RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 LAMB1P07942 1786 aa15.35■□□□□ 0.05
TCOF1-210ENST00000506767 PPP1R12BO60237 982 aaPredicted RBP15.35■□□□□ 0.05
TCOF1-210ENST00000506767 FGAP02671 866 aa15.35■□□□□ 0.05
TCOF1-210ENST00000506767 HLA-DOAP06340 250 aa15.35■□□□□ 0.05
TCOF1-210ENST00000506767 SLURP2P0DP57 97 aa15.35■□□□□ 0.05
TCOF1-210ENST00000506767 CYP2D6P10635 497 aa15.35■□□□□ 0.05
TCOF1-210ENST00000506767 EVX2Q03828 476 aa15.35■□□□□ 0.05
TCOF1-210ENST00000506767 GABPAQ06546 454 aa15.35■□□□□ 0.05
TCOF1-210ENST00000506767 CASC1Q6TDU7 716 aa15.35■□□□□ 0.05
TCOF1-210ENST00000506767 MOB2Q70IA6 237 aa15.35■□□□□ 0.05
TCOF1-210ENST00000506767 C2orf69Q8N8R5 385 aa15.35■□□□□ 0.05
TCOF1-210ENST00000506767 DNAJC18Q9H819 358 aa15.35■□□□□ 0.05
TCOF1-210ENST00000506767 HERC5Q9UII4 1024 aaKnown RBP15.35■□□□□ 0.05
TCOF1-210ENST00000506767 TAOK2Q9UL54 1235 aa15.35■□□□□ 0.05
TCOF1-210ENST00000506767 CYP2D7A0A087X1C5 515 aa15.34■□□□□ 0.05
TCOF1-210ENST00000506767 UNCXA6NJT0 531 aa15.34■□□□□ 0.05
TCOF1-210ENST00000506767 PHF20L1A8MW92 1017 aa15.34■□□□□ 0.05
TCOF1-210ENST00000506767 SMIM22K7EJ46 135 aa15.34■□□□□ 0.05
TCOF1-210ENST00000506767 TDO2P48775 406 aa15.34■□□□□ 0.05
TCOF1-210ENST00000506767 PRKG1Q13976 671 aa15.34■□□□□ 0.05
TCOF1-210ENST00000506767 SLC4A8Q2Y0W8 1093 aa15.34■□□□□ 0.05
TCOF1-210ENST00000506767 LDLRAD1Q5T700 205 aa15.34■□□□□ 0.05
TCOF1-210ENST00000506767 ARMC9Q7Z3E5 817 aa15.34■□□□□ 0.05
TCOF1-210ENST00000506767 SAPCD2Q86UD0 394 aa15.34■□□□□ 0.05
TCOF1-210ENST00000506767 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.34■□□□□ 0.05
TCOF1-210ENST00000506767 ZNF341Q9BYN7 854 aa15.34■□□□□ 0.05
TCOF1-210ENST00000506767 NAPBQ9H115 298 aa15.34■□□□□ 0.05
TCOF1-210ENST00000506767 CREBZFQ9NS37 354 aa15.34■□□□□ 0.05
TCOF1-210ENST00000506767 SERPINB13Q9UIV8 391 aa15.34■□□□□ 0.05
TCOF1-210ENST00000506767 ANGEL1Q9UNK9 670 aaKnown RBP15.34■□□□□ 0.05
TCOF1-210ENST00000506767 TLL2Q9Y6L7 1015 aa15.34■□□□□ 0.05
TCOF1-210ENST00000506767 PTH1RQ03431 593 aa15.33■□□□□ 0.04
TCOF1-210ENST00000506767 TATDN1Q6P1N9 297 aa15.33■□□□□ 0.04
TCOF1-210ENST00000506767 AMOTL1Q8IY63 956 aa15.33■□□□□ 0.04
TCOF1-210ENST00000506767 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.33■□□□□ 0.04
TCOF1-210ENST00000506767 ROBO3Q96MS0 1386 aa15.33■□□□□ 0.04
TCOF1-210ENST00000506767 OTOFQ9HC10 1997 aa15.33■□□□□ 0.04
TCOF1-210ENST00000506767 FAM196BA6NMK8 535 aa15.32■□□□□ 0.04
TCOF1-210ENST00000506767 UBE2Q2LH0YL09 131 aa15.32■□□□□ 0.04
TCOF1-210ENST00000506767 IREB2P48200 963 aaKnown RBP15.32■□□□□ 0.04
TCOF1-210ENST00000506767 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.32■□□□□ 0.04
TCOF1-210ENST00000506767 MAP4K1Q92918 833 aa15.32■□□□□ 0.04
TCOF1-210ENST00000506767 LSG1Q9H089 658 aaKnown RBP15.32■□□□□ 0.04
TCOF1-210ENST00000506767 ANAPC4Q9UJX5 808 aa15.32■□□□□ 0.04
TCOF1-210ENST00000506767 MINDY4BA8MYZ0 360 aa15.31■□□□□ 0.04
TCOF1-210ENST00000506767 SHMT1P34896 483 aa15.31■□□□□ 0.04
TCOF1-210ENST00000506767 MAP3K9P80192 1104 aa15.31■□□□□ 0.04
TCOF1-210ENST00000506767 PPARAQ07869 468 aa15.31■□□□□ 0.04
TCOF1-210ENST00000506767 TTLL12Q14166 644 aaPredicted RBP15.31■□□□□ 0.04
TCOF1-210ENST00000506767 RRP1BQ14684 758 aaKnown RBP15.31■□□□□ 0.04
TCOF1-210ENST00000506767 C16orf86Q6ZW13 317 aa15.31■□□□□ 0.04
TCOF1-210ENST00000506767 ANKRD13AQ8IZ07 590 aa15.31■□□□□ 0.04
TCOF1-210ENST00000506767 CRACR2BQ8N4Y2 399 aaPredicted RBP15.31■□□□□ 0.04
TCOF1-210ENST00000506767 DYNLL2Q96FJ2 89 aa15.31■□□□□ 0.04
TCOF1-210ENST00000506767 HHIPL1Q96JK4 782 aa15.31■□□□□ 0.04
TCOF1-210ENST00000506767 WRNIP1Q96S55 665 aa15.31■□□□□ 0.04
TCOF1-210ENST00000506767 SWAP70Q9UH65 585 aa15.31■□□□□ 0.04
TCOF1-210ENST00000506767 CTNND1O60716 968 aaKnown RBP15.3■□□□□ 0.04
TCOF1-210ENST00000506767 INPP5BP32019 993 aa15.3■□□□□ 0.04
TCOF1-210ENST00000506767 HUNKP57058 714 aa15.3■□□□□ 0.04
TCOF1-210ENST00000506767 LAMA4Q16363 1823 aa15.3■□□□□ 0.04
TCOF1-210ENST00000506767 NOL9Q5SY16 702 aaKnown RBP15.3■□□□□ 0.04
TCOF1-210ENST00000506767 JMYQ8N9B5 988 aa15.3■□□□□ 0.04
TCOF1-210ENST00000506767 CTNNA3Q9UI47 895 aa15.3■□□□□ 0.04
TCOF1-210ENST00000506767 RASSF10A6NK89 507 aa15.29■□□□□ 0.04
TCOF1-210ENST00000506767 FGRP09769 529 aa15.29■□□□□ 0.04
TCOF1-210ENST00000506767 CDK8P49336 464 aa15.29■□□□□ 0.04
TCOF1-210ENST00000506767 VGLL4Q14135 290 aa15.29■□□□□ 0.04
TCOF1-210ENST00000506767 KIAA1211Q6ZU35 1233 aa15.29■□□□□ 0.04
TCOF1-210ENST00000506767 SLC44A5Q8NCS7 719 aa15.29■□□□□ 0.04
TCOF1-210ENST00000506767 ZKSCAN4Q969J2 545 aaPredicted RBP15.29■□□□□ 0.04
TCOF1-210ENST00000506767 TRIM34Q9BYJ4 488 aa15.29■□□□□ 0.04
TCOF1-210ENST00000506767 NBPF3Q9H094 633 aa15.29■□□□□ 0.04
TCOF1-210ENST00000506767 ABT1Q9ULW3 272 aaKnown RBP15.29■□□□□ 0.04
TCOF1-210ENST00000506767 TACC3Q9Y6A5 838 aa15.29■□□□□ 0.04
TCOF1-210ENST00000506767 SNCAIPQ9Y6H5 919 aa15.29■□□□□ 0.04
TCOF1-210ENST00000506767 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
TCOF1-210ENST00000506767 ZNF213O14771 459 aa15.28■□□□□ 0.04
TCOF1-210ENST00000506767 CAP2P40123 477 aa15.28■□□□□ 0.04
TCOF1-210ENST00000506767 JAG1P78504 1218 aa15.28■□□□□ 0.04
TCOF1-210ENST00000506767 CTDSPL2Q05D32 466 aa15.28■□□□□ 0.04
TCOF1-210ENST00000506767 RGMBQ6NW40 437 aa15.28■□□□□ 0.04
TCOF1-210ENST00000506767 SCYL3Q8IZE3 742 aa15.28■□□□□ 0.04
TCOF1-210ENST00000506767 CLMNQ96JQ2 1002 aa15.28■□□□□ 0.04
TCOF1-210ENST00000506767 ANO2Q9NQ90 1003 aa15.28■□□□□ 0.04
TCOF1-210ENST00000506767 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.28■□□□□ 0.04
TCOF1-210ENST00000506767 DOCK1Q14185 1865 aa15.28■□□□□ 0.04
TCOF1-210ENST00000506767 ATAD5Q96QE3 1844 aa15.28■□□□□ 0.04
TCOF1-210ENST00000506767 MYH8P13535 1937 aa15.27■□□□□ 0.04
TCOF1-210ENST00000506767 EPB41L2O43491 1005 aaKnown RBP15.27■□□□□ 0.04
TCOF1-210ENST00000506767 SLC3A2P08195 630 aaKnown RBP15.27■□□□□ 0.04
TCOF1-210ENST00000506767 NECTIN1Q15223 517 aa15.27■□□□□ 0.04
TCOF1-210ENST00000506767 IMMTQ16891 758 aaKnown RBP15.27■□□□□ 0.04
TCOF1-210ENST00000506767 DEFB115Q30KQ5 88 aa15.27■□□□□ 0.04
TCOF1-210ENST00000506767 CERKLQ49MI3 558 aaPredicted RBP15.27■□□□□ 0.04
TCOF1-210ENST00000506767 GINM1Q9NU53 330 aa15.27■□□□□ 0.04
TCOF1-210ENST00000506767 RBM8AQ9Y5S9 174 aaKnown RBP15.27■□□□□ 0.04
TCOF1-210ENST00000506767 CSADQ9Y600 493 aa15.27■□□□□ 0.04
TCOF1-210ENST00000506767 REC8O95072 547 aa15.26■□□□□ 0.03
TCOF1-210ENST00000506767 CYP21A2P08686 494 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms