RNA–Protein interactions for RNA: ENST00000507528.5

PDCD6-206, Transcript of programmed cell death 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDCD6, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-206ENST00000507528 HDAC5Q9UQL6 1122 aa23.61■■□□□ 1.37
PDCD6-206ENST00000507528 COL2A1P02458 1487 aaPredicted RBP23.61■■□□□ 1.37
PDCD6-206ENST00000507528 NECAB2Q7Z6G3 386 aa23.6■■□□□ 1.37
PDCD6-206ENST00000507528 ANKLE1Q8NAG6 615 aa23.6■■□□□ 1.37
PDCD6-206ENST00000507528 TAOK2Q9UL54 1235 aa23.6■■□□□ 1.37
PDCD6-206ENST00000507528 A0A1B0GUL7 405 aa23.59■■□□□ 1.37
PDCD6-206ENST00000507528 FAM196BA6NMK8 535 aa23.59■■□□□ 1.37
PDCD6-206ENST00000507528 GCLCP48506 637 aaPredicted RBP23.59■■□□□ 1.37
PDCD6-206ENST00000507528 ERICH6Q7L0X2 663 aa23.59■■□□□ 1.37
PDCD6-206ENST00000507528 ZNF280CQ8ND82 737 aa23.59■■□□□ 1.37
PDCD6-206ENST00000507528 DIS3LQ8TF46 1054 aaKnown RBP23.59■■□□□ 1.37
PDCD6-206ENST00000507528 XAGE2Q96GT9 111 aa23.59■■□□□ 1.37
PDCD6-206ENST00000507528 TBC1D2Q9BYX2 928 aa23.59■■□□□ 1.37
PDCD6-206ENST00000507528 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.59■■□□□ 1.37
PDCD6-206ENST00000507528 MAP4K4O95819 1239 aaPredicted RBP23.58■■□□□ 1.37
PDCD6-206ENST00000507528 HMGCRP04035 888 aa23.58■■□□□ 1.37
PDCD6-206ENST00000507528 SPP2Q13103 211 aa23.58■■□□□ 1.37
PDCD6-206ENST00000507528 SLC17A8Q8NDX2 589 aa23.58■■□□□ 1.37
PDCD6-206ENST00000507528 LRCH3Q96II8 777 aa23.58■■□□□ 1.37
PDCD6-206ENST00000507528 GJD2Q9UKL4 321 aa23.58■■□□□ 1.37
PDCD6-206ENST00000507528 DDX60LQ5H9U9 1706 aaKnown RBP23.57■■□□□ 1.36
PDCD6-206ENST00000507528 BMP8BP34820 402 aa23.57■■□□□ 1.36
PDCD6-206ENST00000507528 MVPQ14764 893 aaKnown RBP23.57■■□□□ 1.36
PDCD6-206ENST00000507528 GDF15Q99988 308 aa23.57■■□□□ 1.36
PDCD6-206ENST00000507528 NOB1Q9ULX3 412 aaKnown RBP23.57■■□□□ 1.36
PDCD6-206ENST00000507528 AKAP2Q9Y2D5 859 aa23.57■■□□□ 1.36
PDCD6-206ENST00000507528 SIPA1L1O43166 1804 aa23.56■■□□□ 1.36
PDCD6-206ENST00000507528 HMGCS2P54868 508 aa23.56■■□□□ 1.36
PDCD6-206ENST00000507528 TFCP2Q12800 502 aa23.56■■□□□ 1.36
PDCD6-206ENST00000507528 PABPC4Q13310 644 aaKnown RBP eCLIP23.56■■□□□ 1.361e-7■■□□□ 12.2
PDCD6-206ENST00000507528 SH3D19Q5HYK7 790 aa23.56■■□□□ 1.36
PDCD6-206ENST00000507528 TRMT2AQ8IZ69 625 aaKnown RBP23.56■■□□□ 1.36
PDCD6-206ENST00000507528 NSUN4Q96CB9 384 aaKnown RBP23.56■■□□□ 1.36
PDCD6-206ENST00000507528 CDCA7LQ96GN5 454 aa23.56■■□□□ 1.36
PDCD6-206ENST00000507528 MEIS3Q99687 375 aa23.56■■□□□ 1.36
PDCD6-206ENST00000507528 RPTORQ8N122 1335 aa23.56■■□□□ 1.36
PDCD6-206ENST00000507528 CAP2P40123 477 aa23.55■■□□□ 1.36
PDCD6-206ENST00000507528 MNX1P50219 401 aaPredicted RBP23.55■■□□□ 1.36
PDCD6-206ENST00000507528 RRP1BQ14684 758 aaKnown RBP23.55■■□□□ 1.36
PDCD6-206ENST00000507528 API5Q9BZZ5 524 aaKnown RBP23.55■■□□□ 1.36
PDCD6-206ENST00000507528 ASCC2Q9H1I8 757 aaPredicted RBP23.55■■□□□ 1.36
PDCD6-206ENST00000507528 HMG20BQ9P0W2 317 aa23.55■■□□□ 1.36
PDCD6-206ENST00000507528 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.55■■□□□ 1.36
PDCD6-206ENST00000507528 DLL1O00548 723 aa23.54■■□□□ 1.36
PDCD6-206ENST00000507528 LDHCP07864 332 aa23.54■■□□□ 1.36
PDCD6-206ENST00000507528 HMX1Q9NP08 348 aaPredicted RBP23.54■■□□□ 1.36
PDCD6-206ENST00000507528 USP17L5A8MUK1 530 aa23.53■■□□□ 1.36
PDCD6-206ENST00000507528 CT47B1P0C2W7 299 aaPredicted RBP23.53■■□□□ 1.36
PDCD6-206ENST00000507528 GSTO1P78417 241 aa23.53■■□□□ 1.36
PDCD6-206ENST00000507528 TRIM32Q13049 653 aa23.53■■□□□ 1.36
PDCD6-206ENST00000507528 MTX1Q13505 466 aa23.53■■□□□ 1.36
PDCD6-206ENST00000507528 GPR153Q6NV75 609 aa23.53■■□□□ 1.36
PDCD6-206ENST00000507528 NBPF3Q9H094 633 aa23.53■■□□□ 1.36
PDCD6-206ENST00000507528 MORF4L1Q9UBU8 362 aa23.53■■□□□ 1.36
PDCD6-206ENST00000507528 CDK5RAP2Q96SN8 1893 aa23.53■■□□□ 1.36
PDCD6-206ENST00000507528 SRGAP3O43295 1099 aa23.52■■□□□ 1.36
PDCD6-206ENST00000507528 PI16Q6UXB8 463 aa23.52■■□□□ 1.36
PDCD6-206ENST00000507528 C7orf61Q8IZ16 206 aa23.52■■□□□ 1.36
PDCD6-206ENST00000507528 SPATA5Q8NB90 893 aa23.52■■□□□ 1.36
PDCD6-206ENST00000507528 HERC5Q9UII4 1024 aaKnown RBP23.52■■□□□ 1.36
PDCD6-206ENST00000507528 FOCADQ5VW36 1801 aa23.52■■□□□ 1.36
PDCD6-206ENST00000507528 TBC1D9Q6ZT07 1266 aa23.51■■□□□ 1.35
PDCD6-206ENST00000507528 TRIB2Q92519 343 aa23.51■■□□□ 1.35
PDCD6-206ENST00000507528 NEUROD6Q96NK8 337 aa23.51■■□□□ 1.35
PDCD6-206ENST00000507528 AS3MTQ9HBK9 375 aa23.51■■□□□ 1.35
PDCD6-206ENST00000507528 OGDHLQ9ULD0 1010 aa23.51■■□□□ 1.35
PDCD6-206ENST00000507528 ARID4AP29374 1257 aaPredicted RBP23.5■■□□□ 1.35
PDCD6-206ENST00000507528 MAP3K21Q5TCX8 1036 aa23.5■■□□□ 1.35
PDCD6-206ENST00000507528 WDR18Q9BV38 432 aa23.5■■□□□ 1.35
PDCD6-206ENST00000507528 ZMYND8Q9ULU4 1186 aaPredicted RBP23.5■■□□□ 1.35
PDCD6-206ENST00000507528 HOXA7P31268 230 aaPredicted RBP23.49■■□□□ 1.35
PDCD6-206ENST00000507528 TEX11Q8IYF3 940 aa23.49■■□□□ 1.35
PDCD6-206ENST00000507528 C11orf49Q9H6J7 331 aa23.49■■□□□ 1.35
PDCD6-206ENST00000507528 RAI14Q9P0K7 980 aa23.49■■□□□ 1.35
PDCD6-206ENST00000507528 MAST2Q6P0Q8 1798 aa23.49■■□□□ 1.35
PDCD6-206ENST00000507528 DNAH12Q6ZR08 3092 aa23.48■■□□□ 1.35
PDCD6-206ENST00000507528 GNAI3P08754 354 aa23.48■■□□□ 1.35
PDCD6-206ENST00000507528 BACE1P56817 501 aa23.48■■□□□ 1.35
PDCD6-206ENST00000507528 LRIT3Q3SXY7 679 aa23.48■■□□□ 1.35
PDCD6-206ENST00000507528 PI4KBQ9UBF8 816 aa23.48■■□□□ 1.35
PDCD6-206ENST00000507528 XRCC5P13010 732 aaKnown RBP23.47■■□□□ 1.35
PDCD6-206ENST00000507528 MCAMP43121 646 aa23.47■■□□□ 1.35
PDCD6-206ENST00000507528 MTMR2Q13614 643 aa23.47■■□□□ 1.35
PDCD6-206ENST00000507528 SH3RF3Q8TEJ3 882 aaPredicted RBP23.47■■□□□ 1.35
PDCD6-206ENST00000507528 DHX36Q9H2U1 1008 aaKnown RBP23.47■■□□□ 1.35
PDCD6-206ENST00000507528 ASNSP08243 561 aa23.46■■□□□ 1.35
PDCD6-206ENST00000507528 CYP2B6P20813 491 aa23.46■■□□□ 1.35
PDCD6-206ENST00000507528 IRX3P78415 501 aaPredicted RBP23.46■■□□□ 1.35
PDCD6-206ENST00000507528 GORABQ5T7V8 394 aa23.46■■□□□ 1.35
PDCD6-206ENST00000507528 METTL16Q86W50 562 aaKnown RBP23.46■■□□□ 1.35
PDCD6-206ENST00000507528 ARHGAP45Q92619 1136 aa23.46■■□□□ 1.35
PDCD6-206ENST00000507528 P2RX7Q99572 595 aaKnown RBP23.46■■□□□ 1.35
PDCD6-206ENST00000507528 TXNRD2Q9NNW7 524 aa23.46■■□□□ 1.35
PDCD6-206ENST00000507528 UNC80Q8N2C7 3258 aa23.46■■□□□ 1.35
PDCD6-206ENST00000507528 MYO5AQ9Y4I1 1855 aaKnown RBP23.45■■□□□ 1.35
PDCD6-206ENST00000507528 LAMA2P24043 3122 aaKnown RBP23.45■■□□□ 1.34
PDCD6-206ENST00000507528 PFASO15067 1338 aa23.45■■□□□ 1.34
PDCD6-206ENST00000507528 PRKAR2AP13861 404 aaKnown RBP23.45■■□□□ 1.34
PDCD6-206ENST00000507528 SYN1P17600 705 aa23.45■■□□□ 1.34
PDCD6-206ENST00000507528 MAGEA10P43363 369 aaPredicted RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms