RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 FAM217BQ9NTX9 383 aaPredicted RBP12.63□□□□□ -0.39
SEC31A-228ENST00000509142 KCNJ14Q9UNX9 436 aa12.63□□□□□ -0.39
SEC31A-228ENST00000509142 SF3B3Q15393 1217 aaKnown RBP12.63□□□□□ -0.39
SEC31A-228ENST00000509142 CCDC24Q8N4L8 307 aa12.63□□□□□ -0.39
SEC31A-228ENST00000509142 COL16A1Q07092 1604 aaPredicted RBP12.63□□□□□ -0.39
SEC31A-228ENST00000509142 WTIPA6NIX2 430 aaPredicted RBP12.63□□□□□ -0.39
SEC31A-228ENST00000509142 BTBD18B2RXH4 712 aa12.63□□□□□ -0.39
SEC31A-228ENST00000509142 TOM1O60784 492 aa12.63□□□□□ -0.39
SEC31A-228ENST00000509142 SMC2O95347 1197 aa12.63□□□□□ -0.39
SEC31A-228ENST00000509142 DIS3L2Q8IYB7 885 aaKnown RBP12.63□□□□□ -0.39
SEC31A-228ENST00000509142 ZNF654Q8IZM8 581 aa12.63□□□□□ -0.39
SEC31A-228ENST00000509142 CELF1Q92879 486 aaKnown RBP12.63□□□□□ -0.39
SEC31A-228ENST00000509142 SLIT2O94813 1529 aa12.62□□□□□ -0.39
SEC31A-228ENST00000509142 RPS8P62241 208 aaKnown RBP12.62□□□□□ -0.39
SEC31A-228ENST00000509142 TBC1D9BQ66K14 1250 aa12.62□□□□□ -0.39
SEC31A-228ENST00000509142 FANCBQ8NB91 859 aa12.62□□□□□ -0.39
SEC31A-228ENST00000509142 NYXQ9GZU5 481 aa12.62□□□□□ -0.39
SEC31A-228ENST00000509142 AHDC1Q5TGY3 1603 aaPredicted RBP12.62□□□□□ -0.39
SEC31A-228ENST00000509142 PPP6R2O75170 966 aa12.62□□□□□ -0.39
SEC31A-228ENST00000509142 DEXIO95424 95 aa12.62□□□□□ -0.39
SEC31A-228ENST00000509142 XBP1P17861 261 aa12.62□□□□□ -0.39
SEC31A-228ENST00000509142 DYNLL1P63167 89 aaKnown RBP12.62□□□□□ -0.39
SEC31A-228ENST00000509142 ARMCX5Q6P1M9 558 aa12.62□□□□□ -0.39
SEC31A-228ENST00000509142 ADGRA1Q86SQ6 560 aa12.62□□□□□ -0.39
SEC31A-228ENST00000509142 IQCA1Q86XH1 822 aa12.62□□□□□ -0.39
SEC31A-228ENST00000509142 RGS22Q8NE09 1264 aa12.62□□□□□ -0.39
SEC31A-228ENST00000509142 ZNF592Q92610 1267 aa12.62□□□□□ -0.39
SEC31A-228ENST00000509142 CLIC6Q96NY7 704 aa12.62□□□□□ -0.39
SEC31A-228ENST00000509142 TACC3Q9Y6A5 838 aa12.62□□□□□ -0.39
SEC31A-228ENST00000509142 CEP135Q66GS9 1140 aa12.62□□□□□ -0.39
SEC31A-228ENST00000509142 NOSTRINQ8IVI9 506 aa12.62□□□□□ -0.39
SEC31A-228ENST00000509142 STK36Q9NRP7 1315 aa12.61□□□□□ -0.39
SEC31A-228ENST00000509142 GNPATO15228 680 aa12.61□□□□□ -0.39
SEC31A-228ENST00000509142 PRDM1O75626 825 aa12.61□□□□□ -0.39
SEC31A-228ENST00000509142 GUCY1A2P33402 732 aa12.61□□□□□ -0.39
SEC31A-228ENST00000509142 E4F1Q66K89 784 aaPredicted RBP12.61□□□□□ -0.39
SEC31A-228ENST00000509142 FAM84BQ96KN1 310 aaPredicted RBP12.61□□□□□ -0.39
SEC31A-228ENST00000509142 TFCP2L1Q9NZI6 479 aa12.61□□□□□ -0.39
SEC31A-228ENST00000509142 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.61□□□□□ -0.39
SEC31A-228ENST00000509142 V9GYY5 206 aaPredicted RBP12.61□□□□□ -0.39
SEC31A-228ENST00000509142 TNKSO95271 1327 aa12.61□□□□□ -0.39
SEC31A-228ENST00000509142 NLRP12P59046 1061 aa12.61□□□□□ -0.39
SEC31A-228ENST00000509142 DMTNQ08495 405 aa12.61□□□□□ -0.39
SEC31A-228ENST00000509142 TPTE2Q6XPS3 522 aa12.61□□□□□ -0.39
SEC31A-228ENST00000509142 CATIPQ7Z7H3 387 aa12.61□□□□□ -0.39
SEC31A-228ENST00000509142 CCAR2Q8N163 923 aaKnown RBP12.61□□□□□ -0.39
SEC31A-228ENST00000509142 CNNM3Q8NE01 707 aa12.61□□□□□ -0.39
SEC31A-228ENST00000509142 XPO4Q9C0E2 1151 aaKnown RBP12.61□□□□□ -0.39
SEC31A-228ENST00000509142 SRP68Q9UHB9 627 aaKnown RBP12.61□□□□□ -0.39
SEC31A-228ENST00000509142 CUTAO60888 179 aa12.61□□□□□ -0.39
SEC31A-228ENST00000509142 IFIT1BQ5T764 474 aaKnown RBP12.61□□□□□ -0.39
SEC31A-228ENST00000509142 LRRN4CLQ8ND94 238 aa12.61□□□□□ -0.39
SEC31A-228ENST00000509142 ZNF215Q9UL58 517 aaPredicted RBP12.61□□□□□ -0.39
SEC31A-228ENST00000509142 PLCH1Q4KWH8 1693 aa12.6□□□□□ -0.39
SEC31A-228ENST00000509142 MYH14Q7Z406 1995 aaKnown RBP12.6□□□□□ -0.39
SEC31A-228ENST00000509142 CYP2D7A0A087X1C5 515 aa12.6□□□□□ -0.39
SEC31A-228ENST00000509142 CRACR2BQ8N4Y2 399 aaPredicted RBP12.6□□□□□ -0.39
SEC31A-228ENST00000509142 KRI1Q8N9T8 703 aaKnown RBP12.6□□□□□ -0.39
SEC31A-228ENST00000509142 HOOK1Q9UJC3 728 aaKnown RBP12.6□□□□□ -0.39
SEC31A-228ENST00000509142 ECM29Q5VYK3 1845 aa12.6□□□□□ -0.39
SEC31A-228ENST00000509142 MMP1P03956 469 aa12.6□□□□□ -0.39
SEC31A-228ENST00000509142 HIBADHP31937 336 aaKnown RBP12.6□□□□□ -0.39
SEC31A-228ENST00000509142 PTPN21Q16825 1174 aa12.6□□□□□ -0.39
SEC31A-228ENST00000509142 OLFM4Q6UX06 510 aa12.6□□□□□ -0.39
SEC31A-228ENST00000509142 NEMFO60524 1076 aa12.6□□□□□ -0.39
SEC31A-228ENST00000509142 IGSF3O75054 1194 aa12.6□□□□□ -0.39
SEC31A-228ENST00000509142 ATP1A3P13637 1013 aa12.6□□□□□ -0.39
SEC31A-228ENST00000509142 SPECC1Q5M775 1068 aa12.6□□□□□ -0.39
SEC31A-228ENST00000509142 SHC4Q6S5L8 630 aa12.6□□□□□ -0.39
SEC31A-228ENST00000509142 MTA3Q9BTC8 594 aa12.6□□□□□ -0.39
SEC31A-228ENST00000509142 OSBPL5Q9H0X9 879 aaPredicted RBP12.6□□□□□ -0.39
SEC31A-228ENST00000509142 ZHX1Q9UKY1 873 aaPredicted RBP12.6□□□□□ -0.39
SEC31A-228ENST00000509142 KCNH3Q9ULD8 1083 aa12.6□□□□□ -0.39
SEC31A-228ENST00000509142 ZNF804BA4D1E1 1349 aa12.6□□□□□ -0.39
SEC31A-228ENST00000509142 PTPAQ15257 358 aa12.59□□□□□ -0.39
SEC31A-228ENST00000509142 RILPL1Q5EBL4 403 aa12.59□□□□□ -0.39
SEC31A-228ENST00000509142 CCDC112Q8NEF3 446 aa12.59□□□□□ -0.39
SEC31A-228ENST00000509142 TIGD1Q96MW7 591 aa12.59□□□□□ -0.39
SEC31A-228ENST00000509142 ANKRD2Q9GZV1 360 aa12.59□□□□□ -0.39
SEC31A-228ENST00000509142 IFNKQ9P0W0 207 aa12.59□□□□□ -0.39
SEC31A-228ENST00000509142 JAG2Q9Y219 1238 aa12.59□□□□□ -0.39
SEC31A-228ENST00000509142 RTCBQ9Y3I0 505 aaKnown RBP12.59□□□□□ -0.39
SEC31A-228ENST00000509142 PAXBP1Q9Y5B6 917 aa12.59□□□□□ -0.39
SEC31A-228ENST00000509142 USP17L12C9JPN9 530 aa12.59□□□□□ -0.39
SEC31A-228ENST00000509142 USP17L21D6R901 530 aa12.59□□□□□ -0.39
SEC31A-228ENST00000509142 FANCGO15287 622 aa12.59□□□□□ -0.39
SEC31A-228ENST00000509142 ZSCAN10Q96SZ4 725 aaPredicted RBP12.59□□□□□ -0.39
SEC31A-228ENST00000509142 NARFQ9UHQ1 456 aa12.59□□□□□ -0.39
SEC31A-228ENST00000509142 DPF2Q92785 391 aa12.59□□□□□ -0.39
SEC31A-228ENST00000509142 CRNKL1Q9BZJ0 848 aaKnown RBP12.59□□□□□ -0.39
SEC31A-228ENST00000509142 AATFQ9NY61 560 aaKnown RBP eCLIP12.59□□□□□ -0.39
SEC31A-228ENST00000509142 CCNL1Q9UK58 526 aaPredicted RBP12.59□□□□□ -0.39
SEC31A-228ENST00000509142 COL22A1Q8NFW1 1626 aaPredicted RBP12.58□□□□□ -0.4
SEC31A-228ENST00000509142 NRDCO43847 1150 aa12.58□□□□□ -0.4
SEC31A-228ENST00000509142 LMOD1P29536 600 aaPredicted RBP12.58□□□□□ -0.4
SEC31A-228ENST00000509142 NR5A1Q13285 461 aa12.58□□□□□ -0.4
SEC31A-228ENST00000509142 PNOCQ13519 176 aa12.58□□□□□ -0.4
SEC31A-228ENST00000509142 FOXP4Q8IVH2 680 aaPredicted RBP12.58□□□□□ -0.4
SEC31A-228ENST00000509142 MAP3K14Q99558 947 aa12.58□□□□□ -0.4
SEC31A-228ENST00000509142 CABP5Q9NP86 173 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms