.25■■□□□ 1.79
SERF1A-206ENST00000511162 HERC5Q9UII4 1024 aaKnown RBP26.25■■□□□ 1.79
SERF1A-206ENST00000511162 AK9Q5TCS8 1911 aa26.25■■□□□ 1.79
SERF1A-206ENST00000511162 M0R2C6 588 aa26.24■■□□□ 1.79
SERF1A-206ENST00000511162 ZBTB48P10074 688 aaPredicted RBP26.24■■□□□ 1.79
SERF1A-206ENST00000511162 GJA5P36382 358 aa26.24■■□□□ 1.79
SERF1A-206ENST00000511162 ZMYM1Q5SVZ6 1142 aa26.24■■□□□ 1.79
SERF1A-206ENST00000511162 NOL9Q5SY16 702 aaKnown RBP26.24■■□□□ 1.79
SERF1A-206ENST00000511162 CNKSR2Q8WXI2 1034 aa26.24■■□□□ 1.79
SERF1A-206ENST00000511162 STRBPQ96SI9 672 aaKnown RBP26.24■■□□□ 1.79
SERF1A-206ENST00000511162 SLC4A4Q9Y6R1 1079 aa26.24■■□□□ 1.79
SERF1A-206ENST00000511162 SIPA1L1O43166 1804 aa26.23■■□□□ 1.79
SERF1A-206ENST00000511162 SPDYE5A6NIY4 337 aa26.23■■□□□ 1.79
SERF1A-206ENST00000511162 GPAA1O43292 621 aa26.23■■□□□ 1.79
SERF1A-206ENST00000511162 METTL16Q86W50 562 aaKnown RBP26.23■■□□□ 1.79
SERF1A-206ENST00000511162 RILPL2Q969X0 211 aa26.23■■□□□ 1.79
SERF1A-206ENST00000511162 CCDC136Q96JN2 1154 aa26.23■■□□□ 1.79
SERF1A-206ENST00000511162 DNAJC18Q9H819 358 aa26.23■■□□□ 1.79
SERF1A-206ENST00000511162 ATP8A2Q9NTI2 1148 aa26.23■■□□□ 1.79
SERF1A-206ENST00000511162 MCM9Q9NXL9 1143 aa26.23■■□□□ 1.79
SERF1A-206ENST00000511162 CRACR2BQ8N4Y2 399 aaPredicted RBP26.22■■□□□ 1.79
SERF1A-206ENST00000511162 OTUD5Q96G74 571 aa26.22■■□□□ 1.79
SERF1A-206ENST00000511162 SEC62Q99442 399 aaKnown RBP26.22■■□□□ 1.79
SERF1A-206ENST00000511162 BEGAINQ9BUH8 593 aa26.22■■□□□ 1.79
SERF1A-206ENST00000511162 NAV1Q8NEY1 1877 aa26.21■■□□□ 1.79
SERF1A-206ENST00000511162 TTC6Q86TZ1 520 aa26.21■■□□□ 1.79
SERF1A-206ENST00000511162 TICAM2Q86XR7 235 aa26.21■■□□□ 1.79
SERF1A-206ENST00000511162 ERO1BQ86YB8 467 aa26.21■■□□□ 1.79
SERF1A-206ENST00000511162 FOXP4Q8IVH2 680 aaPredicted RBP26.21■■□□□ 1.79
SERF1A-206ENST00000511162 SCYL3Q8IZE3 742 aa26.21■■□□□ 1.79
SERF1A-206ENST00000511162 TRIM34Q9BYJ4 488 aa26.21■■□□□ 1.79
SERF1A-206ENST00000511162 EHD4Q9H223 541 aa26.21■■□□□ 1.79
SERF1A-206ENST00000511162 CTNND1O60716 968 aaKnown RBP26.2■■□□□ 1.78
SERF1A-206ENST00000511162 POLR3DP05423 398 aaPredicted RBP26.2■■□□□ 1.78
SERF1A-206ENST00000511162 TTC22Q5TAA0 569 aa26.2■■□□□ 1.78
SERF1A-206ENST00000511162 GSPT1P15170 499 aaKnown RBP26.19■■□□□ 1.78
SERF1A-206ENST00000511162 PLCD1P51178 756 aa26.19■■□□□ 1.78
SERF1A-206ENST00000511162 DDRGK1Q96HY6 314 aa26.19■■□□□ 1.78
SERF1A-206ENST00000511162 SERPINB13Q9UIV8 391 aa26.19■■□□□ 1.78
SERF1A-206ENST00000511162 MANSC4A6NHS7 340 aaPredicted RBP26.18■■□□□ 1.78
SERF1A-206ENST00000511162 CA12O43570 354 aa26.18■■□□□ 1.78
SERF1A-206ENST00000511162 CYP2D6P10635 497 aa26.18■■□□□ 1.78
SERF1A-206ENST00000511162 EVX2Q03828 476 aa26.18■■□□□ 1.78
SERF1A-206ENST00000511162 RRP1BQ14684 758 aaKnown RBP26.18■■□□□ 1.78
SERF1A-206ENST00000511162 REM2Q8IYK8 340 aaPredicted RBP26.18■■□□□ 1.78
SERF1A-206ENST00000511162 PICK1Q9NRD5 415 aa26.18■■□□□ 1.78
SERF1A-206ENST00000511162 GSG1L2A8MUP6 293 aa26.17■■□□□ 1.78
SERF1A-206ENST00000511162 GNAT2P19087 354 aa26.17■■□□□ 1.78
SERF1A-206ENST00000511162 SREBF2Q12772 1141 aa26.17■■□□□ 1.78
SERF1A-206ENST00000511162 PPIL2Q13356 520 aa26.17■■□□□ 1.78
SERF1A-206ENST00000511162 FAM227BQ96M60 508 aa26.17■■□□□ 1.78
SERF1A-206ENST00000511162 MYH1P12882 1939 aa26.17■■□□□ 1.78
SERF1A-206ENST00000511162 A0A0D9SFI3 127 aa26.16■■□□□ 1.78
SERF1A-206ENST00000511162 PTPRAP18433 802 aa26.16■■□□□ 1.78
SERF1A-206ENST00000511162 CAP2P40123 477 aa26.16■■□□□ 1.78
SERF1A-206ENST00000511162 PPATQ06203 517 aa26.16■■□□□ 1.78
SERF1A-206ENST00000511162 ERICH6BQ5W0A0 696 aa26.16■■□□□ 1.78
SERF1A-206ENST00000511162 CCDC129Q6ZRS4 1044 aa26.16■■□□□ 1.78
SERF1A-206ENST00000511162 EPB41L4AQ9HCS5 686 aaPredicted RBP26.16■■□□□ 1.78
SERF1A-206ENST00000511162 HELLSQ9NRZ9 838 aa26.16■■□□□ 1.78
SERF1A-206ENST00000511162 TSKSQ9UJT2 592 aa26.16■■□□□ 1.78
SERF1A-206ENST00000511162 USP17L12C9JPN9 530 aa26.15■■□□□ 1.78
SERF1A-206ENST00000511162 USP17L21D6R901 530 aa26.15■■□□□ 1.78
SERF1A-206ENST00000511162 IRF6O14896 467 aa26.15■■□□□ 1.78
SERF1A-206ENST00000511162 CAPN15O75808 1086 aa26.15■■□□□ 1.78
SERF1A-206ENST00000511162 SDSP20132 328 aa26.15■■□□□ 1.78
SERF1A-206ENST00000511162 GABPAQ06546 454 aa26.15■■□□□ 1.78
SERF1A-206ENST00000511162 NMIQ13287 307 aaPredicted RBP26.15■■□□□ 1.78
SERF1A-206ENST00000511162 GIMAP6Q6P9H5 292 aa26.15■■□□□ 1.78
SERF1A-206ENST00000511162 MS4A4AQ96JQ5 239 aa26.15■■□□□ 1.78
SERF1A-206ENST00000511162 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.15■■□□□ 1.78
SERF1A-206ENST00000511162 CYP2D7A0A087X1C5 515 aa26.14■■□□□ 1.78
SERF1A-206ENST00000511162 TM4SF4P48230 202 aa26.14■■□□□ 1.78
SERF1A-206ENST00000511162 CTR9Q6PD62 1173 aa26.14■■□□□ 1.78
SERF1A-206ENST00000511162 AMOTL1Q8IY63 956 aa26.14■■□□□ 1.78
SERF1A-206ENST00000511162 ARPP21Q9UBL0 812 aaPredicted RBP26.14■■□□□ 1.78
SERF1A-206ENST00000511162 DOCK1Q14185 1865 aa26.13■■□□□ 1.77
SERF1A-206ENST00000511162 GTF2A2P52657 109 aa26.13■■□□□ 1.77
SERF1A-206ENST00000511162 C12orf60Q5U649 245 aa26.13■■□□□ 1.77
SERF1A-206ENST00000511162 TATDN1Q6P1N9 297 aa26.13■■□□□ 1.77
SERF1A-206ENST00000511162 SKAP1Q86WV1 359 aa26.13■■□□□ 1.77
SERF1A-206ENST00000511162 SMIM22K7EJ46 135 aa26.12■■□□□ 1.77
SERF1A-206ENST00000511162 GDF11O95390 407 aa26.12■■□□□ 1.77
SERF1A-206ENST00000511162 APPP05067 770 aa26.12■■□□□ 1.77
SERF1A-206ENST00000511162 SHMT1P34896 483 aa26.12■■□□□ 1.77
SERF1A-206ENST00000511162 INHBEP58166 350 aa26.12■■□□□ 1.77
SERF1A-206ENST00000511162 SNAPC2Q13487 334 aa26.12■■□□□ 1.77
SERF1A-206ENST00000511162 MCMDC2Q4G0Z9 681 aa26.12■■□□□ 1.77
SERF1A-206ENST00000511162 CCDC84Q86UT8 332 aaPredicted RBP26.12■■□□□ 1.77
SERF1A-206ENST00000511162 DIAPH3Q9NSV4 1193 aa26.12■■□□□ 1.77
SERF1A-206ENST00000511162 KCNH4Q9UQ05 1017 aa26.12■■□□□ 1.77
SERF1A-206ENST00000511162 ZHX2Q9Y6X8 837 aa26.12■■□□□ 1.77
SERF1A-206ENST00000511162 LAMB1P07942 1786 aa26.12■■□□□ 1.77
SERF1A-206ENST00000511162 CASP8AP2Q9UKL3 1982 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms