RNA–Protein interactions for RNA: ENST00000510108.1

NEK1-205, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 1,304 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-205ENST00000510108 ZNF213O14771 459 aa12.1□□□□□ -0.47
NEK1-205ENST00000510108 APPP05067 770 aa12.1□□□□□ -0.47
NEK1-205ENST00000510108 RPS6KB1P23443 525 aa12.1□□□□□ -0.47
NEK1-205ENST00000510108 TDO2P48775 406 aa12.1□□□□□ -0.47
NEK1-205ENST00000510108 MMP14P50281 582 aa12.1□□□□□ -0.47
NEK1-205ENST00000510108 PPP1R15BQ5SWA1 713 aa12.1□□□□□ -0.47
NEK1-205ENST00000510108 BLOC1S2Q6QNY1 142 aa12.1□□□□□ -0.47
NEK1-205ENST00000510108 FBXL16Q8N461 479 aa12.1□□□□□ -0.47
NEK1-205ENST00000510108 SDR42E1Q8WUS8 393 aa12.1□□□□□ -0.47
NEK1-205ENST00000510108 TEKT1Q969V4 418 aa12.1□□□□□ -0.47
NEK1-205ENST00000510108 ZDHHC15Q96MV8 337 aa12.1□□□□□ -0.47
NEK1-205ENST00000510108 MXD3Q9BW11 206 aa12.1□□□□□ -0.47
NEK1-205ENST00000510108 UPF3BQ9BZI7 483 aaKnown RBP12.1□□□□□ -0.47
NEK1-205ENST00000510108 ARPP21Q9UBL0 812 aaPredicted RBP12.1□□□□□ -0.47
NEK1-205ENST00000510108 CYP46A1Q9Y6A2 500 aa12.1□□□□□ -0.47
NEK1-205ENST00000510108 FZD9O00144 591 aa12.09□□□□□ -0.47
NEK1-205ENST00000510108 PSMD14O00487 310 aa12.09□□□□□ -0.47
NEK1-205ENST00000510108 FGRP09769 529 aa12.09□□□□□ -0.47
NEK1-205ENST00000510108 PCP11498 1178 aaKnown RBP12.09□□□□□ -0.47
NEK1-205ENST00000510108 CRKP46108 304 aa12.09□□□□□ -0.47
NEK1-205ENST00000510108 NT5C2P49902 561 aa12.09□□□□□ -0.47
NEK1-205ENST00000510108 PRELPP51888 382 aa12.09□□□□□ -0.47
NEK1-205ENST00000510108 RASSF7Q02833 373 aa12.09□□□□□ -0.47
NEK1-205ENST00000510108 TBC1D10CQ8IV04 446 aa12.09□□□□□ -0.47
NEK1-205ENST00000510108 MB21D2Q8IYB1 491 aaPredicted RBP12.09□□□□□ -0.47
NEK1-205ENST00000510108 AGBL3Q8NEM8 1001 aa12.09□□□□□ -0.47
NEK1-205ENST00000510108 SH3RF3Q8TEJ3 882 aaPredicted RBP12.09□□□□□ -0.47
NEK1-205ENST00000510108 STAG1Q8WVM7 1258 aa12.09□□□□□ -0.47
NEK1-205ENST00000510108 AGXT2Q9BYV1 514 aa12.09□□□□□ -0.47
NEK1-205ENST00000510108 COL2A1P02458 1487 aaPredicted RBP12.09□□□□□ -0.47
NEK1-205ENST00000510108 MYH1P12882 1939 aa12.08□□□□□ -0.48
NEK1-205ENST00000510108 EXOSC10Q01780 885 aaKnown RBP12.08□□□□□ -0.48
NEK1-205ENST00000510108 CXCL9Q07325 125 aa12.08□□□□□ -0.48
NEK1-205ENST00000510108 PPARAQ07869 468 aa12.08□□□□□ -0.48
NEK1-205ENST00000510108 APOBEC3HQ6NTF7 200 aaKnown RBP12.08□□□□□ -0.48
NEK1-205ENST00000510108 CTR9Q6PD62 1173 aa12.08□□□□□ -0.48
NEK1-205ENST00000510108 PLPP6Q8IY26 295 aa12.08□□□□□ -0.48
NEK1-205ENST00000510108 RNF181Q9P0P0 153 aa12.08□□□□□ -0.48
NEK1-205ENST00000510108 F8W031 263 aaPredicted RBP12.07□□□□□ -0.48
NEK1-205ENST00000510108 RAD17O75943 681 aa12.07□□□□□ -0.48
NEK1-205ENST00000510108 RPS12P25398 132 aaKnown RBP12.07□□□□□ -0.48
NEK1-205ENST00000510108 AK2P54819 239 aa12.07□□□□□ -0.48
NEK1-205ENST00000510108 EIF6P56537 245 aaKnown RBP12.07□□□□□ -0.48
NEK1-205ENST00000510108 HAND2P61296 217 aa12.07□□□□□ -0.48
NEK1-205ENST00000510108 COL9A3Q14050 684 aaPredicted RBP12.07□□□□□ -0.48
NEK1-205ENST00000510108 ANKRD1Q15327 319 aa12.07□□□□□ -0.48
NEK1-205ENST00000510108 AKNAD1Q5T1N1 836 aa12.07□□□□□ -0.48
NEK1-205ENST00000510108 CIAPIN1Q6FI81 312 aa12.07□□□□□ -0.48
NEK1-205ENST00000510108 DHX32Q7L7V1 743 aaKnown RBP12.07□□□□□ -0.48
NEK1-205ENST00000510108 KIAA0825Q8IV33 1275 aa12.07□□□□□ -0.48
NEK1-205ENST00000510108 TEX11Q8IYF3 940 aa12.07□□□□□ -0.48
NEK1-205ENST00000510108 MTMR14Q8NCE2 650 aa12.07□□□□□ -0.48
NEK1-205ENST00000510108 NCOA7Q8NI08 942 aa12.07□□□□□ -0.48
NEK1-205ENST00000510108 MTA3Q9BTC8 594 aa12.07□□□□□ -0.48
NEK1-205ENST00000510108 RNF41Q9H4P4 317 aaPredicted RBP12.07□□□□□ -0.48
NEK1-205ENST00000510108 CNNM2Q9H8M5 875 aa12.07□□□□□ -0.48
NEK1-205ENST00000510108 PDRG1Q9NUG6 133 aa12.07□□□□□ -0.48
NEK1-205ENST00000510108 FLT1P17948 1338 aa12.07□□□□□ -0.48
NEK1-205ENST00000510108 NEDD4P46934 1319 aa12.07□□□□□ -0.48
NEK1-205ENST00000510108 WDHD1O75717 1129 aaPredicted RBP12.06□□□□□ -0.48
NEK1-205ENST00000510108 CPA1P15085 419 aa12.06□□□□□ -0.48
NEK1-205ENST00000510108 USP5P45974 858 aa12.06□□□□□ -0.48
NEK1-205ENST00000510108 SCNN1DP51172 638 aa12.06□□□□□ -0.48
NEK1-205ENST00000510108 CUL4AQ13619 759 aa12.06□□□□□ -0.48
NEK1-205ENST00000510108 TNIP1Q15025 636 aa12.06□□□□□ -0.48
NEK1-205ENST00000510108 C9orf131Q5VYM1 1079 aa12.06□□□□□ -0.48
NEK1-205ENST00000510108 IDI2Q9BXS1 227 aa12.06□□□□□ -0.48
NEK1-205ENST00000510108 WDR70Q9NW82 654 aa12.06□□□□□ -0.48
NEK1-205ENST00000510108 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.06□□□□□ -0.48
NEK1-205ENST00000510108 TACC3Q9Y6A5 838 aa12.06□□□□□ -0.48
NEK1-205ENST00000510108 SIPA1L1O43166 1804 aa12.05□□□□□ -0.48
NEK1-205ENST00000510108 USP17L12C9JPN9 530 aa12.05□□□□□ -0.48
NEK1-205ENST00000510108 USP17L21D6R901 530 aa12.05□□□□□ -0.48
NEK1-205ENST00000510108 ORC4O43929 436 aa12.05□□□□□ -0.48
NEK1-205ENST00000510108 ANTXR2P58335 489 aa12.05□□□□□ -0.48
NEK1-205ENST00000510108 TOB2Q14106 344 aaPredicted RBP12.05□□□□□ -0.48
NEK1-205ENST00000510108 C12orf60Q5U649 245 aa12.05□□□□□ -0.48
NEK1-205ENST00000510108 CDC42EP5Q6NZY7 148 aa12.05□□□□□ -0.48
NEK1-205ENST00000510108 RALYLQ86SE5 291 aaKnown RBP12.05□□□□□ -0.48
NEK1-205ENST00000510108 TGFBRAP1Q8WUH2 860 aa12.05□□□□□ -0.48
NEK1-205ENST00000510108 ZBED3Q96IU2 234 aaPredicted RBP12.05□□□□□ -0.48
NEK1-205ENST00000510108 KRT23Q9C075 422 aa12.05□□□□□ -0.48
NEK1-205ENST00000510108 HDAC9Q9UKV0 1011 aa12.05□□□□□ -0.48
NEK1-205ENST00000510108 ZC3H4Q9UPT8 1303 aaKnown RBP12.05□□□□□ -0.48
NEK1-205ENST00000510108 MCM5P33992 734 aa12.04□□□□□ -0.48
NEK1-205ENST00000510108 EVCP57679 992 aa12.04□□□□□ -0.48
NEK1-205ENST00000510108 ZNF280AP59817 542 aaPredicted RBP12.04□□□□□ -0.48
NEK1-205ENST00000510108 CTDSPL2Q05D32 466 aa12.04□□□□□ -0.48
NEK1-205ENST00000510108 TRDNQ13061 729 aa12.04□□□□□ -0.48
NEK1-205ENST00000510108 CFAP100Q494V2 611 aa12.04□□□□□ -0.48
NEK1-205ENST00000510108 MFSD6Q6ZSS7 791 aa12.04□□□□□ -0.48
NEK1-205ENST00000510108 DPF2Q92785 391 aa12.04□□□□□ -0.48
NEK1-205ENST00000510108 TMX3Q96JJ7 454 aa12.04□□□□□ -0.48
NEK1-205ENST00000510108 ZSCAN31Q96LW9 406 aaPredicted RBP12.04□□□□□ -0.48
NEK1-205ENST00000510108 SH2B1Q9NRF2 756 aaPredicted RBP12.04□□□□□ -0.48
NEK1-205ENST00000510108 USP40Q9NVE5 1235 aa12.04□□□□□ -0.48
NEK1-205ENST00000510108 DAXXQ9UER7 740 aaPredicted RBP12.04□□□□□ -0.48
NEK1-205ENST00000510108 LIMCH1Q9UPQ0 1083 aa12.04□□□□□ -0.48
NEK1-205ENST00000510108 SLC3A2P08195 630 aaKnown RBP12.03□□□□□ -0.48
NEK1-205ENST00000510108 USP17L8P0C7I0 530 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms