RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 SNCAIPQ9Y6H5 919 aa12.77□□□□□ -0.37
POLR2J3-213ENST00000508848 HLA-DOAP06340 250 aa12.76□□□□□ -0.37
POLR2J3-213ENST00000508848 CENPBP07199 599 aaPredicted RBP12.76□□□□□ -0.37
POLR2J3-213ENST00000508848 CAP2P40123 477 aa12.76□□□□□ -0.37
POLR2J3-213ENST00000508848 USP5P45974 858 aa12.76□□□□□ -0.37
POLR2J3-213ENST00000508848 CTCFP49711 727 aaPredicted RBP12.76□□□□□ -0.37
POLR2J3-213ENST00000508848 GTF2A2P52657 109 aa12.76□□□□□ -0.37
POLR2J3-213ENST00000508848 PICALMQ13492 652 aa12.76□□□□□ -0.37
POLR2J3-213ENST00000508848 PRKG1Q13976 671 aa12.76□□□□□ -0.37
POLR2J3-213ENST00000508848 MIGA2Q7L4E1 593 aa12.76□□□□□ -0.37
POLR2J3-213ENST00000508848 MIGA1Q8NAN2 632 aa12.76□□□□□ -0.37
POLR2J3-213ENST00000508848 AIDAQ96BJ3 306 aa12.76□□□□□ -0.37
POLR2J3-213ENST00000508848 CLMNQ96JQ2 1002 aa12.76□□□□□ -0.37
POLR2J3-213ENST00000508848 MS4A4AQ96JQ5 239 aa12.76□□□□□ -0.37
POLR2J3-213ENST00000508848 STRBPQ96SI9 672 aaKnown RBP12.76□□□□□ -0.37
POLR2J3-213ENST00000508848 DCP1AQ9NPI6 582 aaPredicted RBP12.76□□□□□ -0.37
POLR2J3-213ENST00000508848 KCNH4Q9UQ05 1017 aa12.76□□□□□ -0.37
POLR2J3-213ENST00000508848 SIPA1L1O43166 1804 aa12.76□□□□□ -0.37
POLR2J3-213ENST00000508848 HSPA1AP0DMV8 641 aaKnown RBP12.75□□□□□ -0.37
POLR2J3-213ENST00000508848 HSPA1BP0DMV9 641 aaKnown RBP12.75□□□□□ -0.37
POLR2J3-213ENST00000508848 GABPAQ06546 454 aa12.75□□□□□ -0.37
POLR2J3-213ENST00000508848 DOCK1Q14185 1865 aa12.75□□□□□ -0.37
POLR2J3-213ENST00000508848 SBK1Q52WX2 424 aa12.75□□□□□ -0.37
POLR2J3-213ENST00000508848 DDX60LQ5H9U9 1706 aaKnown RBP12.75□□□□□ -0.37
POLR2J3-213ENST00000508848 ZMYM1Q5SVZ6 1142 aa12.75□□□□□ -0.37
POLR2J3-213ENST00000508848 OTUD7BQ6GQQ9 843 aa12.75□□□□□ -0.37
POLR2J3-213ENST00000508848 TATDN1Q6P1N9 297 aa12.75□□□□□ -0.37
POLR2J3-213ENST00000508848 MAPKAPK5Q8IW41 473 aa12.75□□□□□ -0.37
POLR2J3-213ENST00000508848 SCYL3Q8IZE3 742 aa12.75□□□□□ -0.37
POLR2J3-213ENST00000508848 PHIPQ8WWQ0 1821 aa12.75□□□□□ -0.37
POLR2J3-213ENST00000508848 ZKSCAN4Q969J2 545 aaPredicted RBP12.75□□□□□ -0.37
POLR2J3-213ENST00000508848 OPTNQ96CV9 577 aa12.75□□□□□ -0.37
POLR2J3-213ENST00000508848 DDRGK1Q96HY6 314 aa12.75□□□□□ -0.37
POLR2J3-213ENST00000508848 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.75□□□□□ -0.37
POLR2J3-213ENST00000508848 SERPINB13Q9UIV8 391 aa12.75□□□□□ -0.37
POLR2J3-213ENST00000508848 PALD1Q9ULE6 856 aa12.75□□□□□ -0.37
POLR2J3-213ENST00000508848 BAZ2AQ9UIF9 1905 aaKnown RBP12.74□□□□□ -0.37
POLR2J3-213ENST00000508848 ASNSP08243 561 aa12.74□□□□□ -0.37
POLR2J3-213ENST00000508848 CETPP11597 493 aa12.74□□□□□ -0.37
POLR2J3-213ENST00000508848 INPP5BP32019 993 aa12.74□□□□□ -0.37
POLR2J3-213ENST00000508848 B4GALNT3Q6L9W6 998 aa12.74□□□□□ -0.37
POLR2J3-213ENST00000508848 CENPQQ7L2Z9 268 aaPredicted RBP12.74□□□□□ -0.37
POLR2J3-213ENST00000508848 LCORLQ8N3X6 602 aa12.74□□□□□ -0.37
POLR2J3-213ENST00000508848 OSBP2Q969R2 916 aa12.74□□□□□ -0.37
POLR2J3-213ENST00000508848 ZIC5Q96T25 663 aa12.74□□□□□ -0.37
POLR2J3-213ENST00000508848 PUS7LQ9H0K6 701 aaKnown RBP12.74□□□□□ -0.37
POLR2J3-213ENST00000508848 HELLSQ9NRZ9 838 aa12.74□□□□□ -0.37
POLR2J3-213ENST00000508848 FZD1Q9UP38 647 aa12.74□□□□□ -0.37
POLR2J3-213ENST00000508848 PTPRFP10586 1907 aa12.74□□□□□ -0.37
POLR2J3-213ENST00000508848 ATAD5Q96QE3 1844 aa12.74□□□□□ -0.37
POLR2J3-213ENST00000508848 PATL2C9JE40 543 aaKnown RBP12.73□□□□□ -0.37
POLR2J3-213ENST00000508848 HIP1O00291 1037 aa12.73□□□□□ -0.37
POLR2J3-213ENST00000508848 MBD4O95243 580 aa12.73□□□□□ -0.37
POLR2J3-213ENST00000508848 PTPRAP18433 802 aa12.73□□□□□ -0.37
POLR2J3-213ENST00000508848 DSG3P32926 999 aa12.73□□□□□ -0.37
POLR2J3-213ENST00000508848 GJA5P36382 358 aa12.73□□□□□ -0.37
POLR2J3-213ENST00000508848 IRX6P78412 446 aaPredicted RBP12.73□□□□□ -0.37
POLR2J3-213ENST00000508848 SNAPC2Q13487 334 aa12.73□□□□□ -0.37
POLR2J3-213ENST00000508848 C12orf60Q5U649 245 aa12.73□□□□□ -0.37
POLR2J3-213ENST00000508848 TSHZ3Q63HK5 1081 aa12.73□□□□□ -0.37
POLR2J3-213ENST00000508848 FSD1Q9BTV5 496 aa12.73□□□□□ -0.37
POLR2J3-213ENST00000508848 WDR18Q9BV38 432 aa12.73□□□□□ -0.37
POLR2J3-213ENST00000508848 BCL11AQ9H165 835 aa12.73□□□□□ -0.37
POLR2J3-213ENST00000508848 ELP3Q9H9T3 547 aa12.73□□□□□ -0.37
POLR2J3-213ENST00000508848 PICK1Q9NRD5 415 aa12.73□□□□□ -0.37
POLR2J3-213ENST00000508848 RNF186Q9NXI6 227 aa12.73□□□□□ -0.37
POLR2J3-213ENST00000508848 SWAP70Q9UH65 585 aa12.73□□□□□ -0.37
POLR2J3-213ENST00000508848 AFG3L2Q9Y4W6 797 aa12.73□□□□□ -0.37
POLR2J3-213ENST00000508848 NAV1Q8NEY1 1877 aa12.72□□□□□ -0.37
POLR2J3-213ENST00000508848 GSG1L2A8MUP6 293 aa12.72□□□□□ -0.37
POLR2J3-213ENST00000508848 IRF6O14896 467 aa12.72□□□□□ -0.37
POLR2J3-213ENST00000508848 FOXN1O15353 648 aa12.72□□□□□ -0.37
POLR2J3-213ENST00000508848 ALX1Q15699 326 aa12.72□□□□□ -0.37
POLR2J3-213ENST00000508848 FASTKD5Q7L8L6 764 aaKnown RBP12.72□□□□□ -0.37
POLR2J3-213ENST00000508848 IFNL1Q8IU54 200 aa12.72□□□□□ -0.37
POLR2J3-213ENST00000508848 AMOTL1Q8IY63 956 aa12.72□□□□□ -0.37
POLR2J3-213ENST00000508848 CCDC17Q96LX7 622 aa12.72□□□□□ -0.37
POLR2J3-213ENST00000508848 ARMT1Q9H993 441 aa12.72□□□□□ -0.37
POLR2J3-213ENST00000508848 MCM9Q9NXL9 1143 aa12.72□□□□□ -0.37
POLR2J3-213ENST00000508848 SLC45A1Q9Y2W3 748 aa12.72□□□□□ -0.37
POLR2J3-213ENST00000508848 MYH8P13535 1937 aa12.72□□□□□ -0.37
POLR2J3-213ENST00000508848 USP17L5A8MUK1 530 aa12.71□□□□□ -0.37
POLR2J3-213ENST00000508848 GPAA1O43292 621 aa12.71□□□□□ -0.37
POLR2J3-213ENST00000508848 POLR3DP05423 398 aaPredicted RBP12.71□□□□□ -0.37
POLR2J3-213ENST00000508848 PLCD1P51178 756 aa12.71□□□□□ -0.37
POLR2J3-213ENST00000508848 GRM1Q13255 1194 aa12.71□□□□□ -0.37
POLR2J3-213ENST00000508848 CRACR2BQ8N4Y2 399 aaPredicted RBP12.71□□□□□ -0.37
POLR2J3-213ENST00000508848 DNAJC18Q9H819 358 aa12.71□□□□□ -0.37
POLR2J3-213ENST00000508848 ARPP21Q9UBL0 812 aaPredicted RBP12.71□□□□□ -0.37
POLR2J3-213ENST00000508848 SLC4A4Q9Y6R1 1079 aa12.71□□□□□ -0.37
POLR2J3-213ENST00000508848 C19orf81C9J6K1 198 aa12.7□□□□□ -0.38
POLR2J3-213ENST00000508848 USP17L12C9JPN9 530 aa12.7□□□□□ -0.38
POLR2J3-213ENST00000508848 USP17L21D6R901 530 aa12.7□□□□□ -0.38
POLR2J3-213ENST00000508848 HSPA8P11142 646 aaKnown RBP12.7□□□□□ -0.38
POLR2J3-213ENST00000508848 PDE4AP27815 886 aa12.7□□□□□ -0.38
POLR2J3-213ENST00000508848 NT5C2P49902 561 aa12.7□□□□□ -0.38
POLR2J3-213ENST00000508848 MFAP1P55081 439 aaKnown RBP12.7□□□□□ -0.38
POLR2J3-213ENST00000508848 MCMDC2Q4G0Z9 681 aa12.7□□□□□ -0.38
POLR2J3-213ENST00000508848 SH3D19Q5HYK7 790 aa12.7□□□□□ -0.38
POLR2J3-213ENST00000508848 ANKRD23Q86SG2 305 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms