RNA–Protein interactions for RNA: ENST00000506611.1

TRIO-208, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-208ENST00000506611 SSU72Q9NP77 194 aaKnown RBP7.5□□□□□ -1.21
TRIO-208ENST00000506611 PLAGL2Q9UPG8 496 aa7.5□□□□□ -1.21
TRIO-208ENST00000506611 FANCGO15287 622 aa7.49□□□□□ -1.21
TRIO-208ENST00000506611 CD96P40200 585 aa7.49□□□□□ -1.21
TRIO-208ENST00000506611 DAB2P98082 770 aa7.49□□□□□ -1.21
TRIO-208ENST00000506611 SEPT6Q14141 434 aa7.49□□□□□ -1.21
TRIO-208ENST00000506611 CCDC85BQ15834 202 aaPredicted RBP7.49□□□□□ -1.21
TRIO-208ENST00000506611 RB1CC1Q8TDY2 1594 aa7.49□□□□□ -1.21
TRIO-208ENST00000506611 PRAMEF27A3QJZ7 478 aa7.48□□□□□ -1.21
TRIO-208ENST00000506611 TP53INP2Q8IXH6 220 aa7.48□□□□□ -1.21
TRIO-208ENST00000506611 FBXL18Q96ME1 805 aa7.48□□□□□ -1.21
TRIO-208ENST00000506611 EOMESO95936 686 aa7.47□□□□□ -1.21
TRIO-208ENST00000506611 LIG3P49916 1009 aa7.47□□□□□ -1.21
TRIO-208ENST00000506611 SLBPQ14493 270 aaKnown RBP eCLIP7.47□□□□□ -1.21
TRIO-208ENST00000506611 MAP3K11Q16584 847 aa7.47□□□□□ -1.21
TRIO-208ENST00000506611 NKG7Q16617 165 aa7.47□□□□□ -1.21
TRIO-208ENST00000506611 NETO1Q8TDF5 533 aa7.47□□□□□ -1.21
TRIO-208ENST00000506611 ELMO3Q96BJ8 720 aa7.47□□□□□ -1.21
TRIO-208ENST00000506611 PRDM10Q9NQV6 1147 aa7.47□□□□□ -1.21
TRIO-208ENST00000506611 CNTNAP4Q9C0A0 1308 aa7.47□□□□□ -1.21
TRIO-208ENST00000506611 CEACAM5P06731 702 aa7.46□□□□□ -1.22
TRIO-208ENST00000506611 TFE3P19532 575 aaPredicted RBP7.46□□□□□ -1.22
TRIO-208ENST00000506611 RPS26P62854 115 aaKnown RBP7.46□□□□□ -1.22
TRIO-208ENST00000506611 WIPI1Q5MNZ9 446 aaPredicted RBP7.46□□□□□ -1.22
TRIO-208ENST00000506611 AGMOQ6ZNB7 445 aa7.46□□□□□ -1.22
TRIO-208ENST00000506611 ARMCX6Q7L4S7 300 aa7.46□□□□□ -1.22
TRIO-208ENST00000506611 TMC4Q7Z404 712 aa7.46□□□□□ -1.22
TRIO-208ENST00000506611 KRTAP19-1Q8IUB9 90 aa7.46□□□□□ -1.22
TRIO-208ENST00000506611 MKNK2Q9HBH9 465 aa7.46□□□□□ -1.22
TRIO-208ENST00000506611 PICK1Q9NRD5 415 aa7.46□□□□□ -1.22
TRIO-208ENST00000506611 GFRA2O00451 464 aa7.45□□□□□ -1.22
TRIO-208ENST00000506611 SLITRK5O94991 958 aa7.45□□□□□ -1.22
TRIO-208ENST00000506611 CD8BP10966 210 aa7.45□□□□□ -1.22
TRIO-208ENST00000506611 WNT10AQ9GZT5 417 aa7.45□□□□□ -1.22
TRIO-208ENST00000506611 TNKS2Q9H2K2 1166 aa7.45□□□□□ -1.22
TRIO-208ENST00000506611 SLC5A6Q9Y289 635 aa7.45□□□□□ -1.22
TRIO-208ENST00000506611 TLR6Q9Y2C9 796 aa7.45□□□□□ -1.22
TRIO-208ENST00000506611 ITIH2P19823 946 aa7.44□□□□□ -1.22
TRIO-208ENST00000506611 PSMD2Q13200 908 aa7.44□□□□□ -1.22
TRIO-208ENST00000506611 IFI16Q16666 785 aaKnown RBP7.44□□□□□ -1.22
TRIO-208ENST00000506611 FMNL2Q96PY5 1086 aa7.44□□□□□ -1.22
TRIO-208ENST00000506611 GZF1Q9H116 711 aaPredicted RBP7.44□□□□□ -1.22
TRIO-208ENST00000506611 F6X3S4 739 aa7.43□□□□□ -1.22
TRIO-208ENST00000506611 FGD1P98174 961 aa7.43□□□□□ -1.22
TRIO-208ENST00000506611 NKPD1Q17RQ9 610 aa7.43□□□□□ -1.22
TRIO-208ENST00000506611 HDXQ7Z353 690 aa7.43□□□□□ -1.22
TRIO-208ENST00000506611 SPACA3Q8IXA5 215 aa7.43□□□□□ -1.22
TRIO-208ENST00000506611 ZNF507Q8TCN5 953 aa7.43□□□□□ -1.22
TRIO-208ENST00000506611 ADAMTS6Q9UKP5 1117 aa7.43□□□□□ -1.22
TRIO-208ENST00000506611 SNCAIPQ9Y6H5 919 aa7.43□□□□□ -1.22
TRIO-208ENST00000506611 USP31Q70CQ4 1352 aa7.43□□□□□ -1.22
TRIO-208ENST00000506611 IGF2BP3O00425 579 aaKnown RBP eCLIP7.42□□□□□ -1.22
TRIO-208ENST00000506611 LRIG2O94898 1065 aa7.42□□□□□ -1.22
TRIO-208ENST00000506611 ITGB5P18084 799 aa7.42□□□□□ -1.22
TRIO-208ENST00000506611 GRK4P32298 578 aa7.42□□□□□ -1.22
TRIO-208ENST00000506611 ST13P50502 369 aaKnown RBP7.42□□□□□ -1.22
TRIO-208ENST00000506611 PRKCQQ04759 706 aa7.42□□□□□ -1.22
TRIO-208ENST00000506611 TAF1CQ15572 869 aaPredicted RBP7.42□□□□□ -1.22
TRIO-208ENST00000506611 CDC37L1Q7L3B6 337 aa7.42□□□□□ -1.22
TRIO-208ENST00000506611 STK11IPQ8N1F8 1099 aa7.42□□□□□ -1.22
TRIO-208ENST00000506611 AGBL5Q8NDL9 886 aa7.42□□□□□ -1.22
TRIO-208ENST00000506611 PHC3Q8NDX5 983 aa7.42□□□□□ -1.22
TRIO-208ENST00000506611 RIN3Q8TB24 985 aa7.42□□□□□ -1.22
TRIO-208ENST00000506611 MISP3Q96FF7 219 aa7.42□□□□□ -1.22
TRIO-208ENST00000506611 VAV3Q9UKW4 847 aa7.42□□□□□ -1.22
TRIO-208ENST00000506611 NACADO15069 1562 aa7.42□□□□□ -1.22
TRIO-208ENST00000506611 PRR33A8MZF0 331 aa7.41□□□□□ -1.22
TRIO-208ENST00000506611 FUT4P22083 530 aa7.41□□□□□ -1.22
TRIO-208ENST00000506611 CAP2P40123 477 aa7.41□□□□□ -1.22
TRIO-208ENST00000506611 AOC3Q16853 763 aa7.41□□□□□ -1.22
TRIO-208ENST00000506611 ZNF792Q3KQV3 632 aa7.41□□□□□ -1.22
TRIO-208ENST00000506611 KCT2Q8NC54 265 aa7.41□□□□□ -1.22
TRIO-208ENST00000506611 NOC4LQ9BVI4 516 aaKnown RBP7.41□□□□□ -1.22
TRIO-208ENST00000506611 PAX4O43316 350 aa7.4□□□□□ -1.22
TRIO-208ENST00000506611 ETF1P62495 437 aaKnown RBP7.4□□□□□ -1.22
TRIO-208ENST00000506611 XPCQ01831 940 aaPredicted RBP7.4□□□□□ -1.22
TRIO-208ENST00000506611 PLCL1Q15111 1095 aa7.4□□□□□ -1.22
TRIO-208ENST00000506611 CCDC27Q2M243 656 aa7.4□□□□□ -1.22
TRIO-208ENST00000506611 HRASLS5Q96KN8 279 aa7.4□□□□□ -1.22
TRIO-208ENST00000506611 FOXQ1Q9C009 403 aa7.4□□□□□ -1.22
TRIO-208ENST00000506611 MBNL3Q9NUK0 354 aaKnown RBP7.4□□□□□ -1.22
TRIO-208ENST00000506611 PAPLNO95428 1278 aa7.39□□□□□ -1.23
TRIO-208ENST00000506611 RNASE1P07998 156 aaKnown RBP7.39□□□□□ -1.23
TRIO-208ENST00000506611 PRAMEF13Q5VWM6 474 aa7.39□□□□□ -1.23
TRIO-208ENST00000506611 ARHGAP27Q6ZUM4 889 aa7.39□□□□□ -1.23
TRIO-208ENST00000506611 CRELD1Q96HD1 420 aa7.39□□□□□ -1.23
TRIO-208ENST00000506611 MIPEPQ99797 713 aa7.39□□□□□ -1.23
TRIO-208ENST00000506611 MIR1-1HGQ9H1L0 117 aa7.39□□□□□ -1.23
TRIO-208ENST00000506611 TJP2Q9UDY2 1190 aa7.39□□□□□ -1.23
TRIO-208ENST00000506611 GTF2IRD1Q9UHL9 959 aa7.39□□□□□ -1.23
TRIO-208ENST00000506611 TMEM265A0A087WTH1 108 aa7.38□□□□□ -1.23
TRIO-208ENST00000506611 BNC2Q6ZN30 1099 aaPredicted RBP7.38□□□□□ -1.23
TRIO-208ENST00000506611 HID1Q8IV36 788 aa7.38□□□□□ -1.23
TRIO-208ENST00000506611 DPH2Q9BQC3 489 aaPredicted RBP7.38□□□□□ -1.23
TRIO-208ENST00000506611 PRDM5Q9NQX1 630 aaPredicted RBP7.38□□□□□ -1.23
TRIO-208ENST00000506611 MAPK8IP1Q9UQF2 711 aa7.38□□□□□ -1.23
TRIO-208ENST00000506611 RNF114Q9Y508 228 aa7.38□□□□□ -1.23
TRIO-208ENST00000506611 SORBS3O60504 671 aa7.37□□□□□ -1.23
TRIO-208ENST00000506611 CST3P01034 146 aaPredicted RBP7.37□□□□□ -1.23
TRIO-208ENST00000506611 TSNAXIP1Q2TAA8 658 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms