RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 NEFMP07197 916 aa6.11□□□□□ -1.43
SMARCA5-202ENST00000508573 ZNF16P17020 682 aaPredicted RBP6.11□□□□□ -1.43
SMARCA5-202ENST00000508573 STK35Q8TDR2 534 aa6.11□□□□□ -1.43
SMARCA5-202ENST00000508573 PRDM16Q9HAZ2 1276 aa6.11□□□□□ -1.43
SMARCA5-202ENST00000508573 PRDM7Q9NQW5 492 aa6.11□□□□□ -1.43
SMARCA5-202ENST00000508573 NLRP2Q9NX02 1062 aa6.11□□□□□ -1.43
SMARCA5-202ENST00000508573 AKAP2Q9Y2D5 859 aa6.11□□□□□ -1.43
SMARCA5-202ENST00000508573 GPR182O15218 404 aa6.1□□□□□ -1.43
SMARCA5-202ENST00000508573 ARNTP27540 789 aa6.1□□□□□ -1.43
SMARCA5-202ENST00000508573 ZC3H12AQ5D1E8 599 aaKnown RBP6.1□□□□□ -1.43
SMARCA5-202ENST00000508573 ANGEL2Q5VTE6 544 aaKnown RBP6.1□□□□□ -1.43
SMARCA5-202ENST00000508573 MAP1SQ66K74 1059 aaPredicted RBP6.1□□□□□ -1.43
SMARCA5-202ENST00000508573 SLC23A3Q6PIS1 610 aa6.1□□□□□ -1.43
SMARCA5-202ENST00000508573 DNAJC14Q6Y2X3 702 aaPredicted RBP6.1□□□□□ -1.43
SMARCA5-202ENST00000508573 PDZD3Q86UT5 571 aa6.1□□□□□ -1.43
SMARCA5-202ENST00000508573 SULF2Q8IWU5 870 aa6.1□□□□□ -1.43
SMARCA5-202ENST00000508573 RNF214Q8ND24 703 aa6.1□□□□□ -1.43
SMARCA5-202ENST00000508573 HEXIM2Q96MH2 286 aaKnown RBP6.1□□□□□ -1.43
SMARCA5-202ENST00000508573 GNEQ9Y223 722 aaKnown RBP6.1□□□□□ -1.43
SMARCA5-202ENST00000508573 CSADQ9Y600 493 aa6.1□□□□□ -1.43
SMARCA5-202ENST00000508573 FBLN7Q53RD9 439 aa6.09□□□□□ -1.43
SMARCA5-202ENST00000508573 PI16Q6UXB8 463 aa6.09□□□□□ -1.43
SMARCA5-202ENST00000508573 ZNF526Q8TF50 670 aaPredicted RBP6.09□□□□□ -1.43
SMARCA5-202ENST00000508573 HIRIP3Q9BW71 556 aaPredicted RBP6.09□□□□□ -1.43
SMARCA5-202ENST00000508573 BCO2Q9BYV7 579 aa6.09□□□□□ -1.43
SMARCA5-202ENST00000508573 CBX8Q9HC52 389 aa6.09□□□□□ -1.43
SMARCA5-202ENST00000508573 SNX11Q9Y5W9 270 aa6.09□□□□□ -1.43
SMARCA5-202ENST00000508573 LRRC10BA6NIK2 292 aa6.08□□□□□ -1.44
SMARCA5-202ENST00000508573 MARCH6O60337 910 aa6.08□□□□□ -1.44
SMARCA5-202ENST00000508573 IGHA2P01877 340 aa6.08□□□□□ -1.44
SMARCA5-202ENST00000508573 IRX6P78412 446 aaPredicted RBP6.08□□□□□ -1.44
SMARCA5-202ENST00000508573 IKZF1Q13422 519 aa6.08□□□□□ -1.44
SMARCA5-202ENST00000508573 GIMAP6Q6P9H5 292 aa6.08□□□□□ -1.44
SMARCA5-202ENST00000508573 MPRIPQ6WCQ1 1025 aa6.08□□□□□ -1.44
SMARCA5-202ENST00000508573 ZNF662Q6ZS27 426 aa6.08□□□□□ -1.44
SMARCA5-202ENST00000508573 NOL8Q76FK4 1167 aaKnown RBP6.08□□□□□ -1.44
SMARCA5-202ENST00000508573 FAM214BQ7L5A3 538 aa6.08□□□□□ -1.44
SMARCA5-202ENST00000508573 GPBAR1Q8TDU6 330 aa6.08□□□□□ -1.44
SMARCA5-202ENST00000508573 ACSBG1Q96GR2 724 aa6.08□□□□□ -1.44
SMARCA5-202ENST00000508573 FAM84AQ96KN4 292 aa6.08□□□□□ -1.44
SMARCA5-202ENST00000508573 DMRTB1Q96MA1 342 aa6.08□□□□□ -1.44
SMARCA5-202ENST00000508573 EMILIN2Q9BXX0 1053 aa6.08□□□□□ -1.44
SMARCA5-202ENST00000508573 PICK1Q9NRD5 415 aa6.08□□□□□ -1.44
SMARCA5-202ENST00000508573 PPP1R1BQ9UD71 204 aaPredicted RBP6.08□□□□□ -1.44
SMARCA5-202ENST00000508573 GTF2IRD1Q9UHL9 959 aa6.08□□□□□ -1.44
SMARCA5-202ENST00000508573 LOC102724159A0A0B4J2E5 919 aa6.07□□□□□ -1.44
SMARCA5-202ENST00000508573 XRCC5P13010 732 aaKnown RBP6.07□□□□□ -1.44
SMARCA5-202ENST00000508573 NME2P22392 152 aa6.07□□□□□ -1.44
SMARCA5-202ENST00000508573 ERVK-24P63145 666 aa6.07□□□□□ -1.44
SMARCA5-202ENST00000508573 ZP2Q05996 745 aa6.07□□□□□ -1.44
SMARCA5-202ENST00000508573 PWP2Q15269 919 aaKnown RBP6.07□□□□□ -1.44
SMARCA5-202ENST00000508573 KCNMB1Q16558 191 aa6.07□□□□□ -1.44
SMARCA5-202ENST00000508573 MLANAQ16655 118 aa6.07□□□□□ -1.44
SMARCA5-202ENST00000508573 PPM1JQ5JR12 505 aa6.07□□□□□ -1.44
SMARCA5-202ENST00000508573 ASB11Q8WXH4 323 aa6.07□□□□□ -1.44
SMARCA5-202ENST00000508573 UBXN4Q92575 508 aa6.07□□□□□ -1.44
SMARCA5-202ENST00000508573 TNKS2Q9H2K2 1166 aa6.07□□□□□ -1.44
SMARCA5-202ENST00000508573 DCDC2CA8MYV0 355 aa6.06□□□□□ -1.44
SMARCA5-202ENST00000508573 MESP2Q0VG99 397 aa6.06□□□□□ -1.44
SMARCA5-202ENST00000508573 NXPE4Q6UWF7 544 aa6.06□□□□□ -1.44
SMARCA5-202ENST00000508573 C12orf40Q86WS4 652 aa6.06□□□□□ -1.44
SMARCA5-202ENST00000508573 PRDM10Q9NQV6 1147 aa6.06□□□□□ -1.44
SMARCA5-202ENST00000508573 FAM53CQ9NYF3 392 aa6.06□□□□□ -1.44
SMARCA5-202ENST00000508573 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.06□□□□□ -1.44
SMARCA5-202ENST00000508573 CDC37L1Q7L3B6 337 aa6.05□□□□□ -1.44
SMARCA5-202ENST00000508573 ZSWIM9Q86XI8 627 aa6.05□□□□□ -1.44
SMARCA5-202ENST00000508573 GRIN3AQ8TCU5 1115 aa6.05□□□□□ -1.44
SMARCA5-202ENST00000508573 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
SMARCA5-202ENST00000508573 RIPOR2Q9Y4F9 1068 aa6.05□□□□□ -1.44
SMARCA5-202ENST00000508573 ZNF503-AS2A6NEH8 195 aa6.04□□□□□ -1.44
SMARCA5-202ENST00000508573 IGF2BP3O00425 579 aaKnown RBP eCLIP6.04□□□□□ -1.44
SMARCA5-202ENST00000508573 ERCC3P19447 782 aa6.04□□□□□ -1.44
SMARCA5-202ENST00000508573 ZC3H6P61129 1189 aaKnown RBP6.04□□□□□ -1.44
SMARCA5-202ENST00000508573 PLCB3Q01970 1234 aa6.04□□□□□ -1.44
SMARCA5-202ENST00000508573 NKPD1Q17RQ9 610 aa6.04□□□□□ -1.44
SMARCA5-202ENST00000508573 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.04□□□□□ -1.44
SMARCA5-202ENST00000508573 LCE4AQ5TA78 99 aa6.04□□□□□ -1.44
SMARCA5-202ENST00000508573 SPOCD1Q6ZMY3 1216 aa6.04□□□□□ -1.44
SMARCA5-202ENST00000508573 FLAD1Q8NFF5 587 aa6.04□□□□□ -1.44
SMARCA5-202ENST00000508573 ALKBH8Q96BT7 664 aaKnown RBP6.04□□□□□ -1.44
SMARCA5-202ENST00000508573 LIN37Q96GY3 246 aaPredicted RBP6.04□□□□□ -1.44
SMARCA5-202ENST00000508573 RBCK1Q9BYM8 510 aa6.04□□□□□ -1.44
SMARCA5-202ENST00000508573 PLEKHD1A6NEE1 506 aa6.03□□□□□ -1.44
SMARCA5-202ENST00000508573 GNAT3A8MTJ3 354 aa6.03□□□□□ -1.44
SMARCA5-202ENST00000508573 BMP6P22004 513 aa6.03□□□□□ -1.44
SMARCA5-202ENST00000508573 AFMP43652 599 aa6.03□□□□□ -1.44
SMARCA5-202ENST00000508573 ZNF252P-AS1Q0IIN9 211 aa6.03□□□□□ -1.44
SMARCA5-202ENST00000508573 NAALADL2Q58DX5 795 aa6.03□□□□□ -1.44
SMARCA5-202ENST00000508573 FYB2Q5VWT5 728 aa6.03□□□□□ -1.44
SMARCA5-202ENST00000508573 SPACA3Q8IXA5 215 aa6.03□□□□□ -1.44
SMARCA5-202ENST00000508573 BCL2L13Q9BXK5 485 aa6.03□□□□□ -1.44
SMARCA5-202ENST00000508573 CTNND2Q9UQB3 1225 aa6.03□□□□□ -1.44
SMARCA5-202ENST00000508573 RAP1GAPP47736 663 aa6.02□□□□□ -1.45
SMARCA5-202ENST00000508573 TPTE2Q6XPS3 522 aa6.02□□□□□ -1.45
SMARCA5-202ENST00000508573 TMC7Q7Z402 723 aa6.02□□□□□ -1.45
SMARCA5-202ENST00000508573 UBE3DQ7Z6J8 389 aa6.02□□□□□ -1.45
SMARCA5-202ENST00000508573 CCER1Q8TC90 406 aaPredicted RBP6.02□□□□□ -1.45
SMARCA5-202ENST00000508573 GIPC2Q8TF65 315 aa6.02□□□□□ -1.45
SMARCA5-202ENST00000508573 NECAB3Q96P71 396 aaPredicted RBP6.02□□□□□ -1.45
SMARCA5-202ENST00000508573 SAMM50Q9Y512 469 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms