RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 GRM1Q13255 1194 aa10.95□□□□□ -0.66
NUP54-207ENST00000508583 MCMDC2Q4G0Z9 681 aa10.95□□□□□ -0.66
NUP54-207ENST00000508583 MOB2Q70IA6 237 aa10.95□□□□□ -0.66
NUP54-207ENST00000508583 MIGA2Q7L4E1 593 aa10.95□□□□□ -0.66
NUP54-207ENST00000508583 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.95□□□□□ -0.66
NUP54-207ENST00000508583 RUFY2Q8WXA3 655 aa10.95□□□□□ -0.66
NUP54-207ENST00000508583 STRBPQ96SI9 672 aaKnown RBP10.95□□□□□ -0.66
NUP54-207ENST00000508583 PUS7LQ9H0K6 701 aaKnown RBP10.95□□□□□ -0.66
NUP54-207ENST00000508583 EHD4Q9H223 541 aa10.95□□□□□ -0.66
NUP54-207ENST00000508583 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.95□□□□□ -0.66
NUP54-207ENST00000508583 ZNF287Q9HBT7 754 aa10.95□□□□□ -0.66
NUP54-207ENST00000508583 DCP1AQ9NPI6 582 aaPredicted RBP10.95□□□□□ -0.66
NUP54-207ENST00000508583 PICK1Q9NRD5 415 aa10.95□□□□□ -0.66
NUP54-207ENST00000508583 GINM1Q9NU53 330 aa10.95□□□□□ -0.66
NUP54-207ENST00000508583 MCM9Q9NXL9 1143 aa10.95□□□□□ -0.66
NUP54-207ENST00000508583 ARPP21Q9UBL0 812 aaPredicted RBP10.95□□□□□ -0.66
NUP54-207ENST00000508583 SERPINB13Q9UIV8 391 aa10.95□□□□□ -0.66
NUP54-207ENST00000508583 CTNND1O60716 968 aaKnown RBP10.94□□□□□ -0.66
NUP54-207ENST00000508583 APPP05067 770 aa10.94□□□□□ -0.66
NUP54-207ENST00000508583 SLC10A3P09131 477 aa10.94□□□□□ -0.66
NUP54-207ENST00000508583 SDSP20132 328 aa10.94□□□□□ -0.66
NUP54-207ENST00000508583 MAP2K1Q02750 393 aaPredicted RBP10.94□□□□□ -0.66
NUP54-207ENST00000508583 CYP4F22Q6NT55 531 aa10.94□□□□□ -0.66
NUP54-207ENST00000508583 CASC1Q6TDU7 716 aa10.94□□□□□ -0.66
NUP54-207ENST00000508583 ERO1BQ86YB8 467 aa10.94□□□□□ -0.66
NUP54-207ENST00000508583 ZFPM1Q8IX07 1006 aa10.94□□□□□ -0.66
NUP54-207ENST00000508583 SDR42E1Q8WUS8 393 aa10.94□□□□□ -0.66
NUP54-207ENST00000508583 OSBP2Q969R2 916 aa10.94□□□□□ -0.66
NUP54-207ENST00000508583 BEGAINQ9BUH8 593 aa10.94□□□□□ -0.66
NUP54-207ENST00000508583 TBC1D2Q9BYX2 928 aa10.94□□□□□ -0.66
NUP54-207ENST00000508583 SAP30BPQ9UHR5 308 aaKnown RBP10.94□□□□□ -0.66
NUP54-207ENST00000508583 ZNF112Q9UJU3 913 aa10.94□□□□□ -0.66
NUP54-207ENST00000508583 PALD1Q9ULE6 856 aa10.94□□□□□ -0.66
NUP54-207ENST00000508583 RAD50Q92878 1312 aa10.93□□□□□ -0.66
NUP54-207ENST00000508583 PATL2C9JE40 543 aaKnown RBP10.93□□□□□ -0.66
NUP54-207ENST00000508583 SLC3A2P08195 630 aaKnown RBP10.93□□□□□ -0.66
NUP54-207ENST00000508583 TDO2P48775 406 aa10.93□□□□□ -0.66
NUP54-207ENST00000508583 VEGFBP49765 207 aa10.93□□□□□ -0.66
NUP54-207ENST00000508583 INHBEP58166 350 aa10.93□□□□□ -0.66
NUP54-207ENST00000508583 SREBF2Q12772 1141 aa10.93□□□□□ -0.66
NUP54-207ENST00000508583 VGLL4Q14135 290 aa10.93□□□□□ -0.66
NUP54-207ENST00000508583 BMP2KLQ5H9B9 411 aa10.93□□□□□ -0.66
NUP54-207ENST00000508583 NOL9Q5SY16 702 aaKnown RBP10.93□□□□□ -0.66
NUP54-207ENST00000508583 SH3BP5LQ7L8J4 393 aa10.93□□□□□ -0.66
NUP54-207ENST00000508583 METTL16Q86W50 562 aaKnown RBP10.93□□□□□ -0.66
NUP54-207ENST00000508583 RASAL3Q86YV0 1011 aa10.93□□□□□ -0.66
NUP54-207ENST00000508583 SWAP70Q9UH65 585 aa10.93□□□□□ -0.66
NUP54-207ENST00000508583 DDX60LQ5H9U9 1706 aaKnown RBP10.92□□□□□ -0.66
NUP54-207ENST00000508583 M0R2C6 588 aa10.92□□□□□ -0.66
NUP54-207ENST00000508583 ASNSP08243 561 aa10.92□□□□□ -0.66
NUP54-207ENST00000508583 PPATQ06203 517 aa10.92□□□□□ -0.66
NUP54-207ENST00000508583 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.92□□□□□ -0.66
NUP54-207ENST00000508583 SCYL3Q8IZE3 742 aa10.92□□□□□ -0.66
NUP54-207ENST00000508583 JMYQ8N9B5 988 aa10.92□□□□□ -0.66
NUP54-207ENST00000508583 WNK4Q96J92 1243 aa10.92□□□□□ -0.66
NUP54-207ENST00000508583 NAPBQ9H115 298 aa10.92□□□□□ -0.66
NUP54-207ENST00000508583 PCNTO95613 3336 aa10.92□□□□□ -0.66
NUP54-207ENST00000508583 CCDC171Q6TFL3 1326 aa10.91□□□□□ -0.66
NUP54-207ENST00000508583 MANSC4A6NHS7 340 aaPredicted RBP10.91□□□□□ -0.66
NUP54-207ENST00000508583 SPDYE5A6NIY4 337 aa10.91□□□□□ -0.66
NUP54-207ENST00000508583 PHF20L1A8MW92 1017 aa10.91□□□□□ -0.66
NUP54-207ENST00000508583 USP17L12C9JPN9 530 aa10.91□□□□□ -0.66
NUP54-207ENST00000508583 USP17L21D6R901 530 aa10.91□□□□□ -0.66
NUP54-207ENST00000508583 CA12O43570 354 aa10.91□□□□□ -0.66
NUP54-207ENST00000508583 GSPT1P15170 499 aaKnown RBP10.91□□□□□ -0.66
NUP54-207ENST00000508583 GTF2A2P52657 109 aa10.91□□□□□ -0.66
NUP54-207ENST00000508583 NMIQ13287 307 aaPredicted RBP10.91□□□□□ -0.66
NUP54-207ENST00000508583 PPIL2Q13356 520 aa10.91□□□□□ -0.66
NUP54-207ENST00000508583 SLFNL1Q499Z3 407 aa10.91□□□□□ -0.66
NUP54-207ENST00000508583 SBK1Q52WX2 424 aa10.91□□□□□ -0.66
NUP54-207ENST00000508583 SPRYD7Q5W111 196 aa10.91□□□□□ -0.66
NUP54-207ENST00000508583 OTUD7BQ6GQQ9 843 aa10.91□□□□□ -0.66
NUP54-207ENST00000508583 CWC27Q6UX04 472 aaKnown RBP10.91□□□□□ -0.66
NUP54-207ENST00000508583 PIP4P2Q8N4L2 257 aa10.91□□□□□ -0.66
NUP54-207ENST00000508583 OPTNQ96CV9 577 aa10.91□□□□□ -0.66
NUP54-207ENST00000508583 CLMNQ96JQ2 1002 aa10.91□□□□□ -0.66
NUP54-207ENST00000508583 ELP3Q9H9T3 547 aa10.91□□□□□ -0.66
NUP54-207ENST00000508583 AS3MTQ9HBK9 375 aa10.91□□□□□ -0.66
NUP54-207ENST00000508583 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.91□□□□□ -0.66
NUP54-207ENST00000508583 ZMYM6O95789 1325 aa10.9□□□□□ -0.66
NUP54-207ENST00000508583 BAZ2AQ9UIF9 1905 aaKnown RBP10.9□□□□□ -0.66
NUP54-207ENST00000508583 DOCK1Q14185 1865 aa10.9□□□□□ -0.66
NUP54-207ENST00000508583 A0A0D9SFI3 127 aa10.9□□□□□ -0.66
NUP54-207ENST00000508583 GSG1L2A8MUP6 293 aa10.9□□□□□ -0.66
NUP54-207ENST00000508583 FAM155AB1AL88 458 aaPredicted RBP10.9□□□□□ -0.66
NUP54-207ENST00000508583 PRKAB2O43741 272 aa10.9□□□□□ -0.66
NUP54-207ENST00000508583 AOC2O75106 756 aa10.9□□□□□ -0.66
NUP54-207ENST00000508583 ALDH1A1P00352 501 aa10.9□□□□□ -0.66
NUP54-207ENST00000508583 CHGBP05060 677 aa10.9□□□□□ -0.66
NUP54-207ENST00000508583 INPP5BP32019 993 aa10.9□□□□□ -0.66
NUP54-207ENST00000508583 CAP2P40123 477 aa10.9□□□□□ -0.66
NUP54-207ENST00000508583 SNAPC2Q13487 334 aa10.9□□□□□ -0.66
NUP54-207ENST00000508583 CERKLQ49MI3 558 aaPredicted RBP10.9□□□□□ -0.66
NUP54-207ENST00000508583 C12orf60Q5U649 245 aa10.9□□□□□ -0.66
NUP54-207ENST00000508583 ZKSCAN4Q969J2 545 aaPredicted RBP10.9□□□□□ -0.66
NUP54-207ENST00000508583 OTUD5Q96G74 571 aa10.9□□□□□ -0.66
NUP54-207ENST00000508583 CCDC17Q96LX7 622 aa10.9□□□□□ -0.66
NUP54-207ENST00000508583 FAM227BQ96M60 508 aa10.9□□□□□ -0.66
NUP54-207ENST00000508583 SEC62Q99442 399 aaKnown RBP10.9□□□□□ -0.66
NUP54-207ENST00000508583 CABP5Q9NP86 173 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms