RNA–Protein interactions for RNA: ENST00000509366.5

GABRB1-203, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

TSL 1 (best)

Gene GABRB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-203ENST00000509366 AATFQ9NY61 560 aaKnown RBP eCLIP17.5■□□□□ 0.39
GABRB1-203ENST00000509366 HERC5Q9UII4 1024 aaKnown RBP17.5■□□□□ 0.39
GABRB1-203ENST00000509366 MAST2Q6P0Q8 1798 aa17.49■□□□□ 0.39
GABRB1-203ENST00000509366 FAM196BA6NMK8 535 aa17.49■□□□□ 0.39
GABRB1-203ENST00000509366 CYP2E1P05181 493 aaPredicted RBP17.49■□□□□ 0.39
GABRB1-203ENST00000509366 BCRP11274 1271 aa17.49■□□□□ 0.39
GABRB1-203ENST00000509366 OSBPP22059 807 aa17.49■□□□□ 0.39
GABRB1-203ENST00000509366 PPP4CP60510 307 aa17.49■□□□□ 0.39
GABRB1-203ENST00000509366 ERC1Q8IUD2 1116 aa17.49■□□□□ 0.39
GABRB1-203ENST00000509366 PI4KBQ9UBF8 816 aa17.49■□□□□ 0.39
GABRB1-203ENST00000509366 DBNLQ9UJU6 430 aaKnown RBP17.49■□□□□ 0.39
GABRB1-203ENST00000509366 PNMA3Q9UL41 463 aa17.49■□□□□ 0.39
GABRB1-203ENST00000509366 MYPNQ86TC9 1320 aa17.48■□□□□ 0.39
GABRB1-203ENST00000509366 CEP85Q6P2H3 762 aa17.48■□□□□ 0.39
GABRB1-203ENST00000509366 TRIM34Q9BYJ4 488 aa17.48■□□□□ 0.39
GABRB1-203ENST00000509366 AGTPBP1Q9UPW5 1226 aa17.48■□□□□ 0.39
GABRB1-203ENST00000509366 PTPRFP10586 1907 aa17.47■□□□□ 0.39
GABRB1-203ENST00000509366 CTGFP29279 349 aa17.47■□□□□ 0.39
GABRB1-203ENST00000509366 GRK4P32298 578 aa17.47■□□□□ 0.39
GABRB1-203ENST00000509366 ZAP70P43403 619 aa17.47■□□□□ 0.39
GABRB1-203ENST00000509366 SPP2Q13103 211 aa17.47■□□□□ 0.39
GABRB1-203ENST00000509366 PABPC4Q13310 644 aaKnown RBP eCLIP17.47■□□□□ 0.39
GABRB1-203ENST00000509366 HSP90AB4PQ58FF6 505 aa17.47■□□□□ 0.39
GABRB1-203ENST00000509366 CCDC84Q86UT8 332 aaPredicted RBP17.47■□□□□ 0.39
GABRB1-203ENST00000509366 ZNF280CQ8ND82 737 aa17.47■□□□□ 0.39
GABRB1-203ENST00000509366 PANK1Q8TE04 598 aa17.47■□□□□ 0.39
GABRB1-203ENST00000509366 TGFBRAP1Q8WUH2 860 aa17.47■□□□□ 0.39
GABRB1-203ENST00000509366 EAF2Q96CJ1 260 aaPredicted RBP17.47■□□□□ 0.39
GABRB1-203ENST00000509366 GCC1Q96CN9 775 aa17.47■□□□□ 0.39
GABRB1-203ENST00000509366 CCDC8Q9H0W5 538 aaPredicted RBP17.47■□□□□ 0.39
GABRB1-203ENST00000509366 AS3MTQ9HBK9 375 aa17.47■□□□□ 0.39
GABRB1-203ENST00000509366 BIN2Q9UBW5 565 aaPredicted RBP17.47■□□□□ 0.39
GABRB1-203ENST00000509366 USP17L5A8MUK1 530 aa17.46■□□□□ 0.39
GABRB1-203ENST00000509366 IDH1O75874 414 aaKnown RBP17.46■□□□□ 0.39
GABRB1-203ENST00000509366 CAP2P40123 477 aa17.46■□□□□ 0.39
GABRB1-203ENST00000509366 CERS3Q8IU89 383 aa17.46■□□□□ 0.39
GABRB1-203ENST00000509366 MAPKAPK5Q8IW41 473 aa17.46■□□□□ 0.39
GABRB1-203ENST00000509366 CRACR2BQ8N4Y2 399 aaPredicted RBP17.46■□□□□ 0.39
GABRB1-203ENST00000509366 PROCA1Q8NCQ7 364 aaPredicted RBP17.46■□□□□ 0.39
GABRB1-203ENST00000509366 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.46■□□□□ 0.39
GABRB1-203ENST00000509366 PHIPQ8WWQ0 1821 aa17.46■□□□□ 0.39
GABRB1-203ENST00000509366 ASNSP08243 561 aa17.45■□□□□ 0.38
GABRB1-203ENST00000509366 FOXP4Q8IVH2 680 aaPredicted RBP17.45■□□□□ 0.38
GABRB1-203ENST00000509366 PIH1D3Q9NQM4 214 aaKnown RBP17.45■□□□□ 0.38
GABRB1-203ENST00000509366 TLR7Q9NYK1 1049 aaKnown RBP17.45■□□□□ 0.38
GABRB1-203ENST00000509366 EXOC6BQ9Y2D4 811 aa17.45■□□□□ 0.38
GABRB1-203ENST00000509366 FLT1P17948 1338 aa17.45■□□□□ 0.38
GABRB1-203ENST00000509366 TNPO2O14787 897 aaKnown RBP17.44■□□□□ 0.38
GABRB1-203ENST00000509366 HLA-DOAP06340 250 aa17.44■□□□□ 0.38
GABRB1-203ENST00000509366 CYP7A1P22680 504 aa17.44■□□□□ 0.38
GABRB1-203ENST00000509366 UBXN2AP68543 259 aa17.44■□□□□ 0.38
GABRB1-203ENST00000509366 PRKCZQ05513 592 aa17.44■□□□□ 0.38
GABRB1-203ENST00000509366 TMED8Q6PL24 325 aaPredicted RBP17.44■□□□□ 0.38
GABRB1-203ENST00000509366 ADGRA1Q86SQ6 560 aa17.44■□□□□ 0.38
GABRB1-203ENST00000509366 AACSQ86V21 672 aa17.44■□□□□ 0.38
GABRB1-203ENST00000509366 SLAIN1Q8ND83 568 aa17.44■□□□□ 0.38
GABRB1-203ENST00000509366 NKX2-3Q8TAU0 364 aa17.44■□□□□ 0.38
GABRB1-203ENST00000509366 ATAD5Q96QE3 1844 aa17.44■□□□□ 0.38
GABRB1-203ENST00000509366 MGAMO43451 1857 aa17.44■□□□□ 0.38
GABRB1-203ENST00000509366 CEP290O15078 2479 aa17.43■□□□□ 0.38
GABRB1-203ENST00000509366 GCLCP48506 637 aaPredicted RBP17.43■□□□□ 0.38
GABRB1-203ENST00000509366 HMGCS2P54868 508 aa17.43■□□□□ 0.38
GABRB1-203ENST00000509366 MAP3K12Q12852 859 aa17.43■□□□□ 0.38
GABRB1-203ENST00000509366 TREML2Q5T2D2 321 aa17.43■□□□□ 0.38
GABRB1-203ENST00000509366 GINM1Q9NU53 330 aa17.43■□□□□ 0.38
GABRB1-203ENST00000509366 HMMRO75330 724 aa17.42■□□□□ 0.38
GABRB1-203ENST00000509366 MTFR1Q15390 333 aa17.42■□□□□ 0.38
GABRB1-203ENST00000509366 ANKRD13CQ8N6S4 541 aa17.42■□□□□ 0.38
GABRB1-203ENST00000509366 MAGEB6Q8N7X4 407 aa17.42■□□□□ 0.38
GABRB1-203ENST00000509366 COA7Q96BR5 231 aa17.42■□□□□ 0.38
GABRB1-203ENST00000509366 WDR18Q9BV38 432 aa17.42■□□□□ 0.38
GABRB1-203ENST00000509366 CHMP4BQ9H444 224 aaKnown RBP17.42■□□□□ 0.38
GABRB1-203ENST00000509366 TMOD4Q9NZQ9 345 aa17.42■□□□□ 0.38
GABRB1-203ENST00000509366 SAP30BPQ9UHR5 308 aaKnown RBP17.42■□□□□ 0.38
GABRB1-203ENST00000509366 PALD1Q9ULE6 856 aa17.42■□□□□ 0.38
GABRB1-203ENST00000509366 MKI67P46013 3256 aaKnown RBP17.42■□□□□ 0.38
GABRB1-203ENST00000509366 MYO5AQ9Y4I1 1855 aaKnown RBP17.41■□□□□ 0.38
GABRB1-203ENST00000509366 ADCY3O60266 1144 aa17.41■□□□□ 0.38
GABRB1-203ENST00000509366 CCL5P13501 91 aa17.41■□□□□ 0.38
GABRB1-203ENST00000509366 USP5P45974 858 aa17.41■□□□□ 0.38
GABRB1-203ENST00000509366 FLT3LGP49771 235 aa17.41■□□□□ 0.38
GABRB1-203ENST00000509366 DYNLL1P63167 89 aaKnown RBP17.41■□□□□ 0.38
GABRB1-203ENST00000509366 RRP1BQ14684 758 aaKnown RBP17.41■□□□□ 0.38
GABRB1-203ENST00000509366 FAM110CQ1W6H9 321 aa17.41■□□□□ 0.38
GABRB1-203ENST00000509366 SH3D19Q5HYK7 790 aa17.41■□□□□ 0.38
GABRB1-203ENST00000509366 METTL16Q86W50 562 aaKnown RBP17.41■□□□□ 0.38
GABRB1-203ENST00000509366 DDX19BQ9UMR2 479 aa17.41■□□□□ 0.38
GABRB1-203ENST00000509366 BRCA2P51587 3418 aa17.41■□□□□ 0.38
GABRB1-203ENST00000509366 LOC285556D6RIA3 1793 aa17.4■□□□□ 0.38
GABRB1-203ENST00000509366 FOCADQ5VW36 1801 aa17.4■□□□□ 0.38
GABRB1-203ENST00000509366 CDK5RAP2Q96SN8 1893 aa17.4■□□□□ 0.38
GABRB1-203ENST00000509366 GJB1P08034 283 aa17.4■□□□□ 0.38
GABRB1-203ENST00000509366 IRX3P78415 501 aaPredicted RBP17.4■□□□□ 0.38
GABRB1-203ENST00000509366 MTMR2Q13614 643 aa17.4■□□□□ 0.38
GABRB1-203ENST00000509366 RPAP2Q8IXW5 612 aaPredicted RBP17.4■□□□□ 0.38
GABRB1-203ENST00000509366 CLASRPQ8N2M8 674 aaKnown RBP17.4■□□□□ 0.38
GABRB1-203ENST00000509366 MIGA1Q8NAN2 632 aa17.4■□□□□ 0.38
GABRB1-203ENST00000509366 RHPN1Q8TCX5 695 aa17.4■□□□□ 0.38
GABRB1-203ENST00000509366 KIF1BPQ96EK5 621 aa17.4■□□□□ 0.38
GABRB1-203ENST00000509366 RNF208Q9H0X6 261 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms