RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 MIR1-1HGQ9H1L0 117 aa5.93□□□□□ -1.46
CDC42SE2-210ENST00000506929 ATXN3LQ9H3M9 355 aa5.93□□□□□ -1.46
CDC42SE2-210ENST00000506929 U3KQE9 123 aa5.93□□□□□ -1.46
CDC42SE2-210ENST00000506929 WDR64B1ANS9 1081 aa5.92□□□□□ -1.46
CDC42SE2-210ENST00000506929 MED26O95402 600 aa5.92□□□□□ -1.46
CDC42SE2-210ENST00000506929 TGFB1P01137 390 aa5.92□□□□□ -1.46
CDC42SE2-210ENST00000506929 ZNF76P36508 570 aa5.92□□□□□ -1.46
CDC42SE2-210ENST00000506929 CRKP46108 304 aa5.92□□□□□ -1.46
CDC42SE2-210ENST00000506929 HDLBPQ00341 1268 aaKnown RBP5.92□□□□□ -1.46
CDC42SE2-210ENST00000506929 NKG7Q16617 165 aa5.92□□□□□ -1.46
CDC42SE2-210ENST00000506929 PAOXQ6QHF9 649 aa5.92□□□□□ -1.46
CDC42SE2-210ENST00000506929 NBPF11Q86T75 865 aa5.92□□□□□ -1.46
CDC42SE2-210ENST00000506929 RNF214Q8ND24 703 aa5.92□□□□□ -1.46
CDC42SE2-210ENST00000506929 KRTAP4-8Q9BYQ9 185 aa5.92□□□□□ -1.46
CDC42SE2-210ENST00000506929 PIDD1Q9HB75 910 aa5.92□□□□□ -1.46
CDC42SE2-210ENST00000506929 POLR3KQ9Y2Y1 108 aaPredicted RBP5.92□□□□□ -1.46
CDC42SE2-210ENST00000506929 PRR19A6NJB7 356 aa5.91□□□□□ -1.46
CDC42SE2-210ENST00000506929 GRIN3BO60391 1043 aa5.91□□□□□ -1.46
CDC42SE2-210ENST00000506929 COBLO75128 1261 aa5.91□□□□□ -1.46
CDC42SE2-210ENST00000506929 LMNB1P20700 586 aa5.91□□□□□ -1.46
CDC42SE2-210ENST00000506929 HOXA10P31260 410 aaPredicted RBP5.91□□□□□ -1.46
CDC42SE2-210ENST00000506929 GRK4P32298 578 aa5.91□□□□□ -1.46
CDC42SE2-210ENST00000506929 INTS5Q6P9B9 1019 aaKnown RBP5.91□□□□□ -1.46
CDC42SE2-210ENST00000506929 HS2ST1Q7LGA3 356 aa5.91□□□□□ -1.46
CDC42SE2-210ENST00000506929 GIMAP7Q8NHV1 300 aa5.91□□□□□ -1.46
CDC42SE2-210ENST00000506929 ZNF296Q8WUU4 475 aaPredicted RBP5.91□□□□□ -1.46
CDC42SE2-210ENST00000506929 TBC1D32Q96NH3 1257 aa5.91□□□□□ -1.46
CDC42SE2-210ENST00000506929 PCMTD2Q9NV79 361 aa5.91□□□□□ -1.46
CDC42SE2-210ENST00000506929 CILPO75339 1184 aa5.9□□□□□ -1.46
CDC42SE2-210ENST00000506929 VAMP1P23763 118 aa5.9□□□□□ -1.46
CDC42SE2-210ENST00000506929 SSTR4P31391 388 aa5.9□□□□□ -1.46
CDC42SE2-210ENST00000506929 EIF4A3P38919 411 aaKnown RBP5.9□□□□□ -1.46
CDC42SE2-210ENST00000506929 GRIK1P39086 918 aa5.9□□□□□ -1.46
CDC42SE2-210ENST00000506929 CD97P48960 835 aa5.9□□□□□ -1.46
CDC42SE2-210ENST00000506929 MAP7Q14244 749 aa5.9□□□□□ -1.46
CDC42SE2-210ENST00000506929 SNAP47Q5SQN1 464 aa5.9□□□□□ -1.46
CDC42SE2-210ENST00000506929 ZAR1Q86SH2 424 aa5.9□□□□□ -1.46
CDC42SE2-210ENST00000506929 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.9□□□□□ -1.46
CDC42SE2-210ENST00000506929 PSMG3-AS1Q96PY0 264 aa5.9□□□□□ -1.46
CDC42SE2-210ENST00000506929 DPH2Q9BQC3 489 aaPredicted RBP5.9□□□□□ -1.46
CDC42SE2-210ENST00000506929 SSU72Q9NP77 194 aaKnown RBP5.9□□□□□ -1.46
CDC42SE2-210ENST00000506929 PICK1Q9NRD5 415 aa5.9□□□□□ -1.46
CDC42SE2-210ENST00000506929 ATG3Q9NT62 314 aa5.9□□□□□ -1.46
CDC42SE2-210ENST00000506929 UBP1Q9NZI7 540 aa5.9□□□□□ -1.46
CDC42SE2-210ENST00000506929 CNTNAP4Q9C0A0 1308 aa5.9□□□□□ -1.47
CDC42SE2-210ENST00000506929 GREM1O60565 184 aa5.89□□□□□ -1.47
CDC42SE2-210ENST00000506929 RPL6Q02878 288 aaKnown RBP5.89□□□□□ -1.47
CDC42SE2-210ENST00000506929 SLBPQ14493 270 aaKnown RBP eCLIP5.89□□□□□ -1.47
CDC42SE2-210ENST00000506929 CPSF6Q16630 551 aaKnown RBP eCLIP5.89□□□□□ -1.47
CDC42SE2-210ENST00000506929 ZNF765Q7L2R6 523 aa5.89□□□□□ -1.47
CDC42SE2-210ENST00000506929 HDXQ7Z353 690 aa5.89□□□□□ -1.47
CDC42SE2-210ENST00000506929 RIN3Q8TB24 985 aa5.89□□□□□ -1.47
CDC42SE2-210ENST00000506929 GATAD2BQ8WXI9 593 aa5.89□□□□□ -1.47
CDC42SE2-210ENST00000506929 EAF1Q96JC9 268 aaPredicted RBP5.89□□□□□ -1.47
CDC42SE2-210ENST00000506929 WNT10AQ9GZT5 417 aa5.89□□□□□ -1.47
CDC42SE2-210ENST00000506929 PCOLCE2Q9UKZ9 415 aa5.89□□□□□ -1.47
CDC42SE2-210ENST00000506929 UPK3BL1B0FP48 263 aa5.88□□□□□ -1.47
CDC42SE2-210ENST00000506929 UPK3BL2E5RIL1 263 aa5.88□□□□□ -1.47
CDC42SE2-210ENST00000506929 SCAMP3O14828 347 aaKnown RBP5.88□□□□□ -1.47
CDC42SE2-210ENST00000506929 DNAJA2O60884 412 aa5.88□□□□□ -1.47
CDC42SE2-210ENST00000506929 FAM87AP0C7U9 286 aa5.88□□□□□ -1.47
CDC42SE2-210ENST00000506929 RLBP1P12271 317 aa5.88□□□□□ -1.47
CDC42SE2-210ENST00000506929 ETF1P62495 437 aaKnown RBP5.88□□□□□ -1.47
CDC42SE2-210ENST00000506929 SCARA3Q6AZY7 606 aa5.88□□□□□ -1.47
CDC42SE2-210ENST00000506929 FAM196AQ6ZSG2 479 aa5.88□□□□□ -1.47
CDC42SE2-210ENST00000506929 USP48Q86UV5 1035 aa5.88□□□□□ -1.47
CDC42SE2-210ENST00000506929 TOP6BLQ8N6T0 577 aa5.88□□□□□ -1.47
CDC42SE2-210ENST00000506929 XAGE3Q8WTP9 111 aa5.88□□□□□ -1.47
CDC42SE2-210ENST00000506929 RNF34Q969K3 372 aa5.88□□□□□ -1.47
CDC42SE2-210ENST00000506929 METTL22Q9BUU2 404 aaPredicted RBP5.88□□□□□ -1.47
CDC42SE2-210ENST00000506929 TJP2Q9UDY2 1190 aa5.88□□□□□ -1.47
CDC42SE2-210ENST00000506929 DDX41Q9UJV9 622 aaKnown RBP5.88□□□□□ -1.47
CDC42SE2-210ENST00000506929 SNCAIPQ9Y6H5 919 aa5.88□□□□□ -1.47
CDC42SE2-210ENST00000506929 KIAA1324LA8MWY0 1029 aaPredicted RBP5.87□□□□□ -1.47
CDC42SE2-210ENST00000506929 FANCGO15287 622 aa5.87□□□□□ -1.47
CDC42SE2-210ENST00000506929 NT5DC4Q86YG4 428 aa5.87□□□□□ -1.47
CDC42SE2-210ENST00000506929 OSBPL1AQ9BXW6 950 aa5.87□□□□□ -1.47
CDC42SE2-210ENST00000506929 BRMS1Q9HCU9 246 aa5.87□□□□□ -1.47
CDC42SE2-210ENST00000506929 KCNQ5Q9NR82 932 aa5.87□□□□□ -1.47
CDC42SE2-210ENST00000506929 PIM2Q9P1W9 311 aa5.87□□□□□ -1.47
CDC42SE2-210ENST00000506929 LEMD3Q9Y2U8 911 aa5.87□□□□□ -1.47
CDC42SE2-210ENST00000506929 ADAMTS4O75173 837 aa5.86□□□□□ -1.47
CDC42SE2-210ENST00000506929 PGRP06401 933 aa5.86□□□□□ -1.47
CDC42SE2-210ENST00000506929 RAD51AP2Q09MP3 1159 aa5.86□□□□□ -1.47
CDC42SE2-210ENST00000506929 SEZ6Q53EL9 994 aa5.86□□□□□ -1.47
CDC42SE2-210ENST00000506929 ARMCX6Q7L4S7 300 aa5.86□□□□□ -1.47
CDC42SE2-210ENST00000506929 FAM214BQ7L5A3 538 aa5.86□□□□□ -1.47
CDC42SE2-210ENST00000506929 CCDC84Q86UT8 332 aaPredicted RBP5.86□□□□□ -1.47
CDC42SE2-210ENST00000506929 FAM181AQ8N9Y4 354 aa5.86□□□□□ -1.47
CDC42SE2-210ENST00000506929 ZNF507Q8TCN5 953 aa5.86□□□□□ -1.47
CDC42SE2-210ENST00000506929 ACSF2Q96CM8 615 aaPredicted RBP5.86□□□□□ -1.47
CDC42SE2-210ENST00000506929 DUSP23Q9BVJ7 150 aa5.86□□□□□ -1.47
CDC42SE2-210ENST00000506929 LRRC4CQ9HCJ2 640 aa5.86□□□□□ -1.47
CDC42SE2-210ENST00000506929 METTL5Q9NRN9 209 aaKnown RBP5.86□□□□□ -1.47
CDC42SE2-210ENST00000506929 SLITRK5O94991 958 aa5.85□□□□□ -1.47
CDC42SE2-210ENST00000506929 TNNI2P48788 182 aa5.85□□□□□ -1.47
CDC42SE2-210ENST00000506929 CYP27A1Q02318 531 aa5.85□□□□□ -1.47
CDC42SE2-210ENST00000506929 CLCQ05315 142 aa5.85□□□□□ -1.47
CDC42SE2-210ENST00000506929 PWP1Q13610 501 aa5.85□□□□□ -1.47
CDC42SE2-210ENST00000506929 PRAMEF13Q5VWM6 474 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms