RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 AOC2O75106 756 aa5.24□□□□□ -1.57
TOPBP1-205ENST00000506779 FSHBP01225 129 aa5.24□□□□□ -1.57
TOPBP1-205ENST00000506779 PCDH1Q08174 1060 aa5.24□□□□□ -1.57
TOPBP1-205ENST00000506779 PEAR1Q5VY43 1037 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-205ENST00000506779 ZFYVE1Q9HBF4 777 aa5.24□□□□□ -1.57
TOPBP1-205ENST00000506779 ZFYVE28Q9HCC9 887 aa5.24□□□□□ -1.57
TOPBP1-205ENST00000506779 CCDC87Q9NVE4 849 aa5.24□□□□□ -1.57
TOPBP1-205ENST00000506779 A0A096LPE4 126 aa5.23□□□□□ -1.57
TOPBP1-205ENST00000506779 A0A1W2PPZ6 126 aa5.23□□□□□ -1.57
TOPBP1-205ENST00000506779 GRIN3BO60391 1043 aa5.23□□□□□ -1.57
TOPBP1-205ENST00000506779 NKPD1Q17RQ9 610 aa5.23□□□□□ -1.57
TOPBP1-205ENST00000506779 HHIPL2Q6UWX4 724 aa5.23□□□□□ -1.57
TOPBP1-205ENST00000506779 DDX54Q8TDD1 881 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-205ENST00000506779 TEPSINQ96N21 525 aa5.23□□□□□ -1.57
TOPBP1-205ENST00000506779 MCOLN1Q9GZU1 580 aa5.23□□□□□ -1.57
TOPBP1-205ENST00000506779 CLEC4MQ9H2X3 399 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-205ENST00000506779 LIN7BQ9HAP6 207 aa5.23□□□□□ -1.57
TOPBP1-205ENST00000506779 ECEL1O95672 775 aa5.22□□□□□ -1.57
TOPBP1-205ENST00000506779 CORO1BQ9BR76 489 aa5.22□□□□□ -1.57
TOPBP1-205ENST00000506779 PIDD1Q9HB75 910 aa5.22□□□□□ -1.57
TOPBP1-205ENST00000506779 BRPF3Q9ULD4 1205 aa5.22□□□□□ -1.57
TOPBP1-205ENST00000506779 A0A1W2PP55 124 aa5.21□□□□□ -1.58
TOPBP1-205ENST00000506779 CARNS1A5YM72 827 aa5.21□□□□□ -1.58
TOPBP1-205ENST00000506779 H3BRB1 525 aa5.21□□□□□ -1.58
TOPBP1-205ENST00000506779 RFXAPO00287 272 aa5.21□□□□□ -1.58
TOPBP1-205ENST00000506779 NEFLP07196 543 aa5.21□□□□□ -1.58
TOPBP1-205ENST00000506779 B4GALNT3Q6L9W6 998 aa5.21□□□□□ -1.58
TOPBP1-205ENST00000506779 FAM214BQ7L5A3 538 aa5.21□□□□□ -1.58
TOPBP1-205ENST00000506779 CCNJLQ8IV13 435 aa5.21□□□□□ -1.58
TOPBP1-205ENST00000506779 GALNT12Q8IXK2 581 aa5.21□□□□□ -1.58
TOPBP1-205ENST00000506779 SMYD4Q8IYR2 804 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-205ENST00000506779 WDR18Q9BV38 432 aa5.21□□□□□ -1.58
TOPBP1-205ENST00000506779 TUT1Q9H6E5 874 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-205ENST00000506779 SYNGAP1Q96PV0 1343 aa5.21□□□□□ -1.58
TOPBP1-205ENST00000506779 SEMA7AO75326 666 aa5.2□□□□□ -1.58
TOPBP1-205ENST00000506779 RAC2P15153 192 aa5.2□□□□□ -1.58
TOPBP1-205ENST00000506779 GRIA4P48058 902 aa5.2□□□□□ -1.58
TOPBP1-205ENST00000506779 PDE3AQ14432 1141 aa5.2□□□□□ -1.58
TOPBP1-205ENST00000506779 SPRED3Q2MJR0 410 aa5.2□□□□□ -1.58
TOPBP1-205ENST00000506779 PHLDB3Q6NSJ2 640 aa5.2□□□□□ -1.58
TOPBP1-205ENST00000506779 GLYCTKQ8IVS8 523 aa5.2□□□□□ -1.58
TOPBP1-205ENST00000506779 TOP6BLQ8N6T0 577 aa5.2□□□□□ -1.58
TOPBP1-205ENST00000506779 CCDC120Q96HB5 630 aa5.2□□□□□ -1.58
TOPBP1-205ENST00000506779 BDH2Q9BUT1 245 aa5.2□□□□□ -1.58
TOPBP1-205ENST00000506779 ADAM7Q9H2U9 754 aa5.2□□□□□ -1.58
TOPBP1-205ENST00000506779 MYOCOSA0A1B0GUC4 107 aa5.19□□□□□ -1.58
TOPBP1-205ENST00000506779 IGF2BP3O00425 579 aaKnown RBP eCLIP5.19□□□□□ -1.58
TOPBP1-205ENST00000506779 TMPRSS2O15393 492 aa5.19□□□□□ -1.58
TOPBP1-205ENST00000506779 NDUFB5O43674 189 aa5.19□□□□□ -1.58
TOPBP1-205ENST00000506779 CLCN7P51798 805 aa5.19□□□□□ -1.58
TOPBP1-205ENST00000506779 ZNF423Q2M1K9 1284 aa5.19□□□□□ -1.58
TOPBP1-205ENST00000506779 NPAS4Q8IUM7 802 aa5.19□□□□□ -1.58
TOPBP1-205ENST00000506779 TCF12Q99081 682 aa5.19□□□□□ -1.58
TOPBP1-205ENST00000506779 EHD4Q9H223 541 aa5.19□□□□□ -1.58
TOPBP1-205ENST00000506779 EGFL7Q9UHF1 273 aa5.19□□□□□ -1.58
TOPBP1-205ENST00000506779 MATN3O15232 486 aa5.18□□□□□ -1.58
TOPBP1-205ENST00000506779 ICMTO60725 284 aa5.18□□□□□ -1.58
TOPBP1-205ENST00000506779 B3GALT4O96024 378 aa5.18□□□□□ -1.58
TOPBP1-205ENST00000506779 SSPNQ14714 243 aa5.18□□□□□ -1.58
TOPBP1-205ENST00000506779 SLITRK6Q9H5Y7 841 aa5.18□□□□□ -1.58
TOPBP1-205ENST00000506779 ZNF576Q9H609 170 aa5.18□□□□□ -1.58
TOPBP1-205ENST00000506779 ATP13A1Q9HD20 1204 aa5.18□□□□□ -1.58
TOPBP1-205ENST00000506779 NPHS2Q9NP85 383 aa5.18□□□□□ -1.58
TOPBP1-205ENST00000506779 GTF2IRD1Q9UHL9 959 aa5.18□□□□□ -1.58
TOPBP1-205ENST00000506779 PALD1Q9ULE6 856 aa5.18□□□□□ -1.58
TOPBP1-205ENST00000506779 ZC3H12DA2A288 527 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-205ENST00000506779 PEX10O60683 326 aa5.17□□□□□ -1.58
TOPBP1-205ENST00000506779 CPNE3O75131 537 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-205ENST00000506779 PDE3BQ13370 1112 aa5.17□□□□□ -1.58
TOPBP1-205ENST00000506779 USPL1Q5W0Q7 1092 aa5.17□□□□□ -1.58
TOPBP1-205ENST00000506779 FANCD2OSQ96PS1 177 aa5.17□□□□□ -1.58
TOPBP1-205ENST00000506779 TRIM56Q9BRZ2 755 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-205ENST00000506779 ATXN3LQ9H3M9 355 aa5.17□□□□□ -1.58
TOPBP1-205ENST00000506779 GCM1Q9NP62 436 aa5.17□□□□□ -1.58
TOPBP1-205ENST00000506779 USTQ9Y2C2 406 aa5.17□□□□□ -1.58
TOPBP1-205ENST00000506779 GADD45BO75293 160 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-205ENST00000506779 SERPINB4P48594 390 aa5.16□□□□□ -1.58
TOPBP1-205ENST00000506779 HNRNPUQ00839 825 aaKnown RBP eCLIP5.16□□□□□ -1.58
TOPBP1-205ENST00000506779 AP3B2Q13367 1082 aa5.16□□□□□ -1.58
TOPBP1-205ENST00000506779 ORC1Q13415 861 aa5.16□□□□□ -1.58
TOPBP1-205ENST00000506779 KIAA0319Q5VV43 1072 aa5.16□□□□□ -1.58
TOPBP1-205ENST00000506779 TTC6Q86TZ1 520 aa5.16□□□□□ -1.58
TOPBP1-205ENST00000506779 SYT8Q8NBV8 401 aa5.16□□□□□ -1.58
TOPBP1-205ENST00000506779 TMC1Q8TDI8 760 aa5.16□□□□□ -1.58
TOPBP1-205ENST00000506779 PANK1Q8TE04 598 aa5.16□□□□□ -1.58
TOPBP1-205ENST00000506779 MYLIPQ8WY64 445 aa5.16□□□□□ -1.58
TOPBP1-205ENST00000506779 ALPK1Q96QP1 1244 aa5.16□□□□□ -1.58
TOPBP1-205ENST00000506779 MRIQ9BWK5 157 aa5.16□□□□□ -1.58
TOPBP1-205ENST00000506779 DISC1Q9NRI5 854 aa5.16□□□□□ -1.58
TOPBP1-205ENST00000506779 PCOLCE2Q9UKZ9 415 aa5.16□□□□□ -1.58
TOPBP1-205ENST00000506779 RNGTTO60942 597 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-205ENST00000506779 TGM1P22735 817 aa5.15□□□□□ -1.59
TOPBP1-205ENST00000506779 ITPKAP23677 461 aa5.15□□□□□ -1.59
TOPBP1-205ENST00000506779 ERVFC1P60507 584 aa5.15□□□□□ -1.59
TOPBP1-205ENST00000506779 CRB2Q5IJ48 1285 aa5.15□□□□□ -1.59
TOPBP1-205ENST00000506779 ZNF605Q86T29 641 aa5.15□□□□□ -1.59
TOPBP1-205ENST00000506779 SGPP1Q9BX95 441 aa5.15□□□□□ -1.59
TOPBP1-205ENST00000506779 SCAND2PQ9GZW5 306 aaPredicted RBP5.15□□□□□ -1.59
TOPBP1-205ENST00000506779 TEX51A0A1B0GUA7 166 aa5.14□□□□□ -1.59
TOPBP1-205ENST00000506779 SLC22A31A6NKX4 558 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms