RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 TTC22Q5TAA0 569 aa21.88■■□□□ 1.09
NPHP4-210ENST00000506941 RILPL2Q969X0 211 aa21.88■■□□□ 1.09
NPHP4-210ENST00000506941 SLC10A4Q96EP9 437 aa21.88■■□□□ 1.09
NPHP4-210ENST00000506941 STRBPQ96SI9 672 aaKnown RBP21.88■■□□□ 1.09
NPHP4-210ENST00000506941 DNAJC18Q9H819 358 aa21.88■■□□□ 1.09
NPHP4-210ENST00000506941 GPAA1O43292 621 aa21.87■■□□□ 1.09
NPHP4-210ENST00000506941 TBC1D12O60347 775 aa21.87■■□□□ 1.09
NPHP4-210ENST00000506941 GJA5P36382 358 aa21.87■■□□□ 1.09
NPHP4-210ENST00000506941 EVX2Q03828 476 aa21.87■■□□□ 1.09
NPHP4-210ENST00000506941 MKRN3Q13064 507 aaKnown RBP21.87■■□□□ 1.09
NPHP4-210ENST00000506941 CNKSR2Q8WXI2 1034 aa21.87■■□□□ 1.09
NPHP4-210ENST00000506941 WNK4Q96J92 1243 aa21.87■■□□□ 1.09
NPHP4-210ENST00000506941 PI4KBQ9UBF8 816 aa21.87■■□□□ 1.09
NPHP4-210ENST00000506941 CSADQ9Y600 493 aa21.87■■□□□ 1.09
NPHP4-210ENST00000506941 SLC4A4Q9Y6R1 1079 aa21.87■■□□□ 1.09
NPHP4-210ENST00000506941 MAP2K2P36507 400 aa21.86■■□□□ 1.09
NPHP4-210ENST00000506941 SPRYD7Q5W111 196 aa21.86■■□□□ 1.09
NPHP4-210ENST00000506941 METTL16Q86W50 562 aaKnown RBP21.86■■□□□ 1.09
NPHP4-210ENST00000506941 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.86■■□□□ 1.09
NPHP4-210ENST00000506941 RRP1BQ14684 758 aaKnown RBP21.85■■□□□ 1.09
NPHP4-210ENST00000506941 ERICH6BQ5W0A0 696 aa21.85■■□□□ 1.09
NPHP4-210ENST00000506941 OPTNQ96CV9 577 aa21.85■■□□□ 1.09
NPHP4-210ENST00000506941 FAM227BQ96M60 508 aa21.85■■□□□ 1.09
NPHP4-210ENST00000506941 ATP8A2Q9NTI2 1148 aa21.85■■□□□ 1.09
NPHP4-210ENST00000506941 MCM9Q9NXL9 1143 aa21.85■■□□□ 1.09
NPHP4-210ENST00000506941 HERC5Q9UII4 1024 aaKnown RBP21.85■■□□□ 1.09
NPHP4-210ENST00000506941 A0A0D9SFI3 127 aa21.84■■□□□ 1.09
NPHP4-210ENST00000506941 HLA-DOAP06340 250 aa21.84■■□□□ 1.09
NPHP4-210ENST00000506941 CYP2D6P10635 497 aa21.84■■□□□ 1.09
NPHP4-210ENST00000506941 PLCD1P51178 756 aa21.84■■□□□ 1.09
NPHP4-210ENST00000506941 KIF23Q02241 960 aaPredicted RBP21.84■■□□□ 1.09
NPHP4-210ENST00000506941 NOL9Q5SY16 702 aaKnown RBP21.84■■□□□ 1.09
NPHP4-210ENST00000506941 CCDC129Q6ZRS4 1044 aa21.84■■□□□ 1.09
NPHP4-210ENST00000506941 TICAM2Q86XR7 235 aa21.84■■□□□ 1.09
NPHP4-210ENST00000506941 GSG1L2A8MUP6 293 aa21.83■■□□□ 1.09
NPHP4-210ENST00000506941 NMIQ13287 307 aaPredicted RBP21.83■■□□□ 1.09
NPHP4-210ENST00000506941 EHD4Q9H223 541 aa21.83■■□□□ 1.09
NPHP4-210ENST00000506941 EPB41L4AQ9HCS5 686 aaPredicted RBP21.83■■□□□ 1.09
NPHP4-210ENST00000506941 CYP2D7A0A087X1C5 515 aa21.82■■□□□ 1.08
NPHP4-210ENST00000506941 SPDYE5A6NIY4 337 aa21.82■■□□□ 1.08
NPHP4-210ENST00000506941 SMIM22K7EJ46 135 aa21.82■■□□□ 1.08
NPHP4-210ENST00000506941 POLR3DP05423 398 aaPredicted RBP21.82■■□□□ 1.08
NPHP4-210ENST00000506941 ZBTB48P10074 688 aaPredicted RBP21.82■■□□□ 1.08
NPHP4-210ENST00000506941 SDSP20132 328 aa21.82■■□□□ 1.08
NPHP4-210ENST00000506941 FOXP4Q8IVH2 680 aaPredicted RBP21.82■■□□□ 1.08
NPHP4-210ENST00000506941 CRACR2BQ8N4Y2 399 aaPredicted RBP21.82■■□□□ 1.08
NPHP4-210ENST00000506941 OTUD5Q96G74 571 aa21.82■■□□□ 1.08
NPHP4-210ENST00000506941 PPP4R2Q9NY27 417 aa21.82■■□□□ 1.08
NPHP4-210ENST00000506941 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.82■■□□□ 1.08
NPHP4-210ENST00000506941 LAMA4Q16363 1823 aa21.82■■□□□ 1.08
NPHP4-210ENST00000506941 FOXP2O15409 715 aa21.81■■□□□ 1.08
NPHP4-210ENST00000506941 CTNND1O60716 968 aaKnown RBP21.81■■□□□ 1.08
NPHP4-210ENST00000506941 TTC6Q86TZ1 520 aa21.81■■□□□ 1.08
NPHP4-210ENST00000506941 ERO1BQ86YB8 467 aa21.81■■□□□ 1.08
NPHP4-210ENST00000506941 SCYL3Q8IZE3 742 aa21.81■■□□□ 1.08
NPHP4-210ENST00000506941 HELLSQ9NRZ9 838 aa21.81■■□□□ 1.08
NPHP4-210ENST00000506941 SERPINB13Q9UIV8 391 aa21.81■■□□□ 1.08
NPHP4-210ENST00000506941 USP17L12C9JPN9 530 aa21.8■■□□□ 1.08
NPHP4-210ENST00000506941 USP17L21D6R901 530 aa21.8■■□□□ 1.08
NPHP4-210ENST00000506941 GNAT2P19087 354 aa21.8■■□□□ 1.08
NPHP4-210ENST00000506941 GABPAQ06546 454 aa21.8■■□□□ 1.08
NPHP4-210ENST00000506941 SHROOM1Q2M3G4 852 aaPredicted RBP21.8■■□□□ 1.08
NPHP4-210ENST00000506941 CTR9Q6PD62 1173 aa21.8■■□□□ 1.08
NPHP4-210ENST00000506941 WBP1LQ9NX94 342 aa21.8■■□□□ 1.08
NPHP4-210ENST00000506941 LOC285556D6RIA3 1793 aa21.79■■□□□ 1.08
NPHP4-210ENST00000506941 GREB1LQ9C091 1923 aaPredicted RBP21.79■■□□□ 1.08
NPHP4-210ENST00000506941 CAP2P40123 477 aa21.79■■□□□ 1.08
NPHP4-210ENST00000506941 JAG1P78504 1218 aa21.79■■□□□ 1.08
NPHP4-210ENST00000506941 MAP2K1Q02750 393 aaPredicted RBP21.79■■□□□ 1.08
NPHP4-210ENST00000506941 C12orf60Q5U649 245 aa21.79■■□□□ 1.08
NPHP4-210ENST00000506941 GIMAP6Q6P9H5 292 aa21.79■■□□□ 1.08
NPHP4-210ENST00000506941 ZNF589Q86UQ0 364 aaPredicted RBP21.79■■□□□ 1.08
NPHP4-210ENST00000506941 TRIM34Q9BYJ4 488 aa21.79■■□□□ 1.08
NPHP4-210ENST00000506941 PATL2C9JE40 543 aaKnown RBP21.78■■□□□ 1.08
NPHP4-210ENST00000506941 HSPA1AP0DMV8 641 aaKnown RBP21.78■■□□□ 1.08
NPHP4-210ENST00000506941 HSPA1BP0DMV9 641 aaKnown RBP21.78■■□□□ 1.08
NPHP4-210ENST00000506941 PTPRAP18433 802 aa21.78■■□□□ 1.08
NPHP4-210ENST00000506941 SHMT1P34896 483 aa21.78■■□□□ 1.08
NPHP4-210ENST00000506941 PPIL2Q13356 520 aa21.78■■□□□ 1.08
NPHP4-210ENST00000506941 MCMDC2Q4G0Z9 681 aa21.78■■□□□ 1.08
NPHP4-210ENST00000506941 VPS53Q5VIR6 699 aa21.78■■□□□ 1.08
NPHP4-210ENST00000506941 TATDN1Q6P1N9 297 aa21.78■■□□□ 1.08
NPHP4-210ENST00000506941 CCDC84Q86UT8 332 aaPredicted RBP21.78■■□□□ 1.08
NPHP4-210ENST00000506941 DYNLL2Q96FJ2 89 aa21.78■■□□□ 1.08
NPHP4-210ENST00000506941 IRF6O14896 467 aa21.77■■□□□ 1.08
NPHP4-210ENST00000506941 GDF11O95390 407 aa21.77■■□□□ 1.08
NPHP4-210ENST00000506941 PPATQ06203 517 aa21.77■■□□□ 1.08
NPHP4-210ENST00000506941 IFNL3Q8IZI9 196 aa21.77■■□□□ 1.08
NPHP4-210ENST00000506941 SLC44A5Q8NCS7 719 aa21.77■■□□□ 1.08
NPHP4-210ENST00000506941 DDRGK1Q96HY6 314 aa21.77■■□□□ 1.08
NPHP4-210ENST00000506941 MS4A4AQ96JQ5 239 aa21.77■■□□□ 1.08
NPHP4-210ENST00000506941 PICK1Q9NRD5 415 aa21.77■■□□□ 1.08
NPHP4-210ENST00000506941 DIAPH3Q9NSV4 1193 aa21.77■■□□□ 1.08
NPHP4-210ENST00000506941 MANSC4A6NHS7 340 aaPredicted RBP21.76■■□□□ 1.07
NPHP4-210ENST00000506941 APPP05067 770 aa21.76■■□□□ 1.07
NPHP4-210ENST00000506941 TM4SF4P48230 202 aa21.76■■□□□ 1.07
NPHP4-210ENST00000506941 SBK1Q52WX2 424 aa21.76■■□□□ 1.07
NPHP4-210ENST00000506941 CWC27Q6UX04 472 aaKnown RBP21.76■■□□□ 1.07
NPHP4-210ENST00000506941 ARPP21Q9UBL0 812 aaPredicted RBP21.76■■□□□ 1.07
NPHP4-210ENST00000506941 CCDC171Q6TFL3 1326 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms