RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 MORC3Q14149 939 aa15.36■□□□□ 0.05
SNCAIP-209ENST00000508017 CCDC12Q8WUD4 166 aaPredicted RBP15.36■□□□□ 0.05
SNCAIP-209ENST00000508017 RAI14Q9P0K7 980 aa15.36■□□□□ 0.05
SNCAIP-209ENST00000508017 WWC3Q9ULE0 1092 aa15.36■□□□□ 0.05
SNCAIP-209ENST00000508017 CTDSPL2Q05D32 466 aa15.36■□□□□ 0.05
SNCAIP-209ENST00000508017 SSRP1Q08945 709 aaKnown RBP15.36■□□□□ 0.05
SNCAIP-209ENST00000508017 TCIRG1Q13488 830 aa15.36■□□□□ 0.05
SNCAIP-209ENST00000508017 USP49Q70CQ1 688 aa15.36■□□□□ 0.05
SNCAIP-209ENST00000508017 PROSER2Q86WR7 435 aaPredicted RBP15.36■□□□□ 0.05
SNCAIP-209ENST00000508017 ZBTB9Q96C00 473 aa15.36■□□□□ 0.05
SNCAIP-209ENST00000508017 TMEM87BQ96K49 555 aa15.36■□□□□ 0.05
SNCAIP-209ENST00000508017 FUT8Q9BYC5 575 aa15.36■□□□□ 0.05
SNCAIP-209ENST00000508017 ARFGAP3Q9NP61 516 aa15.36■□□□□ 0.05
SNCAIP-209ENST00000508017 ABCC12Q96J65 1359 aa15.36■□□□□ 0.05
SNCAIP-209ENST00000508017 TULP2O00295 520 aa15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 TEX33O43247 280 aa15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 SARSP49591 514 aaKnown RBP15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 DIS3L2Q8IYB7 885 aaKnown RBP15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 CMTR1Q8N1G2 835 aaKnown RBP15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 CCDC82Q8N4S0 544 aa15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 ENOX1Q8TC92 643 aaKnown RBP15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 LZTFL1Q9NQ48 299 aa15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 PCDHB6Q9Y5E3 794 aa15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 CHD4Q14839 1912 aa15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 ATRNO75882 1429 aa15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 ATP2B1P20020 1258 aa15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 NR1I3Q14994 352 aa15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 NT5DC1Q5TFE4 455 aa15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 SGMS1Q86VZ5 419 aa15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 MLKLQ8NB16 471 aa15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 RABGGTAQ92696 567 aa15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 GOLGA1Q92805 767 aa15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 ZSWIM5Q9P217 1185 aa15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 FBXO3Q9UK99 471 aa15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 RIPOR2Q9Y4F9 1068 aa15.35■□□□□ 0.05
SNCAIP-209ENST00000508017 ZNF142P52746 1687 aaPredicted RBP15.34■□□□□ 0.05
SNCAIP-209ENST00000508017 IFIT3O14879 490 aaKnown RBP15.34■□□□□ 0.05
SNCAIP-209ENST00000508017 FMNL1O95466 1100 aaPredicted RBP15.34■□□□□ 0.05
SNCAIP-209ENST00000508017 MMP1P03956 469 aa15.34■□□□□ 0.05
SNCAIP-209ENST00000508017 PDE6AP16499 860 aa15.34■□□□□ 0.05
SNCAIP-209ENST00000508017 PTPREP23469 700 aa15.34■□□□□ 0.05
SNCAIP-209ENST00000508017 NR5A1Q13285 461 aa15.34■□□□□ 0.05
SNCAIP-209ENST00000508017 HOOK1Q9UJC3 728 aaKnown RBP15.34■□□□□ 0.05
SNCAIP-209ENST00000508017 SLC12A7Q9Y666 1083 aa15.34■□□□□ 0.05
SNCAIP-209ENST00000508017 H3BQF6 201 aa15.34■□□□□ 0.05
SNCAIP-209ENST00000508017 CSF1RP07333 972 aa15.34■□□□□ 0.05
SNCAIP-209ENST00000508017 RAD9BQ6WBX8 426 aa15.34■□□□□ 0.05
SNCAIP-209ENST00000508017 LDHAL6AQ6ZMR3 332 aa15.34■□□□□ 0.05
SNCAIP-209ENST00000508017 ZKSCAN3Q9BRR0 538 aa15.34■□□□□ 0.05
SNCAIP-209ENST00000508017 GREM2Q9H772 168 aa15.34■□□□□ 0.05
SNCAIP-209ENST00000508017 EPB41L4AQ9HCS5 686 aaPredicted RBP15.34■□□□□ 0.05
SNCAIP-209ENST00000508017 ACTN4O43707 911 aaKnown RBP15.33■□□□□ 0.04
SNCAIP-209ENST00000508017 PHKA1P46020 1223 aa15.33■□□□□ 0.04
SNCAIP-209ENST00000508017 LONRF2Q1L5Z9 754 aa15.33■□□□□ 0.04
SNCAIP-209ENST00000508017 NUTM2AQ8IVF1 878 aaPredicted RBP15.33■□□□□ 0.04
SNCAIP-209ENST00000508017 ELOA2Q8IYF1 753 aaPredicted RBP15.33■□□□□ 0.04
SNCAIP-209ENST00000508017 CPLX3Q8WVH0 158 aa15.33■□□□□ 0.04
SNCAIP-209ENST00000508017 STRBPQ96SI9 672 aaKnown RBP15.33■□□□□ 0.04
SNCAIP-209ENST00000508017 PUF60Q9UHX1 559 aaKnown RBP15.33■□□□□ 0.04
SNCAIP-209ENST00000508017 STK36Q9NRP7 1315 aa15.33■□□□□ 0.04
SNCAIP-209ENST00000508017 A0A1B0GTH6 734 aa15.33■□□□□ 0.04
SNCAIP-209ENST00000508017 TCRBV5S4A2TA0A5A2 114 aa15.33■□□□□ 0.04
SNCAIP-209ENST00000508017 PCCAP05165 728 aaPredicted RBP15.33■□□□□ 0.04
SNCAIP-209ENST00000508017 CASP1P29466 404 aa15.33■□□□□ 0.04
SNCAIP-209ENST00000508017 TXLNAP40222 546 aa15.33■□□□□ 0.04
SNCAIP-209ENST00000508017 UBE3CQ15386 1083 aa15.33■□□□□ 0.04
SNCAIP-209ENST00000508017 APTXQ7Z2E3 356 aaKnown RBP15.33■□□□□ 0.04
SNCAIP-209ENST00000508017 OXER1Q8TDS5 423 aa15.33■□□□□ 0.04
SNCAIP-209ENST00000508017 LRP6O75581 1613 aa15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 AKR1B15C9JRZ8 316 aaPredicted RBP15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 TFRCP02786 760 aaKnown RBP15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 CCDC175P0C221 793 aa15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 ITGA6P23229 1130 aa15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 PLCD1P51178 756 aa15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 STX17P56962 302 aa15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 RAD51AP2Q09MP3 1159 aa15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 TXLNBQ8N3L3 684 aa15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 DACH1Q9UI36 760 aa15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 PAPPAQ13219 1627 aa15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 IFNAR1P17181 557 aa15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 GPTP24298 496 aa15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 RBL2Q08999 1139 aa15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 KLHL10Q6JEL2 608 aa15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 TTLL11Q8NHH1 800 aa15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 ZCRB1Q8TBF4 217 aaKnown RBP15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 AIDAQ96BJ3 306 aa15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 CSRNP2Q9H175 543 aa15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 CNNM1Q9NRU3 951 aa15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 ADGRG1Q9Y653 693 aa15.32■□□□□ 0.04
SNCAIP-209ENST00000508017 MAP3K15Q6ZN16 1313 aa15.31■□□□□ 0.04
SNCAIP-209ENST00000508017 CD44P16070 742 aaKnown RBP15.31■□□□□ 0.04
SNCAIP-209ENST00000508017 LIFRP42702 1097 aa15.31■□□□□ 0.04
SNCAIP-209ENST00000508017 CHMP4BP1P59074 171 aa15.31■□□□□ 0.04
SNCAIP-209ENST00000508017 SAFBQ15424 915 aaKnown RBP eCLIP15.31■□□□□ 0.04
SNCAIP-209ENST00000508017 PLA2G12BQ9BX93 195 aa15.31■□□□□ 0.04
SNCAIP-209ENST00000508017 ANKZF1Q9H8Y5 726 aa15.31■□□□□ 0.04
SNCAIP-209ENST00000508017 A0A087X0B3 334 aa15.31■□□□□ 0.04
SNCAIP-209ENST00000508017 FAM205CA6NFA0 338 aa15.31■□□□□ 0.04
SNCAIP-209ENST00000508017 TTF1Q15361 905 aaPredicted RBP15.31■□□□□ 0.04
SNCAIP-209ENST00000508017 RRP12Q5JTH9 1297 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms