RNA–Protein interactions for RNA: ENST00000510545.5

CLDND1-222, Transcript of claudin domain containing 1, human

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-222	ENST00000510545	ORC4	O43929	436 aa		18.84	■□□□□ 0.61
CLDND1-222	ENST00000510545	PC	P11498	1178 aa	Known RBP	18.84	■□□□□ 0.61
CLDND1-222	ENST00000510545	LIG1	P18858	919 aa		18.84	■□□□□ 0.61
CLDND1-222	ENST00000510545	CPLX2	Q6PUV4	134 aa	Known RBP	18.84	■□□□□ 0.61
CLDND1-222	ENST00000510545	SYNE3	Q6ZMZ3	975 aa		18.84	■□□□□ 0.61
CLDND1-222	ENST00000510545	TMTC2	Q8N394	836 aa		18.84	■□□□□ 0.61
CLDND1-222	ENST00000510545	ALG1	Q9BT22	464 aa		18.84	■□□□□ 0.61
CLDND1-222	ENST00000510545	FAM205A	Q6ZU69	1335 aa		18.84	■□□□□ 0.61
CLDND1-222	ENST00000510545	LDHC	P07864	332 aa		18.83	■□□□□ 0.61
CLDND1-222	ENST00000510545	IARS	P41252	1262 aa	Known RBP	18.83	■□□□□ 0.61
CLDND1-222	ENST00000510545	USP5	P45974	858 aa		18.83	■□□□□ 0.61
CLDND1-222	ENST00000510545	GTF2I	P78347	998 aa		18.83	■□□□□ 0.61
CLDND1-222	ENST00000510545	RTN1	Q16799	776 aa		18.83	■□□□□ 0.61
CLDND1-222	ENST00000510545	CMTR1	Q8N1G2	835 aa	Known RBP	18.83	■□□□□ 0.61
CLDND1-222	ENST00000510545	ZNF622	Q969S3	477 aa	Known RBP eCLIP	18.83	■□□□□ 0.61
CLDND1-222	ENST00000510545	CFAP45	Q9UL16	551 aa		18.83	■□□□□ 0.61
CLDND1-222	ENST00000510545	NMT2	O60551	498 aa		18.83	■□□□□ 0.6
CLDND1-222	ENST00000510545	BAG3	O95817	575 aa		18.83	■□□□□ 0.6
CLDND1-222	ENST00000510545	BTD	P43251	543 aa		18.83	■□□□□ 0.6
CLDND1-222	ENST00000510545	FAM47A	Q5JRC9	791 aa		18.83	■□□□□ 0.6
CLDND1-222	ENST00000510545	C12orf60	Q5U649	245 aa		18.83	■□□□□ 0.6
CLDND1-222	ENST00000510545	C2CD5	Q86YS7	1000 aa		18.83	■□□□□ 0.6
CLDND1-222	ENST00000510545	TGFBRAP1	Q8WUH2	860 aa		18.83	■□□□□ 0.6
CLDND1-222	ENST00000510545	NUP133	Q8WUM0	1156 aa		18.83	■□□□□ 0.6
CLDND1-222	ENST00000510545	ECM29	Q5VYK3	1845 aa		18.83	■□□□□ 0.6
CLDND1-222	ENST00000510545	GPR75-ASB3	A0A0A6YYF3	556 aa		18.82	■□□□□ 0.6
CLDND1-222	ENST00000510545	IFNAR1	P17181	557 aa		18.82	■□□□□ 0.6
CLDND1-222	ENST00000510545	GUCY1A2	P33402	732 aa		18.82	■□□□□ 0.6
CLDND1-222	ENST00000510545	DPP8	Q6V1X1	898 aa	Predicted RBP	18.82	■□□□□ 0.6
CLDND1-222	ENST00000510545	FANCB	Q8NB91	859 aa		18.82	■□□□□ 0.6
CLDND1-222	ENST00000510545	SLC26A6	Q9BXS9	759 aa		18.82	■□□□□ 0.6
CLDND1-222	ENST00000510545	COA1	Q9GZY4	146 aa		18.82	■□□□□ 0.6
CLDND1-222	ENST00000510545	RCOR1	Q9UKL0	485 aa		18.82	■□□□□ 0.6
CLDND1-222	ENST00000510545	TAOK2	Q9UL54	1235 aa		18.82	■□□□□ 0.6
CLDND1-222	ENST00000510545	POLR3D	P05423	398 aa	Predicted RBP	18.82	■□□□□ 0.6
CLDND1-222	ENST00000510545	KIF23	Q02241	960 aa	Predicted RBP	18.82	■□□□□ 0.6
CLDND1-222	ENST00000510545	DOK7	Q18PE1	504 aa		18.82	■□□□□ 0.6
CLDND1-222	ENST00000510545	NBPF11	Q86T75	865 aa		18.82	■□□□□ 0.6
CLDND1-222	ENST00000510545	TBC1D22A	Q8WUA7	517 aa		18.82	■□□□□ 0.6
CLDND1-222	ENST00000510545	DYNLL2	Q96FJ2	89 aa		18.82	■□□□□ 0.6
CLDND1-222	ENST00000510545	ZC3H12C	Q9C0D7	883 aa	Known RBP	18.82	■□□□□ 0.6
CLDND1-222	ENST00000510545	PDGFD	Q9GZP0	370 aa	Predicted RBP	18.82	■□□□□ 0.6
CLDND1-222	ENST00000510545	FMNL1	O95466	1100 aa	Predicted RBP	18.81	■□□□□ 0.6
CLDND1-222	ENST00000510545	RCAN1	P53805	252 aa		18.81	■□□□□ 0.6
CLDND1-222	ENST00000510545	KRT40	Q6A162	431 aa		18.81	■□□□□ 0.6
CLDND1-222	ENST00000510545	MAPKAPK5	Q8IW41	473 aa		18.81	■□□□□ 0.6
CLDND1-222	ENST00000510545	CCDC82	Q8N4S0	544 aa		18.81	■□□□□ 0.6
CLDND1-222	ENST00000510545	STK36	Q9NRP7	1315 aa		18.8	■□□□□ 0.6
CLDND1-222	ENST00000510545	NASP	P49321	788 aa	Predicted RBP	18.8	■□□□□ 0.6
CLDND1-222	ENST00000510545	SSRP1	Q08945	709 aa	Known RBP	18.8	■□□□□ 0.6
CLDND1-222	ENST00000510545	IFIT1B	Q5T764	474 aa	Known RBP	18.8	■□□□□ 0.6
CLDND1-222	ENST00000510545	IQCA1	Q86XH1	822 aa		18.8	■□□□□ 0.6
CLDND1-222	ENST00000510545	CERS5	Q8N5B7	392 aa		18.8	■□□□□ 0.6
CLDND1-222	ENST00000510545	FAM163A	Q96GL9	167 aa	Predicted RBP	18.8	■□□□□ 0.6
CLDND1-222	ENST00000510545	NOL10	Q9BSC4	688 aa	Known RBP	18.8	■□□□□ 0.6
CLDND1-222	ENST00000510545	MXD3	Q9BW11	206 aa		18.8	■□□□□ 0.6
CLDND1-222	ENST00000510545	RTN4	Q9NQC3	1192 aa	Known RBP	18.8	■□□□□ 0.6
CLDND1-222	ENST00000510545	STK32B	Q9NY57	414 aa		18.8	■□□□□ 0.6
CLDND1-222	ENST00000510545	GAK	O14976	1311 aa		18.8	■□□□□ 0.6
CLDND1-222	ENST00000510545	SLC3A2	P08195	630 aa	Known RBP	18.8	■□□□□ 0.6
CLDND1-222	ENST00000510545	CHRNA5	P30532	468 aa		18.8	■□□□□ 0.6
CLDND1-222	ENST00000510545	PLCD1	P51178	756 aa		18.8	■□□□□ 0.6
CLDND1-222	ENST00000510545	RHBDL3	P58872	404 aa		18.8	■□□□□ 0.6
CLDND1-222	ENST00000510545	ZNF396	Q96N95	335 aa	Predicted RBP	18.8	■□□□□ 0.6
CLDND1-222	ENST00000510545	CDK5RAP2	Q96SN8	1893 aa		18.79	■□□□□ 0.6
CLDND1-222	ENST00000510545	PDE4B	Q07343	736 aa		18.79	■□□□□ 0.6
CLDND1-222	ENST00000510545	ATL3	Q6DD88	541 aa		18.79	■□□□□ 0.6
CLDND1-222	ENST00000510545	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	18.79	■□□□□ 0.6
CLDND1-222	ENST00000510545	SAP30BP	Q9UHR5	308 aa	Known RBP	18.79	■□□□□ 0.6
CLDND1-222	ENST00000510545	DLEC1	Q9Y238	1755 aa		18.79	■□□□□ 0.6
CLDND1-222	ENST00000510545	GOLGA6L4	A6NEF3	574 aa		18.79	■□□□□ 0.6
CLDND1-222	ENST00000510545		H0YIN7	160 aa		18.79	■□□□□ 0.6
CLDND1-222	ENST00000510545	TROAP	Q12815	778 aa		18.79	■□□□□ 0.6
CLDND1-222	ENST00000510545	MYSM1	Q5VVJ2	828 aa		18.79	■□□□□ 0.6
CLDND1-222	ENST00000510545	RGS22	Q8NE09	1264 aa		18.79	■□□□□ 0.6
CLDND1-222	ENST00000510545	FBXW7	Q969H0	707 aa		18.79	■□□□□ 0.6
CLDND1-222	ENST00000510545	TSPY26P	Q9H489	355 aa		18.79	■□□□□ 0.6
CLDND1-222	ENST00000510545	NAV1	Q8NEY1	1877 aa		18.78	■□□□□ 0.6
CLDND1-222	ENST00000510545	TEX11	Q8IYF3	940 aa		18.78	■□□□□ 0.6
CLDND1-222	ENST00000510545	SLC44A5	Q8NCS7	719 aa		18.78	■□□□□ 0.6
CLDND1-222	ENST00000510545	DACT1	Q9NYF0	836 aa		18.78	■□□□□ 0.6
CLDND1-222	ENST00000510545	DAGLA	Q9Y4D2	1042 aa		18.78	■□□□□ 0.6
CLDND1-222	ENST00000510545	SLX4	Q8IY92	1834 aa		18.78	■□□□□ 0.6
CLDND1-222	ENST00000510545	ROBO3	Q96MS0	1386 aa		18.78	■□□□□ 0.6
CLDND1-222	ENST00000510545	CCDC196	A0A1B0GTZ2	297 aa		18.77	■□□□□ 0.6
CLDND1-222	ENST00000510545	STYK1	Q6J9G0	422 aa		18.77	■□□□□ 0.6
CLDND1-222	ENST00000510545	BRAP	Q7Z569	592 aa		18.77	■□□□□ 0.6
CLDND1-222	ENST00000510545	DEFB132	Q7Z7B7	95 aa		18.77	■□□□□ 0.6
CLDND1-222	ENST00000510545	RTEL1	Q9NZ71	1219 aa		18.77	■□□□□ 0.6
CLDND1-222	ENST00000510545	ZNF219	Q9P2Y4	722 aa	Predicted RBP	18.77	■□□□□ 0.6
CLDND1-222	ENST00000510545	CLIC4	Q9Y696	253 aa		18.77	■□□□□ 0.6
CLDND1-222	ENST00000510545	TSPY2	A6NKD2	308 aa		18.77	■□□□□ 0.6
CLDND1-222	ENST00000510545		F8W031	263 aa	Predicted RBP	18.77	■□□□□ 0.6
CLDND1-222	ENST00000510545	NR1I2	O75469	434 aa		18.77	■□□□□ 0.6
CLDND1-222	ENST00000510545	FUT2	Q10981	343 aa		18.77	■□□□□ 0.6
CLDND1-222	ENST00000510545	RCSD1	Q6JBY9	416 aa		18.77	■□□□□ 0.6
CLDND1-222	ENST00000510545	CATIP	Q7Z7H3	387 aa		18.77	■□□□□ 0.6
CLDND1-222	ENST00000510545	RNF214	Q8ND24	703 aa		18.77	■□□□□ 0.6
CLDND1-222	ENST00000510545	BICD2	Q8TD16	824 aa		18.77	■□□□□ 0.6
CLDND1-222	ENST00000510545	KCNQ5	Q9NR82	932 aa		18.77	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms