RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 ACBD3Q9H3P7 528 aa20.23■□□□□ 0.83
NUP54-205ENST00000507257 MED4Q9NPJ6 270 aa20.23■□□□□ 0.83
NUP54-205ENST00000507257 FBXO2Q9UK22 296 aaPredicted RBP20.23■□□□□ 0.83
NUP54-205ENST00000507257 CTAGE9A4FU28 777 aa20.23■□□□□ 0.83
NUP54-205ENST00000507257 PIP4K2BP78356 416 aa20.23■□□□□ 0.83
NUP54-205ENST00000507257 PDE4CQ08493 712 aa20.23■□□□□ 0.83
NUP54-205ENST00000507257 NOSTRINQ8IVI9 506 aa20.23■□□□□ 0.83
NUP54-205ENST00000507257 MED15Q96RN5 788 aa20.23■□□□□ 0.83
NUP54-205ENST00000507257 CTAGE1Q96RT6 745 aa20.23■□□□□ 0.83
NUP54-205ENST00000507257 TEX13AQ9BXU3 409 aaPredicted RBP20.23■□□□□ 0.83
NUP54-205ENST00000507257 NBPF3Q9H094 633 aa20.23■□□□□ 0.83
NUP54-205ENST00000507257 LCMT1Q9UIC8 334 aa20.23■□□□□ 0.83
NUP54-205ENST00000507257 TATP17735 454 aaPredicted RBP20.22■□□□□ 0.83
NUP54-205ENST00000507257 FKBP4Q02790 459 aaKnown RBP eCLIP20.22■□□□□ 0.83
NUP54-205ENST00000507257 PTPN21Q16825 1174 aa20.22■□□□□ 0.83
NUP54-205ENST00000507257 RILPL1Q5EBL4 403 aa20.22■□□□□ 0.83
NUP54-205ENST00000507257 RAD9BQ6WBX8 426 aa20.22■□□□□ 0.83
NUP54-205ENST00000507257 GOLGA6L1Q8N7Z2 621 aa20.22■□□□□ 0.83
NUP54-205ENST00000507257 PUS7LQ9H0K6 701 aaKnown RBP20.22■□□□□ 0.83
NUP54-205ENST00000507257 VIPAS39Q9H9C1 493 aa20.22■□□□□ 0.83
NUP54-205ENST00000507257 UBN2Q6ZU65 1347 aa20.22■□□□□ 0.83
NUP54-205ENST00000507257 LRP6O75581 1613 aa20.22■□□□□ 0.83
NUP54-205ENST00000507257 SOWAHDA6NJG2 315 aa20.21■□□□□ 0.83
NUP54-205ENST00000507257 FOXN1O15353 648 aa20.21■□□□□ 0.83
NUP54-205ENST00000507257 NOP2P46087 812 aaKnown RBP20.21■□□□□ 0.83
NUP54-205ENST00000507257 SPATA1Q5VX52 437 aa20.21■□□□□ 0.83
NUP54-205ENST00000507257 WDR93Q6P2C0 686 aa20.21■□□□□ 0.83
NUP54-205ENST00000507257 PPFIBP1Q86W92 1011 aa20.21■□□□□ 0.83
NUP54-205ENST00000507257 RAB11FIP4Q86YS3 637 aa20.21■□□□□ 0.83
NUP54-205ENST00000507257 PNKPQ96T60 521 aa20.21■□□□□ 0.83
NUP54-205ENST00000507257 VPS18Q9P253 973 aa20.21■□□□□ 0.83
NUP54-205ENST00000507257 RSPH14Q9UHP6 348 aa20.21■□□□□ 0.83
NUP54-205ENST00000507257 MYO5AQ9Y4I1 1855 aaKnown RBP20.21■□□□□ 0.83
NUP54-205ENST00000507257 FER1L4A9Z1Z3 1794 aa20.21■□□□□ 0.83
NUP54-205ENST00000507257 ZBTB43O43298 467 aa20.21■□□□□ 0.83
NUP54-205ENST00000507257 LIFRP42702 1097 aa20.21■□□□□ 0.83
NUP54-205ENST00000507257 MTF1Q14872 753 aa20.21■□□□□ 0.83
NUP54-205ENST00000507257 CYB5R4Q7L1T6 521 aa20.21■□□□□ 0.83
NUP54-205ENST00000507257 CNGA4Q8IV77 575 aa20.21■□□□□ 0.83
NUP54-205ENST00000507257 XAGE2Q96GT9 111 aa20.21■□□□□ 0.83
NUP54-205ENST00000507257 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.21■□□□□ 0.83
NUP54-205ENST00000507257 FOXP1Q9H334 677 aaPredicted RBP20.21■□□□□ 0.83
NUP54-205ENST00000507257 ABCB6Q9NP58 842 aa20.21■□□□□ 0.83
NUP54-205ENST00000507257 TBC1D2BQ9UPU7 963 aa20.21■□□□□ 0.83
NUP54-205ENST00000507257 ACTN4O43707 911 aaKnown RBP20.2■□□□□ 0.82
NUP54-205ENST00000507257 MFAP3LO75121 409 aa20.2■□□□□ 0.82
NUP54-205ENST00000507257 FMNL1O95466 1100 aaPredicted RBP20.2■□□□□ 0.82
NUP54-205ENST00000507257 TNNT3P45378 269 aaPredicted RBP20.2■□□□□ 0.82
NUP54-205ENST00000507257 GYS2P54840 703 aa20.2■□□□□ 0.82
NUP54-205ENST00000507257 C10orf67Q8IYJ2 551 aa20.2■□□□□ 0.82
NUP54-205ENST00000507257 IGDCC4Q8TDY8 1250 aa20.2■□□□□ 0.82
NUP54-205ENST00000507257 ZNF512BQ96KM6 892 aaPredicted RBP20.2■□□□□ 0.82
NUP54-205ENST00000507257 SAMSN1Q9NSI8 373 aaKnown RBP20.2■□□□□ 0.82
NUP54-205ENST00000507257 FAM217BQ9NTX9 383 aaPredicted RBP20.2■□□□□ 0.82
NUP54-205ENST00000507257 ADD3Q9UEY8 706 aaKnown RBP20.2■□□□□ 0.82
NUP54-205ENST00000507257 SERTAD1Q9UHV2 236 aa20.2■□□□□ 0.82
NUP54-205ENST00000507257 SRPRBQ9Y5M8 271 aaKnown RBP20.2■□□□□ 0.82
NUP54-205ENST00000507257 RANBP6O60518 1105 aaKnown RBP20.19■□□□□ 0.82
NUP54-205ENST00000507257 MAGEA9P43362 315 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 MCM6Q14566 821 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 CASP8Q14790 479 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 CDKAL1Q5VV42 579 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 IGSF22Q8N9C0 903 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 IRX2Q9BZI1 471 aaPredicted RBP20.19■□□□□ 0.82
NUP54-205ENST00000507257 CEP131Q9UPN4 1083 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 AKAP11Q9UKA4 1901 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 CTAGE15A4D2H0 777 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 TRIM66O15016 1216 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 POLR2DO15514 142 aaKnown RBP20.19■□□□□ 0.82
NUP54-205ENST00000507257 MMP1P03956 469 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 PRR29P0C7W0 189 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 CTAGE8P0CG41 777 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 IFNAR1P17181 557 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 TOB1P50616 345 aaPredicted RBP20.19■□□□□ 0.82
NUP54-205ENST00000507257 SAFBQ15424 915 aaKnown RBP eCLIP20.19■□□□□ 0.82
NUP54-205ENST00000507257 KIF4BQ2VIQ3 1234 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 CTAGE6Q86UF2 777 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 TBC1D10CQ8IV04 446 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 CTAGE4Q8IX94 777 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 PHKBQ93100 1093 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 NAPGQ99747 312 aaPredicted RBP20.19■□□□□ 0.82
NUP54-205ENST00000507257 BCL9LQ86UU0 1499 aa20.19■□□□□ 0.82
NUP54-205ENST00000507257 MEGF6O75095 1541 aa20.18■□□□□ 0.82
NUP54-205ENST00000507257 SSRP1Q08945 709 aaKnown RBP20.18■□□□□ 0.82
NUP54-205ENST00000507257 RBL2Q08999 1139 aa20.18■□□□□ 0.82
NUP54-205ENST00000507257 HSP90B2PQ58FF3 399 aa20.18■□□□□ 0.82
NUP54-205ENST00000507257 ZNF569Q5MCW4 686 aa20.18■□□□□ 0.82
NUP54-205ENST00000507257 SLC9C2Q5TAH2 1124 aa20.18■□□□□ 0.82
NUP54-205ENST00000507257 TMTC1Q8IUR5 882 aa20.18■□□□□ 0.82
NUP54-205ENST00000507257 LY9Q9HBG7 655 aa20.18■□□□□ 0.82
NUP54-205ENST00000507257 LZTFL1Q9NQ48 299 aa20.18■□□□□ 0.82
NUP54-205ENST00000507257 PUF60Q9UHX1 559 aaKnown RBP20.18■□□□□ 0.82
NUP54-205ENST00000507257 WWC3Q9ULE0 1092 aa20.18■□□□□ 0.82
NUP54-205ENST00000507257 GOLGA8AA7E2F4 631 aa20.17■□□□□ 0.82
NUP54-205ENST00000507257 ADD2P35612 726 aa20.17■□□□□ 0.82
NUP54-205ENST00000507257 PIP4K2AP48426 406 aaPredicted RBP20.17■□□□□ 0.82
NUP54-205ENST00000507257 AARSP49588 968 aaKnown RBP eCLIP20.17■□□□□ 0.82
NUP54-205ENST00000507257 CUL4BQ13620 913 aa20.17■□□□□ 0.82
NUP54-205ENST00000507257 ALX1Q15699 326 aa20.17■□□□□ 0.82
NUP54-205ENST00000507257 FILIP1LQ4L180 1135 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms