RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 LRRCC1Q9C099 1032 aa10.56□□□□□ -0.72
SNCA-211ENST00000508895 PALD1Q9ULE6 856 aa10.56□□□□□ -0.72
SNCA-211ENST00000508895 CSADQ9Y600 493 aa10.56□□□□□ -0.72
SNCA-211ENST00000508895 FLT1P17948 1338 aa10.56□□□□□ -0.72
SNCA-211ENST00000508895 NPM3O75607 178 aaKnown RBP10.55□□□□□ -0.72
SNCA-211ENST00000508895 LDHCP07864 332 aa10.55□□□□□ -0.72
SNCA-211ENST00000508895 PDE6AP16499 860 aa10.55□□□□□ -0.72
SNCA-211ENST00000508895 PTPRAP18433 802 aa10.55□□□□□ -0.72
SNCA-211ENST00000508895 GSTO1P78417 241 aa10.55□□□□□ -0.72
SNCA-211ENST00000508895 SMC5Q8IY18 1101 aa10.55□□□□□ -0.72
SNCA-211ENST00000508895 REM2Q8IYK8 340 aaPredicted RBP10.55□□□□□ -0.72
SNCA-211ENST00000508895 CLASRPQ8N2M8 674 aaKnown RBP10.55□□□□□ -0.72
SNCA-211ENST00000508895 ARHGAP39Q9C0H5 1083 aa10.55□□□□□ -0.72
SNCA-211ENST00000508895 KCNH4Q9UQ05 1017 aa10.55□□□□□ -0.72
SNCA-211ENST00000508895 SALL3Q9BXA9 1300 aa10.55□□□□□ -0.72
SNCA-211ENST00000508895 COL2A1P02458 1487 aaPredicted RBP10.55□□□□□ -0.72
SNCA-211ENST00000508895 LAMA4Q16363 1823 aa10.54□□□□□ -0.72
SNCA-211ENST00000508895 PRKAB2O43741 272 aa10.54□□□□□ -0.72
SNCA-211ENST00000508895 ECM2O94769 699 aaPredicted RBP10.54□□□□□ -0.72
SNCA-211ENST00000508895 IFIT2P09913 472 aaKnown RBP10.54□□□□□ -0.72
SNCA-211ENST00000508895 CYP2D6P10635 497 aa10.54□□□□□ -0.72
SNCA-211ENST00000508895 ATP5JP18859 108 aa10.54□□□□□ -0.72
SNCA-211ENST00000508895 PRPF38BQ5VTL8 546 aaKnown RBP10.54□□□□□ -0.72
SNCA-211ENST00000508895 SLF2Q8IX21 1173 aa10.54□□□□□ -0.72
SNCA-211ENST00000508895 SCYL3Q8IZE3 742 aa10.54□□□□□ -0.72
SNCA-211ENST00000508895 CD99L2Q8TCZ2 262 aa10.54□□□□□ -0.72
SNCA-211ENST00000508895 GCC1Q96CN9 775 aa10.54□□□□□ -0.72
SNCA-211ENST00000508895 AFG3L2Q9Y4W6 797 aa10.54□□□□□ -0.72
SNCA-211ENST00000508895 ADGRA2Q96PE1 1338 aa10.54□□□□□ -0.72
SNCA-211ENST00000508895 ZNF532Q9HCE3 1301 aa10.54□□□□□ -0.72
SNCA-211ENST00000508895 LOC285556D6RIA3 1793 aa10.53□□□□□ -0.72
SNCA-211ENST00000508895 TBC1D12O60347 775 aa10.53□□□□□ -0.72
SNCA-211ENST00000508895 FKTNO75072 461 aa10.53□□□□□ -0.72
SNCA-211ENST00000508895 MAP4K4O95819 1239 aaPredicted RBP10.53□□□□□ -0.72
SNCA-211ENST00000508895 GTF2A2P52657 109 aa10.53□□□□□ -0.72
SNCA-211ENST00000508895 INHBEP58166 350 aa10.53□□□□□ -0.72
SNCA-211ENST00000508895 PPATQ06203 517 aa10.53□□□□□ -0.72
SNCA-211ENST00000508895 CTU1Q7Z7A3 348 aaKnown RBP10.53□□□□□ -0.72
SNCA-211ENST00000508895 METTL16Q86W50 562 aaKnown RBP10.53□□□□□ -0.72
SNCA-211ENST00000508895 LCORLQ8N3X6 602 aa10.53□□□□□ -0.72
SNCA-211ENST00000508895 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.53□□□□□ -0.72
SNCA-211ENST00000508895 HAUS7Q99871 368 aa10.53□□□□□ -0.72
SNCA-211ENST00000508895 RWDD1Q9H446 243 aaPredicted RBP10.53□□□□□ -0.72
SNCA-211ENST00000508895 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.53□□□□□ -0.72
SNCA-211ENST00000508895 ZHX2Q9Y6X8 837 aa10.53□□□□□ -0.72
SNCA-211ENST00000508895 CUL9Q8IWT3 2517 aa10.53□□□□□ -0.72
SNCA-211ENST00000508895 KIAA0100Q14667 2235 aaKnown RBP10.53□□□□□ -0.72
SNCA-211ENST00000508895 MGAMO43451 1857 aa10.53□□□□□ -0.72
SNCA-211ENST00000508895 CENPFP49454 3210 aa10.52□□□□□ -0.73
SNCA-211ENST00000508895 PEX10O60683 326 aa10.52□□□□□ -0.73
SNCA-211ENST00000508895 GDF11O95390 407 aa10.52□□□□□ -0.73
SNCA-211ENST00000508895 NEFLP07196 543 aa10.52□□□□□ -0.73
SNCA-211ENST00000508895 CETPP11597 493 aa10.52□□□□□ -0.73
SNCA-211ENST00000508895 ADD2P35612 726 aa10.52□□□□□ -0.73
SNCA-211ENST00000508895 PLCD1P51178 756 aa10.52□□□□□ -0.73
SNCA-211ENST00000508895 SNAPC2Q13487 334 aa10.52□□□□□ -0.73
SNCA-211ENST00000508895 TAF1CQ15572 869 aaPredicted RBP10.52□□□□□ -0.73
SNCA-211ENST00000508895 NOM1Q5C9Z4 860 aaKnown RBP10.52□□□□□ -0.73
SNCA-211ENST00000508895 TREML2Q5T2D2 321 aa10.52□□□□□ -0.73
SNCA-211ENST00000508895 SLC9C2Q5TAH2 1124 aa10.52□□□□□ -0.73
SNCA-211ENST00000508895 OTOP1Q7RTM1 612 aa10.52□□□□□ -0.73
SNCA-211ENST00000508895 POTEDQ86YR6 584 aa10.52□□□□□ -0.73
SNCA-211ENST00000508895 SDR42E1Q8WUS8 393 aa10.52□□□□□ -0.73
SNCA-211ENST00000508895 ARMT1Q9H993 441 aa10.52□□□□□ -0.73
SNCA-211ENST00000508895 PAG1Q9NWQ8 432 aa10.52□□□□□ -0.73
SNCA-211ENST00000508895 CPA4Q9UI42 421 aa10.52□□□□□ -0.73
SNCA-211ENST00000508895 CYP2D7A0A087X1C5 515 aa10.51□□□□□ -0.73
SNCA-211ENST00000508895 CYP2C8P10632 490 aa10.51□□□□□ -0.73
SNCA-211ENST00000508895 CAP2P40123 477 aa10.51□□□□□ -0.73
SNCA-211ENST00000508895 POTEEQ6S8J3 1075 aa10.51□□□□□ -0.73
SNCA-211ENST00000508895 PI4K2BQ8TCG2 481 aa10.51□□□□□ -0.73
SNCA-211ENST00000508895 HOOK2Q96ED9 719 aa10.51□□□□□ -0.73
SNCA-211ENST00000508895 HPS5Q9UPZ3 1129 aa10.51□□□□□ -0.73
SNCA-211ENST00000508895 A0A0G2JLL6 359 aaPredicted RBP10.5□□□□□ -0.73
SNCA-211ENST00000508895 MAGEB6P1A0A0J9YX57 407 aa10.5□□□□□ -0.73
SNCA-211ENST00000508895 TRIM75PA6NK02 468 aa10.5□□□□□ -0.73
SNCA-211ENST00000508895 PDHXO00330 501 aa10.5□□□□□ -0.73
SNCA-211ENST00000508895 CTNND1O60716 968 aaKnown RBP10.5□□□□□ -0.73
SNCA-211ENST00000508895 BAG3O95817 575 aa10.5□□□□□ -0.73
SNCA-211ENST00000508895 ALDH1A1P00352 501 aa10.5□□□□□ -0.73
SNCA-211ENST00000508895 GUCY1A2P33402 732 aa10.5□□□□□ -0.73
SNCA-211ENST00000508895 MAP3K12Q12852 859 aa10.5□□□□□ -0.73
SNCA-211ENST00000508895 ANKRD45Q5TZF3 282 aa10.5□□□□□ -0.73
SNCA-211ENST00000508895 B4GALNT3Q6L9W6 998 aa10.5□□□□□ -0.73
SNCA-211ENST00000508895 C17orf99Q6UX52 265 aa10.5□□□□□ -0.73
SNCA-211ENST00000508895 PRRT2Q7Z6L0 340 aaPredicted RBP10.5□□□□□ -0.73
SNCA-211ENST00000508895 SLC44A5Q8NCS7 719 aa10.5□□□□□ -0.73
SNCA-211ENST00000508895 LNPKQ9C0E8 428 aa10.5□□□□□ -0.73
SNCA-211ENST00000508895 PUS7LQ9H0K6 701 aaKnown RBP10.5□□□□□ -0.73
SNCA-211ENST00000508895 PI4KBQ9UBF8 816 aa10.5□□□□□ -0.73
SNCA-211ENST00000508895 TRIM17Q9Y577 477 aa10.5□□□□□ -0.73
SNCA-211ENST00000508895 BRCA2P51587 3418 aa10.49□□□□□ -0.73
SNCA-211ENST00000508895 CXCL11O14625 94 aa10.49□□□□□ -0.73
SNCA-211ENST00000508895 TLR2O60603 784 aa10.49□□□□□ -0.73
SNCA-211ENST00000508895 MBD4O95243 580 aa10.49□□□□□ -0.73
SNCA-211ENST00000508895 MX1P20591 662 aa10.49□□□□□ -0.73
SNCA-211ENST00000508895 SHMT1P34896 483 aa10.49□□□□□ -0.73
SNCA-211ENST00000508895 SOX10P56693 466 aa10.49□□□□□ -0.73
SNCA-211ENST00000508895 SP3Q02447 781 aa10.49□□□□□ -0.73
SNCA-211ENST00000508895 NUCB1Q02818 461 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms