RNA–Protein interactions for RNA: ENST00000509090.1

COL6A4P2-204, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 455 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-204ENST00000509090 PODXL2Q9NZ53 605 aa8.75□□□□□ -1.01
COL6A4P2-204ENST00000509090 GGT7Q9UJ14 662 aa8.75□□□□□ -1.01
COL6A4P2-204ENST00000509090 FAM170BA6NMN3 283 aa8.74□□□□□ -1.01
COL6A4P2-204ENST00000509090 CILPO75339 1184 aa8.74□□□□□ -1.01
COL6A4P2-204ENST00000509090 TGFB1P01137 390 aa8.74□□□□□ -1.01
COL6A4P2-204ENST00000509090 FANCCQ00597 558 aa8.74□□□□□ -1.01
COL6A4P2-204ENST00000509090 OGFOD3Q6PK18 319 aa8.74□□□□□ -1.01
COL6A4P2-204ENST00000509090 ZNF507Q8TCN5 953 aa8.74□□□□□ -1.01
COL6A4P2-204ENST00000509090 SSU72Q9NP77 194 aaKnown RBP8.74□□□□□ -1.01
COL6A4P2-204ENST00000509090 PRAMEF27A3QJZ7 478 aa8.73□□□□□ -1.01
COL6A4P2-204ENST00000509090 F13A1P00488 732 aa8.73□□□□□ -1.01
COL6A4P2-204ENST00000509090 ZNF76P36508 570 aa8.73□□□□□ -1.01
COL6A4P2-204ENST00000509090 CPSF6Q16630 551 aaKnown RBP eCLIP8.73□□□□□ -1.01
COL6A4P2-204ENST00000509090 KCT2Q8NC54 265 aa8.73□□□□□ -1.01
COL6A4P2-204ENST00000509090 METTL22Q9BUU2 404 aaPredicted RBP8.73□□□□□ -1.01
COL6A4P2-204ENST00000509090 ATG3Q9NT62 314 aa8.73□□□□□ -1.01
COL6A4P2-204ENST00000509090 EIF4A3P38919 411 aaKnown RBP8.72□□□□□ -1.01
COL6A4P2-204ENST00000509090 FAM160A1Q05DH4 1040 aa8.72□□□□□ -1.01
COL6A4P2-204ENST00000509090 CDK5R2Q13319 367 aa8.72□□□□□ -1.01
COL6A4P2-204ENST00000509090 FBXL19Q6PCT2 694 aa8.72□□□□□ -1.01
COL6A4P2-204ENST00000509090 GOLM1Q8NBJ4 401 aa8.72□□□□□ -1.01
COL6A4P2-204ENST00000509090 OSBPL1AQ9BXW6 950 aa8.72□□□□□ -1.01
COL6A4P2-204ENST00000509090 GREM1O60565 184 aa8.71□□□□□ -1.02
COL6A4P2-204ENST00000509090 GRK4P32298 578 aa8.71□□□□□ -1.02
COL6A4P2-204ENST00000509090 CYP27A1Q02318 531 aa8.71□□□□□ -1.02
COL6A4P2-204ENST00000509090 SNAP47Q5SQN1 464 aa8.71□□□□□ -1.02
COL6A4P2-204ENST00000509090 ZNF765Q7L2R6 523 aa8.71□□□□□ -1.02
COL6A4P2-204ENST00000509090 CDC37L1Q7L3B6 337 aa8.71□□□□□ -1.02
COL6A4P2-204ENST00000509090 FBRSQ9HAH7 460 aa8.71□□□□□ -1.02
COL6A4P2-204ENST00000509090 PIM2Q9P1W9 311 aa8.71□□□□□ -1.02
COL6A4P2-204ENST00000509090 SCAMP3O14828 347 aaKnown RBP8.7□□□□□ -1.02
COL6A4P2-204ENST00000509090 MED26O95402 600 aa8.7□□□□□ -1.02
COL6A4P2-204ENST00000509090 CAP2P40123 477 aa8.7□□□□□ -1.02
COL6A4P2-204ENST00000509090 ETF1P62495 437 aaKnown RBP8.7□□□□□ -1.02
COL6A4P2-204ENST00000509090 SLBPQ14493 270 aaKnown RBP eCLIP8.7□□□□□ -1.02
COL6A4P2-204ENST00000509090 DUSP27Q5VZP5 1158 aa8.7□□□□□ -1.02
COL6A4P2-204ENST00000509090 DIEXFQ68CQ4 756 aaKnown RBP8.7□□□□□ -1.02
COL6A4P2-204ENST00000509090 DUSP23Q9BVJ7 150 aa8.7□□□□□ -1.02
COL6A4P2-204ENST00000509090 ADAMTS1Q9UHI8 967 aa8.7□□□□□ -1.02
COL6A4P2-204ENST00000509090 LEMD3Q9Y2U8 911 aa8.7□□□□□ -1.02
COL6A4P2-204ENST00000509090 COBLO75128 1261 aa8.69□□□□□ -1.02
COL6A4P2-204ENST00000509090 FAM87AP0C7U9 286 aa8.69□□□□□ -1.02
COL6A4P2-204ENST00000509090 CD97P48960 835 aa8.69□□□□□ -1.02
COL6A4P2-204ENST00000509090 MPP2Q14168 576 aa8.69□□□□□ -1.02
COL6A4P2-204ENST00000509090 NKG7Q16617 165 aa8.69□□□□□ -1.02
COL6A4P2-204ENST00000509090 INTS5Q6P9B9 1019 aaKnown RBP8.69□□□□□ -1.02
COL6A4P2-204ENST00000509090 FAM196AQ6ZSG2 479 aa8.69□□□□□ -1.02
COL6A4P2-204ENST00000509090 HID1Q8IV36 788 aa8.69□□□□□ -1.02
COL6A4P2-204ENST00000509090 ZNF296Q8WUU4 475 aaPredicted RBP8.69□□□□□ -1.02
COL6A4P2-204ENST00000509090 RNF34Q969K3 372 aa8.69□□□□□ -1.02
COL6A4P2-204ENST00000509090 ROBO2Q9HCK4 1378 aa8.69□□□□□ -1.02
COL6A4P2-204ENST00000509090 LEFTY1O75610 366 aa8.68□□□□□ -1.02
COL6A4P2-204ENST00000509090 BPNT1O95861 308 aa8.68□□□□□ -1.02
COL6A4P2-204ENST00000509090 FOSL1P15407 271 aa8.68□□□□□ -1.02
COL6A4P2-204ENST00000509090 LRP8Q14114 963 aa8.68□□□□□ -1.02
COL6A4P2-204ENST00000509090 CYP27C1Q4G0S4 372 aa8.68□□□□□ -1.02
COL6A4P2-204ENST00000509090 FBXO27Q8NI29 283 aa8.68□□□□□ -1.02
COL6A4P2-204ENST00000509090 SUPT16HQ9Y5B9 1047 aaKnown RBP8.68□□□□□ -1.02
COL6A4P2-204ENST00000509090 HYAL3O43820 417 aaPredicted RBP8.67□□□□□ -1.02
COL6A4P2-204ENST00000509090 LRIG2O94898 1065 aa8.67□□□□□ -1.02
COL6A4P2-204ENST00000509090 HOXA10P31260 410 aaPredicted RBP8.67□□□□□ -1.02
COL6A4P2-204ENST00000509090 SSTR4P31391 388 aa8.67□□□□□ -1.02
COL6A4P2-204ENST00000509090 PDE4BQ07343 736 aa8.67□□□□□ -1.02
COL6A4P2-204ENST00000509090 ARTNQ5T4W7 220 aa8.67□□□□□ -1.02
COL6A4P2-204ENST00000509090 ARMCX6Q7L4S7 300 aa8.67□□□□□ -1.02
COL6A4P2-204ENST00000509090 FAM214BQ7L5A3 538 aa8.67□□□□□ -1.02
COL6A4P2-204ENST00000509090 METTL16Q86W50 562 aaKnown RBP8.67□□□□□ -1.02
COL6A4P2-204ENST00000509090 LRRC3Q9BY71 257 aa8.67□□□□□ -1.02
COL6A4P2-204ENST00000509090 FOXQ1Q9C009 403 aa8.67□□□□□ -1.02
COL6A4P2-204ENST00000509090 PRR36Q9H6K5 1346 aa8.67□□□□□ -1.02
COL6A4P2-204ENST00000509090 POLR3KQ9Y2Y1 108 aaPredicted RBP8.67□□□□□ -1.02
COL6A4P2-204ENST00000509090 KIAA1324LA8MWY0 1029 aaPredicted RBP8.66□□□□□ -1.02
COL6A4P2-204ENST00000509090 CYP26A1O43174 497 aa8.66□□□□□ -1.02
COL6A4P2-204ENST00000509090 PGRP06401 933 aa8.66□□□□□ -1.02
COL6A4P2-204ENST00000509090 GRIK1P39086 918 aa8.66□□□□□ -1.02
COL6A4P2-204ENST00000509090 REC114Q7Z4M0 266 aa8.66□□□□□ -1.02
COL6A4P2-204ENST00000509090 MRPL41Q8IXM3 137 aaKnown RBP8.66□□□□□ -1.02
COL6A4P2-204ENST00000509090 TOP6BLQ8N6T0 577 aa8.66□□□□□ -1.02
COL6A4P2-204ENST00000509090 ZNF428Q96B54 188 aa8.66□□□□□ -1.02
COL6A4P2-204ENST00000509090 PRDM10Q9NQV6 1147 aa8.66□□□□□ -1.02
COL6A4P2-204ENST00000509090 TJP2Q9UDY2 1190 aa8.66□□□□□ -1.02
COL6A4P2-204ENST00000509090 ADAM30Q9UKF2 790 aa8.66□□□□□ -1.02
COL6A4P2-204ENST00000509090 CORINQ9Y5Q5 1042 aa8.66□□□□□ -1.02
COL6A4P2-204ENST00000509090 CST3P01034 146 aaPredicted RBP8.65□□□□□ -1.02
COL6A4P2-204ENST00000509090 ZNF394Q53GI3 561 aa8.65□□□□□ -1.02
COL6A4P2-204ENST00000509090 TMEM201Q5SNT2 666 aa8.65□□□□□ -1.02
COL6A4P2-204ENST00000509090 USP48Q86UV5 1035 aa8.65□□□□□ -1.02
COL6A4P2-204ENST00000509090 MCATQ8IVS2 390 aaKnown RBP8.65□□□□□ -1.02
COL6A4P2-204ENST00000509090 ACSF2Q96CM8 615 aaPredicted RBP8.65□□□□□ -1.02
COL6A4P2-204ENST00000509090 DDX41Q9UJV9 622 aaKnown RBP8.65□□□□□ -1.02
COL6A4P2-204ENST00000509090 SCO2A0A1W2PP80 73 aa8.64□□□□□ -1.03
COL6A4P2-204ENST00000509090 TLR3O15455 904 aaKnown RBP8.64□□□□□ -1.03
COL6A4P2-204ENST00000509090 CRKP46108 304 aa8.64□□□□□ -1.03
COL6A4P2-204ENST00000509090 RACK1P63244 317 aaKnown RBP8.64□□□□□ -1.03
COL6A4P2-204ENST00000509090 HDLBPQ00341 1268 aaKnown RBP8.64□□□□□ -1.03
COL6A4P2-204ENST00000509090 MSMPQ1L6U9 139 aa8.64□□□□□ -1.03
COL6A4P2-204ENST00000509090 SLC6A19Q695T7 634 aa8.64□□□□□ -1.03
COL6A4P2-204ENST00000509090 Q8N3U1 123 aa8.64□□□□□ -1.03
COL6A4P2-204ENST00000509090 MFSD2AQ8NA29 543 aa8.64□□□□□ -1.03
COL6A4P2-204ENST00000509090 TMEM87BQ96K49 555 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms