RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 SH3BP5LQ7L8J4 393 aa23.88■■□□□ 1.41
USP53-203ENST00000507597 EPB41L4AQ9HCS5 686 aaPredicted RBP23.88■■□□□ 1.41
USP53-203ENST00000507597 PCP11498 1178 aaKnown RBP23.87■■□□□ 1.41
USP53-203ENST00000507597 RNF20Q5VTR2 975 aa23.87■■□□□ 1.41
USP53-203ENST00000507597 METTL16Q86W50 562 aaKnown RBP23.87■■□□□ 1.41
USP53-203ENST00000507597 MAP4K1Q92918 833 aa23.87■■□□□ 1.41
USP53-203ENST00000507597 RNF41Q9H4P4 317 aaPredicted RBP23.87■■□□□ 1.41
USP53-203ENST00000507597 FOCADQ5VW36 1801 aa23.87■■□□□ 1.41
USP53-203ENST00000507597 TMEM88BA6NKF7 163 aa23.86■■□□□ 1.41
USP53-203ENST00000507597 PLCD1P51178 756 aa23.86■■□□□ 1.41
USP53-203ENST00000507597 C1QTNF8P60827 252 aa23.86■■□□□ 1.41
USP53-203ENST00000507597 PPARAQ07869 468 aa23.86■■□□□ 1.41
USP53-203ENST00000507597 MIGA2Q7L4E1 593 aa23.86■■□□□ 1.41
USP53-203ENST00000507597 MKNK2Q9HBH9 465 aa23.86■■□□□ 1.41
USP53-203ENST00000507597 GINM1Q9NU53 330 aa23.86■■□□□ 1.41
USP53-203ENST00000507597 ANAPC4Q9UJX5 808 aa23.86■■□□□ 1.41
USP53-203ENST00000507597 ANGEL1Q9UNK9 670 aaKnown RBP23.86■■□□□ 1.41
USP53-203ENST00000507597 MCCP23508 829 aa23.85■■□□□ 1.41
USP53-203ENST00000507597 MAP3K11Q16584 847 aa23.85■■□□□ 1.41
USP53-203ENST00000507597 CSADQ9Y600 493 aa23.85■■□□□ 1.41
USP53-203ENST00000507597 NAV1Q8NEY1 1877 aa23.84■■□□□ 1.41
USP53-203ENST00000507597 APLP1P51693 650 aa23.84■■□□□ 1.41
USP53-203ENST00000507597 MAP3K9P80192 1104 aa23.84■■□□□ 1.41
USP53-203ENST00000507597 SLC4A8Q2Y0W8 1093 aa23.84■■□□□ 1.41
USP53-203ENST00000507597 ANKRD13AQ8IZ07 590 aa23.84■■□□□ 1.41
USP53-203ENST00000507597 CCDC17Q96LX7 622 aa23.84■■□□□ 1.41
USP53-203ENST00000507597 LSG1Q9H089 658 aaKnown RBP23.84■■□□□ 1.41
USP53-203ENST00000507597 IL25Q9H293 177 aa23.84■■□□□ 1.41
USP53-203ENST00000507597 MYH1P12882 1939 aa23.84■■□□□ 1.41
USP53-203ENST00000507597 CTNND1O60716 968 aaKnown RBP23.83■■□□□ 1.41
USP53-203ENST00000507597 USP2O75604 605 aaPredicted RBP23.83■■□□□ 1.41
USP53-203ENST00000507597 PTH1RQ03431 593 aa23.83■■□□□ 1.41
USP53-203ENST00000507597 PRKG1Q13976 671 aa23.83■■□□□ 1.41
USP53-203ENST00000507597 C16orf86Q6ZW13 317 aa23.83■■□□□ 1.41
USP53-203ENST00000507597 ZNF444Q8N0Y2 327 aaPredicted RBP23.83■■□□□ 1.41
USP53-203ENST00000507597 KLRG1Q96E93 195 aa23.83■■□□□ 1.41
USP53-203ENST00000507597 WRNIP1Q96S55 665 aa23.83■■□□□ 1.41
USP53-203ENST00000507597 CABP5Q9NP86 173 aa23.83■■□□□ 1.41
USP53-203ENST00000507597 CDK5RAP2Q96SN8 1893 aa23.83■■□□□ 1.4
USP53-203ENST00000507597 FOXP2O15409 715 aa23.82■■□□□ 1.4
USP53-203ENST00000507597 GABPAQ06546 454 aa23.82■■□□□ 1.4
USP53-203ENST00000507597 CERKLQ49MI3 558 aaPredicted RBP23.82■■□□□ 1.4
USP53-203ENST00000507597 ZNF112Q9UJU3 913 aa23.82■■□□□ 1.4
USP53-203ENST00000507597 RBM8AQ9Y5S9 174 aaKnown RBP23.82■■□□□ 1.4
USP53-203ENST00000507597 ROBO3Q96MS0 1386 aa23.81■■□□□ 1.4
USP53-203ENST00000507597 CYP2D6P10635 497 aa23.81■■□□□ 1.4
USP53-203ENST00000507597 ZKSCAN1P17029 563 aaPredicted RBP23.81■■□□□ 1.4
USP53-203ENST00000507597 CDK8P49336 464 aa23.81■■□□□ 1.4
USP53-203ENST00000507597 TRDNQ13061 729 aa23.81■■□□□ 1.4
USP53-203ENST00000507597 CST9Q5W186 159 aa23.81■■□□□ 1.4
USP53-203ENST00000507597 DLK2Q6UY11 383 aa23.81■■□□□ 1.4
USP53-203ENST00000507597 MFSD6Q6ZSS7 791 aa23.81■■□□□ 1.4
USP53-203ENST00000507597 CDAN1Q8IWY9 1227 aa23.81■■□□□ 1.4
USP53-203ENST00000507597 CNNM2Q9H8M5 875 aa23.81■■□□□ 1.4
USP53-203ENST00000507597 UPF2Q9HAU5 1272 aaKnown RBP23.81■■□□□ 1.4
USP53-203ENST00000507597 CREBZFQ9NS37 354 aa23.81■■□□□ 1.4
USP53-203ENST00000507597 TATDN1Q6P1N9 297 aa23.8■■□□□ 1.4
USP53-203ENST00000507597 PICK1Q9NRD5 415 aa23.8■■□□□ 1.4
USP53-203ENST00000507597 ABT1Q9ULW3 272 aaKnown RBP23.8■■□□□ 1.4
USP53-203ENST00000507597 CYP2D7A0A087X1C5 515 aa23.79■■□□□ 1.4
USP53-203ENST00000507597 HUNKP57058 714 aa23.79■■□□□ 1.4
USP53-203ENST00000507597 FMR1Q06787 632 aaKnown RBP eCLIP23.79■■□□□ 1.4
USP53-203ENST00000507597 PPP4R3BQ5MIZ7 849 aa23.79■■□□□ 1.4
USP53-203ENST00000507597 AKNAD1Q5T1N1 836 aa23.79■■□□□ 1.4
USP53-203ENST00000507597 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.79■■□□□ 1.4
USP53-203ENST00000507597 HHIPL1Q96JK4 782 aa23.79■■□□□ 1.4
USP53-203ENST00000507597 TBC1D2Q9BYX2 928 aa23.79■■□□□ 1.4
USP53-203ENST00000507597 TOMM22Q9NS69 142 aa23.79■■□□□ 1.4
USP53-203ENST00000507597 TRPM7Q96QT4 1865 aa23.79■■□□□ 1.4
USP53-203ENST00000507597 PAPPA2Q9BXP8 1791 aa23.78■■□□□ 1.4
USP53-203ENST00000507597 ASNSP08243 561 aa23.78■■□□□ 1.4
USP53-203ENST00000507597 CAP2P40123 477 aa23.78■■□□□ 1.4
USP53-203ENST00000507597 HAND2P61296 217 aa23.78■■□□□ 1.4
USP53-203ENST00000507597 STAG1Q8WVM7 1258 aa23.78■■□□□ 1.4
USP53-203ENST00000507597 SLC10A4Q96EP9 437 aa23.78■■□□□ 1.4
USP53-203ENST00000507597 DYNLL2Q96FJ2 89 aa23.78■■□□□ 1.4
USP53-203ENST00000507597 KRT23Q9C075 422 aa23.78■■□□□ 1.4
USP53-203ENST00000507597 TLL2Q9Y6L7 1015 aa23.78■■□□□ 1.4
USP53-203ENST00000507597 PHF20L1A8MW92 1017 aa23.77■■□□□ 1.4
USP53-203ENST00000507597 UBE2Q2LH0YL09 131 aa23.77■■□□□ 1.4
USP53-203ENST00000507597 CTDSPL2Q05D32 466 aa23.77■■□□□ 1.4
USP53-203ENST00000507597 KRT32Q14532 448 aa23.77■■□□□ 1.4
USP53-203ENST00000507597 NECTIN1Q15223 517 aa23.77■■□□□ 1.4
USP53-203ENST00000507597 ABCB5Q2M3G0 1257 aa23.77■■□□□ 1.4
USP53-203ENST00000507597 NOL9Q5SY16 702 aaKnown RBP23.77■■□□□ 1.4
USP53-203ENST00000507597 LDLRAD1Q5T700 205 aa23.77■■□□□ 1.4
USP53-203ENST00000507597 SCYL3Q8IZE3 742 aa23.77■■□□□ 1.4
USP53-203ENST00000507597 SSC5DA1L4H1 1573 aa23.77■■□□□ 1.4
USP53-203ENST00000507597 BAZ2AQ9UIF9 1905 aaKnown RBP23.76■■□□□ 1.39
USP53-203ENST00000507597 DDX60LQ5H9U9 1706 aaKnown RBP23.76■■□□□ 1.39
USP53-203ENST00000507597 MPHOSPH10O00566 681 aaKnown RBP23.76■■□□□ 1.39
USP53-203ENST00000507597 ORC4O43929 436 aa23.76■■□□□ 1.39
USP53-203ENST00000507597 SHMT1P34896 483 aa23.76■■□□□ 1.39
USP53-203ENST00000507597 C8orf34Q49A92 452 aa23.76■■□□□ 1.39
USP53-203ENST00000507597 SAPCD2Q86UD0 394 aa23.76■■□□□ 1.39
USP53-203ENST00000507597 STK11IPQ8N1F8 1099 aa23.76■■□□□ 1.39
USP53-203ENST00000507597 ESR2Q92731 530 aa23.76■■□□□ 1.39
USP53-203ENST00000507597 FAM196BA6NMK8 535 aa23.75■■□□□ 1.39
USP53-203ENST00000507597 CYP21A2P08686 494 aa23.75■■□□□ 1.39
USP53-203ENST00000507597 FGRP09769 529 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms