RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 ZSCAN12O43309 604 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 PDCP20941 246 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 SFPQP23246 707 aaKnown RBP eCLIP7□□□□□ -1.29
KDM3B-204ENST00000507996 RFC4P35249 363 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 TBC1D8BQ0IIM8 1120 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 PLCB4Q15147 1175 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 TXNRD1Q16881 649 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 ZC3H12AQ5D1E8 599 aaKnown RBP7□□□□□ -1.29
KDM3B-204ENST00000507996 ANKRD18AQ8IVF6 992 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 CCDC24Q8N4L8 307 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 CTCFLQ8NI51 663 aaPredicted RBP7□□□□□ -1.29
KDM3B-204ENST00000507996 UPF3BQ9BZI7 483 aaKnown RBP7□□□□□ -1.29
KDM3B-204ENST00000507996 GBP3Q9H0R5 595 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 ANO10Q9NW15 660 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 ARFGEF2Q9Y6D5 1785 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 VWA3AA6NCI4 1184 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 NR1I2O75469 434 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 URI1O94763 535 aaPredicted RBP7□□□□□ -1.29
KDM3B-204ENST00000507996 CAMTA2O94983 1202 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 ST3GAL1Q11201 340 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 TRAPPC3LQ5T215 181 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 NLRP10Q86W26 655 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 ARHGEF1Q92888 912 aaKnown RBP7□□□□□ -1.29
KDM3B-204ENST00000507996 ZKSCAN4Q969J2 545 aaPredicted RBP7□□□□□ -1.29
KDM3B-204ENST00000507996 ISCA1Q9BUE6 129 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 ALDH8A1Q9H2A2 487 aaPredicted RBP7□□□□□ -1.29
KDM3B-204ENST00000507996 ANKZF1Q9H8Y5 726 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 ANO2Q9NQ90 1003 aa7□□□□□ -1.29
KDM3B-204ENST00000507996 AFDNP55196 1824 aaKnown RBP7□□□□□ -1.29
KDM3B-204ENST00000507996 MYH14Q7Z406 1995 aaKnown RBP7□□□□□ -1.29
KDM3B-204ENST00000507996 RPS6KA4O75676 772 aa6.99□□□□□ -1.29
KDM3B-204ENST00000507996 SUSD4Q5VX71 490 aa6.99□□□□□ -1.29
KDM3B-204ENST00000507996 SH3GL3Q99963 347 aa6.99□□□□□ -1.29
KDM3B-204ENST00000507996 TRIM6Q9C030 488 aaPredicted RBP6.99□□□□□ -1.29
KDM3B-204ENST00000507996 FAM169AQ9Y6X4 670 aa6.99□□□□□ -1.29
KDM3B-204ENST00000507996 NHSQ6T4R5 1651 aa6.99□□□□□ -1.29
KDM3B-204ENST00000507996 SBF2Q86WG5 1849 aa6.99□□□□□ -1.29
KDM3B-204ENST00000507996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.99□□□□□ -1.29
KDM3B-204ENST00000507996 ERVV-1B6SEH8 477 aa6.99□□□□□ -1.29
KDM3B-204ENST00000507996 H7C1W4 665 aa6.99□□□□□ -1.29
KDM3B-204ENST00000507996 G3BP1Q13283 466 aaKnown RBP eCLIP6.99□□□□□ -1.295e-9■■□□□ 13.1
KDM3B-204ENST00000507996 TSHZ3Q63HK5 1081 aa6.99□□□□□ -1.29
KDM3B-204ENST00000507996 NOL8Q76FK4 1167 aaKnown RBP6.99□□□□□ -1.29
KDM3B-204ENST00000507996 SRGAP1Q7Z6B7 1085 aa6.99□□□□□ -1.29
KDM3B-204ENST00000507996 YTHDF3Q7Z739 585 aaKnown RBP6.99□□□□□ -1.29
KDM3B-204ENST00000507996 SSH3Q8TE77 659 aa6.99□□□□□ -1.29
KDM3B-204ENST00000507996 AFAP1L1Q8TED9 768 aa6.99□□□□□ -1.29
KDM3B-204ENST00000507996 PGBD1Q96JS3 809 aa6.99□□□□□ -1.29
KDM3B-204ENST00000507996 CALR3Q96L12 384 aaKnown RBP6.99□□□□□ -1.29
KDM3B-204ENST00000507996 SPATA32Q96LK8 384 aa6.99□□□□□ -1.29
KDM3B-204ENST00000507996 LRRCC1Q9C099 1032 aa6.99□□□□□ -1.29
KDM3B-204ENST00000507996 NAT10Q9H0A0 1025 aaKnown RBP6.99□□□□□ -1.29
KDM3B-204ENST00000507996 TFCP2L1Q9NZI6 479 aa6.99□□□□□ -1.29
KDM3B-204ENST00000507996 ZNF652Q9Y2D9 606 aa6.99□□□□□ -1.29
KDM3B-204ENST00000507996 UBN2Q6ZU65 1347 aa6.99□□□□□ -1.29
KDM3B-204ENST00000507996 CNTNAP4Q9C0A0 1308 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 IRS4O14654 1257 aaPredicted RBP6.98□□□□□ -1.29
KDM3B-204ENST00000507996 MYO1BO43795 1136 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 SLC8A3P57103 927 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 EN1Q05925 392 aaPredicted RBP6.98□□□□□ -1.29
KDM3B-204ENST00000507996 HOMER1Q86YM7 354 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 CEP57L1Q8IYX8 460 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 CEP112Q8N8E3 955 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 ZNF483Q8TF39 744 aaPredicted RBP6.98□□□□□ -1.29
KDM3B-204ENST00000507996 ZNF594Q96JF6 807 aaPredicted RBP6.98□□□□□ -1.29
KDM3B-204ENST00000507996 LSG1Q9H089 658 aaKnown RBP6.98□□□□□ -1.29
KDM3B-204ENST00000507996 CDHR2Q9BYE9 1310 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 LARGE1O95461 756 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 TBC1D9BQ66K14 1250 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 NAIF1Q69YI7 327 aaPredicted RBP6.98□□□□□ -1.29
KDM3B-204ENST00000507996 TLDC1Q6P9B6 456 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 ZBTB38Q8NAP3 1195 aaPredicted RBP6.98□□□□□ -1.29
KDM3B-204ENST00000507996 PSMD1Q99460 953 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 FAM204AQ9H8W3 233 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 UTYO14607 1347 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 N4BP1O75113 896 aaKnown RBP6.98□□□□□ -1.29
KDM3B-204ENST00000507996 NF2P35240 595 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 TRAF1Q13077 416 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 CASP8Q14790 479 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 HSP90B2PQ58FF3 399 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 RC3H1Q5TC82 1133 aaKnown RBP6.98□□□□□ -1.29
KDM3B-204ENST00000507996 FBXW10Q5XX13 1052 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 WDR93Q6P2C0 686 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 TMEM139Q8IV31 216 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 MAB21L3Q8N8X9 362 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 N4BP2L2Q92802 583 aaPredicted RBP6.98□□□□□ -1.29
KDM3B-204ENST00000507996 BAG1Q99933 345 aaPredicted RBP6.98□□□□□ -1.29
KDM3B-204ENST00000507996 JPH2Q9BR39 696 aaPredicted RBP6.98□□□□□ -1.29
KDM3B-204ENST00000507996 ZSWIM6Q9HCJ5 1215 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 GGA2Q9UJY4 613 aa6.98□□□□□ -1.29
KDM3B-204ENST00000507996 ZC3H4Q9UPT8 1303 aaKnown RBP6.97□□□□□ -1.29
KDM3B-204ENST00000507996 A6NNZ2 444 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 BECN2A8MW95 431 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 EBAG9O00559 213 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 CUTAO60888 179 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 COQ9O75208 318 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 IPO7O95373 1038 aaKnown RBP6.97□□□□□ -1.29
KDM3B-204ENST00000507996 PCCAP05165 728 aaPredicted RBP6.97□□□□□ -1.29
KDM3B-204ENST00000507996 INPP5BP32019 993 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 DSG3P32926 999 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms